Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10959 Beta vulgaris HOM05D000730 ORTHO05D000578 4.6e-32 140.6 69 100.0
AUR62031742 Chenopodium quinoa HOM05D000730 ORTHO05D000578 4.0e-20 100.9 60 80.0
Ah.10g030070 Amaranthus hybridus HOM05D000730 ORTHO05D000578 3.4e-19 97.8 58 77.6
Hund15746 Selenicereus undatus HOM05D000730 ORTHO05D000578 1.3e-18 95.9 57 80.7
AUR62032627 Chenopodium quinoa HOM05D000730 ORTHO05D000578 4.9e-18 94.0 58 79.3
Sc10g0004540 Simmondsia chinensis HOM05D000730 ORTHO05D000578 1.4e-17 92.4 60 73.3
EL10Ac2g02767 Beta vulgaris HOM05D000730 ORTHO05D000578 1.2e-16 89.4 55 76.4
Lsat_1_v5_gn_7_31081 Lactuca sativa HOM05D000730 ORTHO05D000578 8.7e-15 83.2 64 57.8
Dinv44710 Davidia involucrata HOM05D000730 ORTHO05D000578 1.5e-14 82.4 58 67.2
ECA236G3986 Erigeron canadensis HOM05D000730 ORTHO05D000578 3.3e-14 81.3 58 62.1
Rhsim07G0068600 Rhododendron simsii HOM05D000730 ORTHO05D000578 3.3e-14 81.3 58 63.8
vmacro07437 Vaccinium macrocarpon HOM05D000730 ORTHO05D000578 3.3e-14 81.3 58 63.8
HanXRQChr04g0119551 Helianthus annuus HOM05D000730 ORTHO05D000578 9.6e-14 79.7 58 62.1
Aqoxy2G00416 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 1.1e-12 76.3 56 58.9
Lj9A659T52 Lonicera japonica HOM05D000730 ORTHO05D000578 4.0e-12 74.3 58 63.8
Actinidia06224 Actinidia chinensis HOM05D000730 ORTHO05D000578 5.3e-12 73.9 57 57.9
MD02G1278500 Malus domestica HOM05D000730 ORTHO05D000578 5.3e-12 73.9 58 62.1
CSS0025631 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D000578 9.0e-12 73.2 58 58.6
FvH4_7g03630 Fragaria vesca HOM05D000730 ORTHO05D000578 9.0e-12 73.2 52 67.3
FAN03G3014 Fragaria x ananassa HOM05D000730 ORTHO05D000578 9.0e-12 73.2 52 67.3
FAN10G2667 Fragaria x ananassa HOM05D000730 ORTHO05D000578 9.0e-12 73.2 52 67.3
CANSAT56G2780 Cannabis sativa HOM05D000730 ORTHO05D000578 1.5e-11 72.4 50 66.0
Prupe.2G042100 Prunus persica HOM05D000730 ORTHO05D000578 1.5e-11 72.4 51 66.7
SEGI_22094 Sequoiadendron giganteum HOM05D000730 ORTHO05D000578 1.5e-11 72.4 60 51.7
HPP92_021195 Vanilla planifolia HOM05D000730 ORTHO05D000578 1.5e-11 72.4 57 56.1
Zm00001eb285140 Zea mays HOM05D000730 ORTHO05D000578 1.5e-11 72.4 57 54.4
CDE09G0864 Ceratophyllum demersum HOM05D000730 ORTHO05D000578 2.0e-11 72.0 58 50.0
MD07G1046600 Malus domestica HOM05D000730 ORTHO05D000578 3.4e-11 71.2 58 58.6
Manes.04G156900 Manihot esculenta HOM05D000730 ORTHO05D000578 4.5e-11 70.9 51 62.7
FAN06G3967 Fragaria x ananassa HOM05D000730 ORTHO05D000578 5.8e-11 70.5 51 66.7
Potri.001G030100 Populus trichocarpa HOM05D000730 ORTHO05D000578 5.8e-11 70.5 50 66.0
Atru.chr12.1287 Acer truncatum HOM05D000730 ORTHO05D000578 7.6e-11 70.1 51 60.8
Eucgr.J00067 Eucalyptus grandis HOM05D000730 ORTHO05D000578 7.6e-11 70.1 50 62.0
Ca_23976_v3 Cicer arietinum L. HOM05D000730 ORTHO05D000578 9.9e-11 69.7 62 53.2
Peaxi162Scf00082g00018 Petunia axillaris HOM05D000730 ORTHO05D000578 9.9e-11 69.7 58 56.9
MBI19_g36134_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 1.3e-10 69.3 58 55.2
Cc00_g07550 Coffea canephora HOM05D000730 ORTHO05D000578 1.7e-10 68.9 58 53.4
