Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10984 Beta vulgaris HOM05D001690 ORTHO05D009096 1.9e-66 255.8 131 100.0
EL10Ac6g14125 Beta vulgaris HOM05D001690 ORTHO05D009096 2.8e-38 162.2 112 79.5
EL10Ac5g11364 Beta vulgaris HOM05D001690 ORTHO05D009096 1.1e-29 133.7 93 77.4
AUR62026581 Chenopodium quinoa HOM05D001690 ORTHO05D009096 7.6e-28 127.5 105 64.8
AUR62039406 Chenopodium quinoa HOM05D001690 ORTHO05D009096 6.4e-27 124.4 105 63.8
GSVIVG01020171001 Vitis vinifera HOM05D001690 ORTHO05D009096 5.5e-26 121.3 75 74.7
Hund25316 Selenicereus undatus HOM05D001690 ORTHO05D009096 2.1e-25 119.4 75 77.3
Ah.03g132370 Amaranthus hybridus HOM05D000337 ORTHO05D000297 3.5e-25 118.6 73 76.7
Hund05955 Selenicereus undatus HOM05D001690 ORTHO05D009096 6.0e-25 117.9 69 79.7
vmacro01197 Vaccinium macrocarpon HOM05D001690 ORTHO05D009096 6.0e-25 117.9 73 75.3
Dinv30998 Davidia involucrata HOM05D001690 ORTHO05D009096 1.3e-24 116.7 73 71.2
Dinv31105 Davidia involucrata HOM05D001690 ORTHO05D009096 1.3e-24 116.7 73 71.2
Rhsim12G0050200 Rhododendron simsii HOM05D001690 ORTHO05D009096 1.3e-24 116.7 73 74.0
Cfa009103 Carpinus fangiana HOM05D001690 ORTHO05D009096 1.8e-24 116.3 73 72.6
Hma1.2p1_0160F.1_g070590 Hydrangea macrophylla HOM05D001690 ORTHO05D009096 3.0e-24 115.5 73 71.2
CiPaw.06G074800 Carya illinoinensis HOM05D001690 ORTHO05D009096 3.9e-24 115.2 73 68.5
Migut.L01445 Erythranthe guttata HOM05D001690 ORTHO05D009096 3.9e-24 115.2 73 74.0
SalBow2G0686 Salvia bowleyana HOM05D001690 ORTHO05D009096 6.7e-24 114.4 73 72.6
SalBow2G2592 Salvia bowleyana HOM05D001690 ORTHO05D009096 6.7e-24 114.4 73 72.6
CSS0041586 Camellia sinensis var. sinensis HOM05D001690 ORTHO05D009096 8.7e-24 114.0 70 75.7
Haze_12139 Corylus avellana HOM05D001690 ORTHO05D009096 8.7e-24 114.0 73 71.2
FAN22G0616 Fragaria x ananassa HOM05D001690 ORTHO05D009096 8.7e-24 114.0 73 74.0
unitig_699.g19928 Utricularia gibba HOM05D001690 ORTHO05D009096 1.5e-23 113.2 73 71.2
DCAR_026553 Daucus carota HOM05D001690 ORTHO05D009096 1.9e-23 112.8 74 68.9
RcHm_v2.0_Chr4g0444521 Rosa chinensis HOM05D001690 ORTHO05D009096 1.9e-23 112.8 73 69.9
Sabra08G0111900 Salix brachista HOM05D001690 ORTHO05D009096 1.9e-23 112.8 73 71.2
Sc14g0008550 Simmondsia chinensis HOM05D001690 ORTHO05D009096 1.9e-23 112.8 72 73.6
COL.COLO4_37898 Corchorus olitorius HOM05D001690 ORTHO05D002627 2.5e-23 112.5 105 55.2
ECA234G3380 Erigeron canadensis HOM05D006031 ORTHO05D007417 2.5e-23 112.5 73 67.1
Gohir.D02G165700 Gossypium hirsutum HOM05D001690 ORTHO05D009096 2.5e-23 112.5 90 62.2
Gorai.005G185800 Gossypium raimondii HOM05D001690 ORTHO05D009096 2.5e-23 112.5 90 62.2
QL03p062480 Quercus lobata HOM05D001690 ORTHO05D009096 2.5e-23 112.5 70 70.0
TWI18G1158 Tripterygium wilfordii HOM05D001690 ORTHO05D002627 2.5e-23 112.5 73 68.5
vmacro12906 Vaccinium macrocarpon HOM05D001690 ORTHO05D009096 2.5e-23 112.5 73 71.2
Manes.01G196800 Manihot esculenta HOM05D001690 ORTHO05D009096 4.3e-23 111.7 70 72.9
FvH4_4g35000 Fragaria vesca HOM05D001690 ORTHO05D009096 5.6e-23 111.3 73 72.6
FAN07G2318 Fragaria x ananassa HOM05D001690 ORTHO05D009096 5.6e-23 111.3 73 72.6
