Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 0.0e+00 1219.1 606 100.0
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 0.0e+00 1089.7 603 89.6
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 0.0e+00 1088.6 603 89.2
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 8.9e-297 1023.1 604 83.4
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 2.7e-285 984.9 604 80.0
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.2e-280 969.5 604 78.8
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 4.9e-279 964.1 605 77.4
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 1.1e-270 936.4 604 76.3
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 1.4e-270 936.0 604 75.8
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 5.4e-270 934.1 603 74.0
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.2e-269 932.9 603 74.6
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 2.7e-269 931.8 604 76.0
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 1.0e-268 929.9 603 74.5
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.3e-268 929.5 604 75.8
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.3e-268 928.7 604 76.0
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 3.0e-268 928.3 602 74.6
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 3.9e-268 927.9 604 74.5
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.9e-268 927.9 602 76.1
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 5.1e-268 927.5 605 74.4
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 5.1e-268 927.5 601 74.7
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 2.5e-267 925.2 603 74.1
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 4.3e-267 924.5 604 74.5
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 7.3e-267 923.7 605 74.2
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.2e-266 922.9 604 75.3
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 2.1e-266 922.2 604 74.0
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 1.4e-265 919.5 620 74.0
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 2.4e-265 918.7 606 73.8
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.2e-265 917.5 604 73.2
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 6.8e-265 917.1 603 74.0
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 8.9e-265 916.8 607 74.8
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 1.2e-264 916.4 604 74.3
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 4.9e-263 911.0 605 74.5
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 4.9e-263 911.0 604 73.3
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 6.4e-263 910.6 605 71.7
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 6.4e-263 910.6 603 71.8
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 1.1e-262 909.8 603 72.6
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 1.1e-262 909.8 603 72.0
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 1.9e-262 909.1 601 74.0
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 3.2e-262 908.3 604 73.2
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 2.1e-261 905.6 605 72.7
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 2.1e-261 905.6 604 73.2
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 1.0e-260 903.3 604 71.5
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 2.3e-260 902.1 604 71.5
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 8.7e-260 900.2 604 71.0
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 8.7e-260 900.2 604 71.9
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 1.9e-259 899.0 603 71.8
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.9e-259 899.0 602 72.3
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 4.3e-259 897.9 606 72.4
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 5.6e-259 897.5 602 73.1
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 1.3e-258 896.3 603 70.6
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 2.1e-258 895.6 605 71.2
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.1e-257 893.3 604 72.5
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 3.1e-257 891.7 605 71.1
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 6.9e-257 890.6 604 71.9
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 9.9e-256 886.7 603 72.3
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 6.4e-255 884.0 605 72.1
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 1.1e-254 883.2 604 71.5
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 1.9e-254 882.5 604 71.7
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 5.4e-254 880.9 605 71.6
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 7.1e-254 880.6 591 72.1
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 1.6e-253 879.4 605 70.9
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 2.1e-253 879.0 605 71.7
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 3.5e-253 878.2 603 72.0
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 3.5e-253 878.2 607 71.7
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 7.8e-253 877.1 605 71.1
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 1.7e-252 875.9 604 71.5
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 1.7e-252 875.9 606 70.8
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 3.9e-252 874.8 602 70.8
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 5.1e-252 874.4 615 69.4
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 1.9e-251 872.5 605 70.4
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 4.3e-251 871.3 604 70.9
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 1.6e-250 869.4 606 70.8
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 3.6e-250 868.2 603 70.0
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 4.0e-249 864.8 602 70.8
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 1.2e-248 863.2 603 70.6
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 2.6e-248 862.1 607 69.4
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 5.8e-248 860.9 603 69.8
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 7.6e-248 860.5 603 70.3
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 1.3e-247 859.8 603 69.7
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 1.9e-246 855.9 606 70.0
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 3.2e-246 855.1 609 70.3
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 7.9e-245 850.5 608 67.9
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 3.4e-240 835.1 609 67.2
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 1.0e-239 833.6 608 67.8
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 1.7e-239 832.8 608 67.8
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 2.2e-239 832.4 607 67.2
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 2.9e-239 832.0 608 67.9
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 1.6e-237 826.2 603 68.0
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 6.7e-236 820.8 608 67.1
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 1.9e-235 819.3 608 66.9
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 1.3e-231 806.6 666 61.9
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 4.2e-230 801.6 604 66.2
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 6.7e-228 794.3 470 80.9
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 6.3e-226 787.7 603 65.5
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 3.6e-221 771.9 728 56.0
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 2.3e-220 769.2 553 68.5
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.7e-207 726.5 470 74.5
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 8.0e-205 717.6 604 61.3
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 1.7e-202 709.9 699 51.1
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 1.4e-201 706.8 617 59.3
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 1.4e-201 706.8 701 51.4
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 5.0e-199 698.4 765 49.5
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 6.1e-197 691.4 800 46.8
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 4.0e-196 688.7 619 57.7
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 3.0e-188 662.5 602 57.8
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 6.8e-180 634.8 397 77.3
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 3.7e-178 629.0 612 52.8
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 5.9e-176 621.7 423 72.1
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 1.7e-175 620.2 405 73.3
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 5.0e-167 592.0 542 57.4
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 5.4e-153 545.4 509 55.0
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.9e-129 467.2 364 65.1
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 1.6e-125 454.1 311 69.8
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.6e-115 420.2 397 57.4
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 1.8e-111 407.5 264 75.4
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 2.0e-102 377.5 342 55.8
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 1.9e-89 334.3 215 76.7
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.8e-84 317.8 339 50.1
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 1.7e-82 311.2 555 38.9
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 2.7e-80 303.9 191 75.4
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 8.9e-63 245.7 148 76.4
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.1e-41 175.6 139 62.6
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 8.9e-39 166.0 319 35.4
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 3.5e-27 127.5 74 77.0
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.5e-09 68.2 47 63.8
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.6e-06 58.2 52 53.8
Potri.001G289250 Populus trichocarpa HOM05D005975 ORTHO05D007373 5.8e-06 57.0 48 58.3


User provided reference genes

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