Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 3.0e-75 285.4 178 100.0
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 2.0e-47 193.0 168 75.6
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 8.7e-43 177.6 177 57.6
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 5.3e-40 168.3 179 53.6
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 3.8e-38 162.2 177 51.4
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.1e-37 160.6 160 73.8
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 1.1e-37 160.6 177 67.8
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 4.2e-37 158.7 160 73.1
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 4.2e-37 158.7 167 71.3
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 9.3e-37 157.5 178 49.4
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 3.5e-36 155.6 160 73.1
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 3.5e-36 155.6 177 61.0
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 6.0e-36 154.8 177 67.8
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 7.9e-36 154.5 177 65.5
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 1.8e-35 153.3 178 47.8
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 2.3e-35 152.9 177 65.0
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 3.9e-35 152.1 178 47.2
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 3.9e-35 152.1 178 47.2
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 3.9e-35 152.1 177 64.4
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 3.9e-35 152.1 177 67.2
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 6.7e-35 151.4 177 62.7
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 6.7e-35 151.4 177 65.5
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 8.7e-35 151.0 179 64.2
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 1.1e-34 150.6 177 63.8
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.1e-34 150.6 177 65.5
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 1.1e-34 150.6 180 64.4
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 1.9e-34 149.8 179 62.6
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 1.9e-34 149.8 181 64.6
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 1.9e-34 149.8 177 66.7
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 2.5e-34 149.4 179 63.7
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 2.5e-34 149.4 200 45.5
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 3.3e-34 149.1 177 63.8
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 3.3e-34 149.1 177 66.7
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 4.3e-34 148.7 179 64.8
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 4.3e-34 148.7 177 65.5
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 4.3e-34 148.7 177 65.5
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 5.7e-34 148.3 179 64.8
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 5.7e-34 148.3 177 66.1
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 5.7e-34 148.3 177 66.1
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 7.4e-34 147.9 177 66.1
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 7.4e-34 147.9 177 66.1
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 9.7e-34 147.5 177 63.3
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 9.7e-34 147.5 181 63.5
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 9.7e-34 147.5 177 65.5
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 9.7e-34 147.5 177 65.5
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 1.3e-33 147.1 177 63.8
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 2.2e-33 146.4 179 63.1
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 2.2e-33 146.4 175 66.9
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.8e-33 146.0 177 65.5
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 3.7e-33 145.6 179 63.7
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 4.8e-33 145.2 177 65.0
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 4.8e-33 145.2 179 64.2
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 4.8e-33 145.2 177 64.4
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 6.3e-33 144.8 177 65.5
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 6.3e-33 144.8 179 62.6
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 6.3e-33 144.8 89 75.3
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 6.3e-33 144.8 177 63.8
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 8.2e-33 144.4 179 59.8
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 8.2e-33 144.4 177 65.0
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 8.2e-33 144.4 177 66.1
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 1.1e-32 144.1 177 64.4
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 1.4e-32 143.7 177 62.1
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 1.4e-32 143.7 89 77.5
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 1.4e-32 143.7 177 64.4
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 1.8e-32 143.3 177 64.4
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 1.8e-32 143.3 177 63.8
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 2.4e-32 142.9 181 63.0
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 3.1e-32 142.5 177 63.8
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 4.1e-32 142.1 89 74.2
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 4.1e-32 142.1 177 63.8
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 5.3e-32 141.7 89 76.4
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 6.9e-32 141.4 177 63.8
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 1.2e-31 140.6 179 63.1
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 1.2e-31 140.6 89 75.3
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 1.5e-31 140.2 177 63.8
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 1.5e-31 140.2 177 63.8
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 1.5e-31 140.2 86 79.1
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.5e-31 140.2 177 63.3
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 2.0e-31 139.8 179 63.7
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 2.0e-31 139.8 89 71.9
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 2.0e-31 139.8 177 65.0
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 2.6e-31 139.4 177 62.7
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 2.6e-31 139.4 132 54.5
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 3.4e-31 139.0 177 63.3
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 5.9e-31 138.3 84 78.6
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 1.3e-30 137.1 83 80.7
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 1.3e-30 137.1 86 76.7
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 5.0e-30 135.2 84 77.4
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 5.0e-30 135.2 89 74.2
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 6.5e-30 134.8 177 63.3
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 6.5e-30 134.8 86 74.4
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 1.1e-29 134.0 181 44.2
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 1.1e-29 134.0 209 52.2
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 1.6e-28 130.2 86 72.1
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 2.1e-28 129.8 82 75.6
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 2.1e-28 129.8 178 43.8
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 1.0e-27 127.5 86 73.3
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 1.8e-27 126.7 77 79.2
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 1.8e-27 126.7 180 42.2
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 3.0e-27 125.9 80 77.5
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 2.2e-25 119.8 76 77.6
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 1.1e-24 117.5 165 45.5
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 2.4e-24 116.3 197 55.3
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 6.9e-24 114.8 140 62.1
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 6.9e-24 114.8 77 71.4
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 1.2e-23 114.0 89 60.7
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 3.4e-23 112.5 75 74.7
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 7.7e-23 111.3 177 42.9
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 2.2e-22 109.8 173 41.6
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 1.2e-20 104.0 145 63.4
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 8.8e-19 97.8 140 60.0
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.6e-18 96.3 140 62.9
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 9.1e-16 87.8 125 61.6
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.1e-12 76.6 217 30.4
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 4.7e-12 75.5 118 39.0
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 1.4e-11 73.9 125 36.0
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 8.8e-11 71.2 128 32.8
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 3.3e-10 69.3 83 44.6
CAN.G935.5 Capsicum annuum HOM05D006436 ORTHO05D008011 7.7e-07 58.2 32 87.5
QL03p022571 Quercus lobata HOM05D006436 ORTHO05D008011 3.8e-06 55.8 34 76.5


User provided reference genes

Program Settings