FAN12G1851 Fragaria x ananassa HOM05D001690 ORTHO05D009096 5.6e-23 111.3 73 72.6
Gohir.A03G142400 Gossypium hirsutum HOM05D001690 ORTHO05D009096 5.6e-23 111.3 89 61.8
Thecc.02G242600 Theobroma cacao HOM05D001690 ORTHO05D009096 5.6e-23 111.3 90 63.3
CAN.G1160.1 Capsicum annuum HOM05D001690 ORTHO05D009096 7.4e-23 110.9 72 72.2
Lj3C1049G3 Lonicera japonica HOM05D001690 ORTHO05D009096 9.6e-23 110.5 105 55.2
PGSC0003DMG400015577 Solanum tuberosum HOM05D001690 ORTHO05D009096 9.6e-23 110.5 72 70.8
Cc11_g14250 Coffea canephora HOM05D001690 ORTHO05D009096 1.3e-22 110.2 73 69.9
Potri.008G147000 Populus trichocarpa HOM05D001690 ORTHO05D009096 1.3e-22 110.2 73 71.2
PGR119G1314 Punica granatum HOM05D001690 ORTHO05D009096 1.3e-22 110.2 104 53.8
Solyc05g006100.4 Solanum lycopersicum HOM05D001690 ORTHO05D009096 1.6e-22 109.8 72 70.8
Sopen05g002120 Solanum pennellii HOM05D001690 ORTHO05D009096 1.6e-22 109.8 72 70.8
Aqoxy3G03080 Aquilegia oxysepala HOM05D001690 ORTHO05D009096 2.1e-22 109.4 76 63.2
MSTRG.621 Avicennia marina HOM05D001690 ORTHO05D009096 2.1e-22 109.4 73 68.5
Aa31LG7G7870 Aethionema arabicum HOM05D001690 ORTHO05D009096 2.8e-22 109.0 99 56.6
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 2.8e-22 109.0 71 69.0
Ciclev10033984m.g Citrus clementina HOM05D001690 ORTHO05D009096 2.8e-22 109.0 70 72.9
HanXRQChr04g0103621 Helianthus annuus HOM05D001690 ORTHO05D009096 2.8e-22 109.0 73 67.1
Lsat_1_v5_gn_4_6521 Lactuca sativa HOM05D001690 ORTHO05D009096 2.8e-22 109.0 73 65.8
Nitab4.5_0000257g0260 Nicotiana tabacum HOM05D001690 ORTHO05D009096 2.8e-22 109.0 75 69.3
SGA_v2.0_scaffold8G04246 Striga asiatica HOM05D001690 ORTHO05D009096 2.8e-22 109.0 111 55.9
Atru.chr11.1963 Acer truncatum HOM05D001690 ORTHO05D009096 3.7e-22 108.6 67 74.6
TWI36G1443 Tripterygium wilfordii HOM05D001690 ORTHO05D002627 4.8e-22 108.2 73 64.4
TAR629G0556 Trochodendron aralioides HOM05D001690 ORTHO05D009096 4.8e-22 108.2 80 60.0
MBI14_g12607_MAGBIO Magnolia biondii HOM05D001690 ORTHO05D009096 6.2e-22 107.8 72 65.3
Peaxi162Scf00421g00710 Petunia axillaris HOM05D001690 ORTHO05D009096 8.1e-22 107.5 72 68.1
arahy.Tifrunner.gnm1.ann1.00SZA6 Arachis hypogaea HOM05D001690 ORTHO05D009096 1.1e-21 107.1 71 67.6
Lalb_Chr09g0326501 Lupinus albus HOM05D001690 ORTHO05D009096 1.1e-21 107.1 88 58.0
Nitab4.5_0005722g0030 Nicotiana tabacum HOM05D001690 ORTHO05D009096 1.1e-21 107.1 75 69.3
Duzib248G1036 Durio zibethinus HOM05D001690 ORTHO05D009096 1.4e-21 106.7 103 54.4
Zm00001eb371950 Zea mays HOM05D001690 ORTHO05D009096 1.4e-21 106.7 72 68.1
Cpa.g.sc5.350 Carica papaya HOM05D001690 ORTHO05D009096 3.1e-21 105.5 70 68.6
Lj2g0027896 Lotus japonicus HOM05D001690 ORTHO05D009096 3.1e-21 105.5 114 51.8
TPR.G13490 Trifolium pratense HOM05D001690 ORTHO05D009096 5.3e-21 104.8 69 66.7
MD13G1087000 Malus domestica HOM05D001690 ORTHO05D009096 6.9e-21 104.4 73 65.8
Psat2g111480 Pisum sativum HOM05D001690 ORTHO05D009096 6.9e-21 104.4 86 58.1
Medtr5g035310 Medicago truncatula HOM05D001690 ORTHO05D009096 9.0e-21 104.0 69 65.2
