Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 2.4e-73 279.3 198 100.0
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 4.8e-42 175.3 199 75.4
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 6.3e-42 174.9 198 75.3
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 6.1e-37 158.3 198 71.7
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 6.5e-31 138.3 166 75.3
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 4.2e-30 135.6 187 66.3
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 5.5e-30 135.2 176 67.0
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.6e-29 133.7 163 73.0
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.1e-29 133.3 166 73.5
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 2.3e-28 129.8 195 66.7
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 1.5e-27 127.1 166 71.1
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 2.0e-27 126.7 163 71.2
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 3.3e-27 125.9 168 71.4
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 4.4e-27 125.6 163 71.8
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 5.7e-27 125.2 168 71.4
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 5.7e-27 125.2 178 69.7
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 7.5e-27 124.8 197 64.0
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 9.7e-27 124.4 167 70.7
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 1.3e-26 124.0 158 72.8
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 1.3e-26 124.0 149 75.2
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 1.7e-26 123.6 162 71.0
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 2.2e-26 123.2 195 63.1
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 2.8e-26 122.9 136 80.9
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 2.8e-26 122.9 203 64.0
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 2.8e-26 122.9 177 67.8
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 2.8e-26 122.9 166 72.9
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 3.7e-26 122.5 203 64.0
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 3.7e-26 122.5 143 72.7
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 3.7e-26 122.5 166 71.7
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 4.8e-26 122.1 162 69.8
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 4.8e-26 122.1 203 64.0
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 6.3e-26 121.7 161 68.3
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.1e-25 120.9 198 60.6
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.1e-25 120.9 136 80.1
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 1.8e-25 120.2 195 62.6
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.8e-25 120.2 120 91.7
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 3.1e-25 119.4 151 74.8
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 7.0e-25 118.2 163 70.6
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 7.0e-25 118.2 198 60.1
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 1.6e-24 117.1 162 68.5
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 1.6e-24 117.1 202 63.9
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 2.0e-24 116.7 203 60.6
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 1.0e-23 114.4 151 72.2
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.3e-23 114.0 166 67.5
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 1.7e-23 113.6 198 61.6
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 1.7e-23 113.6 163 69.9
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 3.8e-23 112.5 162 67.9
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 5.0e-23 112.1 164 67.1
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 5.0e-23 112.1 164 68.3
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 5.0e-23 112.1 197 58.4
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 6.5e-23 111.7 158 70.3
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 1.5e-22 110.5 163 64.4
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 4.2e-22 109.0 159 70.4
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 5.5e-22 108.6 164 67.1
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 5.5e-22 108.6 164 67.1
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 5.5e-22 108.6 164 67.1
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 9.4e-22 107.8 166 67.5
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 9.4e-22 107.8 157 68.8
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 1.6e-21 107.1 164 66.5
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.6e-21 107.1 166 69.3
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 6.1e-21 105.1 164 65.9
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 8.0e-21 104.8 122 82.0
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 1.0e-20 104.4 174 62.6
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 2.3e-20 103.2 143 70.6
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 4.0e-20 102.4 130 79.2
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 4.0e-20 102.4 195 61.0
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 2.6e-19 99.8 168 66.1
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 5.7e-19 98.6 164 62.8
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 1.7e-18 97.1 164 64.0
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 1.7e-18 97.1 173 60.7
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 1.7e-18 97.1 166 60.2
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 2.2e-18 96.7 159 65.4
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 2.2e-18 96.7 177 60.5
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 2.8e-18 96.3 164 64.6
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 2.8e-18 96.3 152 67.1
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 3.7e-18 95.9 164 62.8
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 3.7e-18 95.9 198 59.1
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 4.8e-18 95.5 175 62.3
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 4.8e-18 95.5 163 66.3
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 8.3e-18 94.7 127 76.4
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 1.1e-17 94.4 169 63.3
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 1.1e-17 94.4 184 61.4
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 1.4e-17 94.0 125 76.8
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.4e-17 94.0 125 76.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.8e-17 93.6 148 68.2
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 2.4e-17 93.2 163 67.5
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 2.4e-17 93.2 195 59.0
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 2.4e-17 93.2 150 65.3
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.1e-17 92.8 127 75.6
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.6e-16 90.5 164 62.8
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.6e-16 90.5 195 59.5
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 2.2e-15 86.7 164 61.6
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 2.9e-15 86.3 164 62.2
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 5.0e-15 85.5 163 61.3
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 5.0e-15 85.5 158 61.4
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 6.5e-15 85.1 164 59.1
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 8.5e-15 84.7 64 73.4
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 8.5e-15 84.7 163 64.4
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.5e-14 84.0 153 60.8
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 4.2e-14 82.4 64 70.3
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 5.5e-14 82.0 130 63.1
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.2e-13 80.9 142 41.5
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 1.2e-13 80.9 148 58.1
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 2.7e-13 79.7 158 60.1
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 1.8e-12 77.0 165 58.8
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 4.0e-12 75.9 148 56.1
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 3.7e-10 69.3 121 71.1
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 4.5e-08 62.4 54 64.8
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 7.7e-08 61.6 121 67.8


User provided reference genes

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