Lj3g0012169 Lotus japonicus HOM05D000730 ORTHO05D000578 1.7e-10 68.9 66 51.5
Nitab4.5_0002838g0080 Nicotiana tabacum HOM05D000730 ORTHO05D000578 1.7e-10 68.9 58 55.2
Psat4g145160 Pisum sativum HOM05D000730 ORTHO05D000578 1.7e-10 68.9 47 63.8
BcaB05g25310 Brassica carinata HOM05D000730 ORTHO05D000578 2.2e-10 68.6 51 58.8
BcaB05g25314 Brassica carinata HOM05D000730 ORTHO05D000578 2.2e-10 68.6 51 58.8
Glyma.13G192900 Glycine max HOM05D000730 ORTHO05D000578 2.2e-10 68.6 47 68.1
RcHm_v2.0_Chr1g0326411 Rosa chinensis HOM05D000730 ORTHO05D000578 2.2e-10 68.6 51 64.7
TWI60G0879 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 2.2e-10 68.6 51 62.7
COL.COLO4_20721 Corchorus olitorius HOM05D000730 ORTHO05D000578 2.9e-10 68.2 51 62.7
Gohir.A05G283200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 2.9e-10 68.2 51 60.8
PSO339G1614 Papaver somniferum HOM05D000730 ORTHO05D000578 2.9e-10 68.2 58 53.4
Duzib114G0880 Durio zibethinus HOM05D000730 ORTHO05D000578 3.8e-10 67.8 51 60.8
Duzib128G1742 Durio zibethinus HOM05D000730 ORTHO05D000578 3.8e-10 67.8 51 60.8
Gohir.D05G284200 Gossypium hirsutum HOM05D000730 ORTHO05D000578 3.8e-10 67.8 51 60.8
Gorai.009G298800 Gossypium raimondii HOM05D000730 ORTHO05D000578 3.8e-10 67.8 51 60.8
arahy.Tifrunner.gnm1.ann1.8I68MQ Arachis hypogaea HOM05D000730 ORTHO05D000578 4.9e-10 67.4 51 62.7
arahy.Tifrunner.gnm1.ann1.H567TY Arachis hypogaea HOM05D000730 ORTHO05D000578 4.9e-10 67.4 51 62.7
BcaC06g32528 Brassica carinata HOM05D000730 ORTHO05D000578 4.9e-10 67.4 51 56.9
BcaNung04208 Brassica carinata HOM05D000730 ORTHO05D000578 4.9e-10 67.4 51 56.9
C09p69110 Brassica napus HOM05D000730 ORTHO05D000578 4.9e-10 67.4 51 56.9
BolC9t59655H Brassica oleracea HOM05D000730 ORTHO05D000578 4.9e-10 67.4 51 56.9
Haze_03002 Corylus avellana HOM05D000730 ORTHO05D000578 4.9e-10 67.4 60 51.7
Nn7g36786 Nelumbo nucifera HOM05D000730 ORTHO05D000578 4.9e-10 67.4 58 51.7
A10p28770 Brassica napus HOM05D000730 ORTHO05D000578 6.4e-10 67.0 51 56.9
BraA10t44924Z Brassica rapa HOM05D000730 ORTHO05D000578 6.4e-10 67.0 51 56.9
PSO384G0089 Papaver somniferum HOM05D000730 ORTHO05D000578 6.4e-10 67.0 58 51.7
Sp6g35900 Schrenkiella parvula HOM05D000730 ORTHO05D000578 6.4e-10 67.0 51 56.9
Solyc01g096540.4 Solanum lycopersicum HOM05D000730 ORTHO05D000578 6.4e-10 67.0 58 55.2
Sopen01g040270 Solanum pennellii HOM05D000730 ORTHO05D000578 6.4e-10 67.0 58 55.2
CAN.G134.13 Capsicum annuum HOM05D000730 ORTHO05D000578 8.4e-10 66.6 58 53.4
DCAR_006604 Daucus carota HOM05D000730 ORTHO05D000578 1.1e-09 66.2 58 56.9
Lalb_Chr19g0132961 Lupinus albus HOM05D000730 ORTHO05D000578 1.1e-09 66.2 50 58.0
CiPaw.13G015400 Carya illinoinensis HOM05D000730 ORTHO05D000578 1.4e-09 65.9 50 58.0
Medtr8g040190 Medicago truncatula HOM05D000730 ORTHO05D000578 1.4e-09 65.9 47 63.8
AL6G17130 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 1.9e-09 65.5 51 58.8
Phvul.011G201400 Phaseolus vulgaris HOM05D000730 ORTHO05D000578 1.9e-09 65.5 47 63.8
PGR044G0565 Punica granatum HOM05D000730 ORTHO05D000578 1.9e-09 65.5 50 56.0
VMungo1127G0979 Vigna mungo HOM05D000730 ORTHO05D000578 1.9e-09 65.5 47 63.8