HPP92_017336 Vanilla planifolia HOM05D001690 ORTHO05D009096 9.0e-21 104.0 78 59.0
THA.LOC109116916 Tarenaya hassleriana HOM05D001690 ORTHO05D009096 1.5e-20 103.2 98 54.1
CANSAT35G0663 Cannabis sativa HOM05D001690 ORTHO05D009096 3.4e-20 102.1 67 67.2
Actinidia08182 Actinidia chinensis HOM05D001690 ORTHO05D009096 4.5e-20 101.7 67 68.7
Carub.0001s2353 Capsella rubella HOM05D001690 ORTHO05D009096 4.5e-20 101.7 102 52.9
CDE04G3384 Ceratophyllum demersum HOM05D001690 ORTHO05D009096 4.5e-20 101.7 67 70.1
BcaB07g32380 Brassica carinata HOM05D001690 ORTHO05D009096 5.8e-20 101.3 101 51.5
PSO063G0131 Papaver somniferum HOM05D001690 ORTHO05D009096 7.6e-20 100.9 69 65.2
PSO832G0212 Papaver somniferum HOM05D001690 ORTHO05D009096 7.6e-20 100.9 69 65.2
CANSAT25G2126 Cannabis sativa HOM05D001690 ORTHO05D009096 1.0e-19 100.5 67 65.7
CARHR024380 Cardamine hirsuta HOM05D001690 ORTHO05D009096 1.0e-19 100.5 102 52.0
Prupe.1G259700 Prunus persica HOM05D001690 ORTHO05D009096 1.0e-19 100.5 73 64.4
EL10Ac6g13729 Beta vulgaris HOM05D001690 ORTHO05D009096 1.3e-19 100.1 105 53.3
MD16G1087300 Malus domestica HOM05D001690 ORTHO05D009096 1.7e-19 99.8 73 61.6
ClCG05G025030 Citrullus lanatus HOM05D001690 ORTHO05D009096 2.2e-19 99.4 69 69.6
VMungo1215G1997 Vigna mungo HOM05D001690 ORTHO05D009096 2.2e-19 99.4 71 64.8
AT1G24095 Arabidopsis thaliana HOM05D001690 ORTHO05D009096 2.9e-19 99.0 102 50.0
A09p40800 Brassica napus HOM05D001690 ORTHO05D009096 2.9e-19 99.0 101 50.5
C05p23190 Brassica napus HOM05D001690 ORTHO05D009096 2.9e-19 99.0 101 50.5
BraA09t39574Z Brassica rapa HOM05D001690 ORTHO05D009096 2.9e-19 99.0 101 50.5
AL1G37900 Arabidopsis lyrata HOM05D001690 ORTHO05D009096 3.8e-19 98.6 102 50.0
SEGI_04544 Sequoiadendron giganteum HOM05D001690 ORTHO05D009096 3.8e-19 98.6 72 65.3
Glyma.02G037900 Glycine max HOM05D001690 ORTHO05D009096 6.5e-19 97.8 86 54.7
BcaC05g26303 Brassica carinata HOM05D001690 ORTHO05D009096 8.4e-19 97.4 101 49.5
BolC5t31021H Brassica oleracea HOM05D001690 ORTHO05D009096 8.4e-19 97.4 101 49.5
Phvul.002G059700 Phaseolus vulgaris HOM05D001690 ORTHO05D009096 8.4e-19 97.4 71 66.2
Sp1g21410 Schrenkiella parvula HOM05D001690 ORTHO05D009096 1.1e-18 97.1 101 48.5
Thhalv10008745m.g Eutrema salsugineum HOM05D001690 ORTHO05D009096 1.4e-18 96.7 101 48.5
SMO147G0177 Selaginella moellendorffii HOM05D001690 ORTHO05D009096 1.4e-18 96.7 78 59.0
Sed0019838 Sechium edule HOM05D001690 ORTHO05D009096 3.2e-18 95.5 87 59.8
CsaV3_5G031860 Cucumis sativus L. HOM05D001690 ORTHO05D009096 5.5e-18 94.7 73 63.0
CSS0030261 Camellia sinensis var. sinensis HOM05D001690 ORTHO05D009096 8.7e-16 87.4 60 66.7
Pp3c10_1390 Physcomitrium patens HOM05D001690 ORTHO05D009096 3.3e-15 85.5 73 57.5
CBR_g38731 Chara braunii HOM05D001690 ORTHO05D009096 1.6e-14 83.2 100 46.0
EL10Ac9g21122 Beta vulgaris HOM05D001690 ORTHO05D009096 4.5e-12 75.1 39 97.4
BcaC05g26305 Brassica carinata HOM05D001690 ORTHO05D009096 5.0e-11 71.6 45 64.4
FAN22G1692 Fragaria x ananassa HOM05D003615 ORTHO05D004858 7.9e-09 64.3 38 81.6


User provided reference genes

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