Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 0.0e+00 1812.7 895 100.0
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 0.0e+00 1170.6 953 65.8
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 0.0e+00 1127.5 953 64.1
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 1.4e-306 1056.2 937 62.2
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 6.1e-270 934.5 963 54.9
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 1.3e-198 697.6 945 48.6
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 1.5e-180 637.5 951 44.6
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 4.8e-174 615.9 960 44.0
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.2e-169 601.3 983 42.9
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 2.4e-165 587.0 971 43.2
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 6.1e-161 572.4 1012 40.8
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 1.5e-159 567.8 1010 41.2
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 1.9e-154 550.8 945 39.5
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 1.2e-153 548.1 965 41.6
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 6.1e-153 545.8 1076 39.4
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 1.4e-152 544.7 957 40.5
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 1.8e-152 544.3 837 44.4
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 5.7e-151 539.3 944 41.3
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 1.2e-148 531.6 951 40.4
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 4.5e-148 529.6 1093 38.1
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 7.7e-148 528.9 942 40.0
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.3e-147 527.3 987 40.9
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 1.5e-146 524.6 706 47.3
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 1.8e-144 517.7 550 54.5
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 4.0e-144 516.5 946 40.1
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 3.4e-143 513.5 962 39.5
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 2.2e-142 510.8 1030 38.6
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 8.3e-142 508.8 659 48.6
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 3.2e-141 506.9 616 50.8
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 1.2e-140 505.0 951 38.1
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 2.3e-139 500.7 938 39.6
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 2.5e-138 497.3 542 53.7
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 5.6e-138 496.1 522 54.6
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 1.6e-137 494.6 948 39.3
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 3.6e-137 493.4 542 54.8
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 8.0e-137 492.3 548 53.5
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 8.0e-137 492.3 962 40.7
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 1.0e-136 491.9 417 62.1
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 1.8e-136 491.1 522 55.0
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 6.8e-136 489.2 597 51.6
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 1.7e-134 484.6 940 39.8
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 8.3e-134 482.3 494 56.7
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 8.3e-134 482.3 656 48.2
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 7.0e-133 479.2 504 55.0
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 2.0e-132 477.6 544 54.4
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 4.6e-132 476.5 648 47.4
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 3.0e-131 473.8 935 39.4
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 8.6e-131 472.2 487 56.3
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 1.5e-130 471.5 948 39.5
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 1.5e-130 471.5 489 56.4
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 1.5e-130 471.5 1104 36.1
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 1.9e-130 471.1 967 39.8
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 8.1e-129 465.7 737 42.9
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 2.3e-128 464.2 1069 35.3
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 8.9e-128 462.2 986 36.8
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 1.5e-127 461.5 679 43.4
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 4.4e-127 459.9 969 38.9
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 2.4e-125 454.1 949 36.5
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.2e-124 451.8 933 37.6
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 5.6e-122 443.0 577 48.4
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 9.5e-122 442.2 940 37.4
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.2e-121 441.8 499 51.3
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 1.2e-121 441.8 972 38.6
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 2.1e-121 441.0 449 57.9
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 4.0e-120 436.8 934 36.5
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.6e-119 434.1 972 37.1
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 4.4e-119 433.3 705 43.4
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 9.9e-119 432.2 500 50.8
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 3.7e-118 430.3 460 54.8
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 3.2e-117 427.2 936 36.6
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 4.6e-116 423.3 393 58.8
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 5.1e-115 419.9 420 54.3
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 1.9e-114 417.9 950 35.7
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 6.8e-112 409.5 399 56.6
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 1.5e-111 408.3 398 56.0
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 2.0e-111 407.9 419 54.7
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 7.6e-111 406.0 398 56.3
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 1.7e-110 404.8 551 47.4
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 8.4e-110 402.5 395 56.2
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 8.4e-110 402.5 763 40.6
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 7.1e-109 399.4 978 35.2
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 1.2e-108 398.7 973 36.2
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 2.1e-108 397.9 514 47.7
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 4.6e-108 396.7 391 56.8
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 4.6e-108 396.7 389 56.3
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 3.9e-107 393.7 531 48.2
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 8.7e-107 392.5 389 55.8
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 9.6e-106 389.0 390 55.6
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 2.1e-105 387.9 472 48.5
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 1.1e-104 385.6 986 33.8
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 1.8e-104 384.8 736 40.1
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 2.4e-104 384.4 541 46.0
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 4.0e-104 383.6 937 36.0
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 5.3e-104 383.3 413 53.0
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 1.5e-103 381.7 857 37.6
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 1.5e-103 381.7 491 48.3
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 3.8e-102 377.1 596 44.3
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 5.4e-101 373.2 417 52.0
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 9.3e-101 372.5 241 76.8
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 5.1e-99 366.7 687 40.5
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 3.3e-98 364.0 499 45.9
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 2.4e-93 347.8 424 49.1
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 1.9e-77 295.0 955 29.7
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 4.1e-72 277.3 593 36.9
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 8.8e-67 259.6 346 45.7
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 6.5e-54 216.9 663 34.8
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 1.5e-37 162.5 169 52.1
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 2.7e-36 158.3 201 42.3
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 1.8e-32 145.6 94 74.5
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 4.1e-16 91.3 111 44.1
Duzib084G1176 Durio zibethinus HOM05D006304 ORTHO05D008584 9.8e-10 70.1 66 50.0
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 2.7e-07 62.0 52 55.8
CSS0027880 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 3.0e-06 58.5 56 53.6


User provided reference genes

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