ATR1096G139 Amborella trichopoda HOM05D000730 ORTHO05D000578 2.4e-09 65.1 58 46.6
CARHR206170 Cardamine hirsuta HOM05D000730 ORTHO05D000578 2.4e-09 65.1 51 56.9
ClCG05G026970 Citrullus lanatus HOM05D000730 ORTHO05D000578 2.4e-09 65.1 58 56.9
MELO3C012490.2 Cucumis melo HOM05D000730 ORTHO05D000578 2.4e-09 65.1 58 56.9
CsaV3_5G036910 Cucumis sativus L. HOM05D000730 ORTHO05D000578 2.4e-09 65.1 58 56.9
Thhalv10012512m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 2.4e-09 65.1 51 56.9
GSVIVG01036645001 Vitis vinifera HOM05D000730 ORTHO05D000578 2.4e-09 65.1 60 55.0
Glyma.15G230600 Glycine max HOM05D000730 ORTHO05D000578 3.2e-09 64.7 47 61.7
Sed0013589 Sechium edule HOM05D000730 ORTHO05D000578 3.2e-09 64.7 58 56.9
SMO116G0331 Selaginella moellendorffii HOM05D000730 ORTHO05D000578 3.2e-09 64.7 57 50.9
Nitab4.5_0005420g0020 Nicotiana tabacum HOM05D000730 ORTHO05D000578 4.2e-09 64.3 58 51.7
Oeu064135.2 Olea europaea HOM05D000730 ORTHO05D000578 4.2e-09 64.3 56 51.8
Migut.B01242 Erythranthe guttata HOM05D000730 ORTHO05D000578 5.4e-09 63.9 58 51.7
THA.LOC104799323 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 5.4e-09 63.9 51 56.9
Thecc.10G145500 Theobroma cacao HOM05D000730 ORTHO05D000578 5.4e-09 63.9 51 60.8
AT5G06970 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 9.3e-09 63.2 51 56.9
Carub.0006s0590 Capsella rubella HOM05D000730 ORTHO05D000578 9.3e-09 63.2 51 54.9
Sabra01G0021600 Salix brachista HOM05D000730 ORTHO05D000578 9.3e-09 63.2 45 66.7
Lalb_Chr03g0032161 Lupinus albus HOM05D000730 ORTHO05D000578 1.2e-08 62.8 46 63.0
Aa31sc24G200 Aethionema arabicum HOM05D000730 ORTHO05D000578 1.6e-08 62.4 51 54.9
Lalb_Chr01g0007381 Lupinus albus HOM05D000730 ORTHO05D000578 1.6e-08 62.4 50 58.0
TPR.G8523 Trifolium pratense HOM05D000730 ORTHO05D000578 3.5e-08 61.2 58 50.0
Cpa.g.sc169.47 Carica papaya HOM05D000730 ORTHO05D000578 7.9e-08 60.1 60 51.7
SalBow5G1057 Salvia bowleyana HOM05D000730 ORTHO05D000578 7.9e-08 60.1 58 48.3
AagrBONN_evm.TU.Sc2ySwM_344.4217 Anthoceros agrestis HOM05D000730 ORTHO05D000578 1.3e-07 59.3 54 50.0
Pp3c7_24310 Physcomitrium patens HOM05D000730 ORTHO05D000578 1.8e-07 58.9 57 43.9
TAR375G0386 Trochodendron aralioides HOM05D000730 ORTHO05D000578 1.8e-07 58.9 55 45.5
Nn6g34206 Nelumbo nucifera HOM05D000730 ORTHO05D000578 2.3e-07 58.5 66 34.8
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 3.0e-07 58.2 56 50.0
Actinidia02031 Actinidia chinensis HOM05D000730 ORTHO05D000578 5.1e-07 57.4 64 35.9
Mapoly0125s0045 Marchantia polymorpha HOM05D000730 ORTHO05D000578 6.7e-07 57.0 55 45.5
SGA_v2.0_scaffold124G33604 Striga asiatica HOM05D000730 ORTHO05D000578 8.7e-07 56.6 56 48.2
ATR0757G158 Amborella trichopoda HOM05D000730 ORTHO05D000578 1.9e-06 55.5 66 40.9
Solyc08g080520.4 Solanum lycopersicum HOM05D000730 ORTHO05D000578 5.6e-06 53.9 55 40.0
Sopen08g028840 Solanum pennellii HOM05D000730 ORTHO05D000578 5.6e-06 53.9 55 40.0
GSVIVG01019827001 Vitis vinifera HOM05D000730 ORTHO05D000578 5.6e-06 53.9 55 43.6


User provided reference genes

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