Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 3.2e-138 495.7 391 100.0
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 5.5e-90 335.5 399 71.7
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 4.8e-78 295.8 396 71.5
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.6e-73 280.8 337 63.8
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 2.0e-63 247.3 391 50.4
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 1.3e-62 244.6 388 53.6
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 1.4e-61 241.1 388 50.0
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 7.0e-61 238.8 394 52.5
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 3.5e-60 236.5 389 50.1
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 4.5e-60 236.1 390 51.3
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 1.7e-59 234.2 409 50.9
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 2.2e-59 233.8 387 61.8
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 2.2e-59 233.8 392 41.1
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 5.0e-59 232.6 389 52.7
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 1.1e-58 231.5 409 49.1
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 7.2e-58 228.8 388 51.8
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 7.2e-58 228.8 388 51.8
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 7.2e-58 228.8 393 58.0
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 1.6e-57 227.6 389 50.6
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 2.7e-57 226.9 393 53.7
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 8.0e-57 225.3 392 46.2
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 2.3e-56 223.8 390 51.5
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 2.3e-56 223.8 393 55.0
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 4.0e-56 223.0 399 59.1
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 5.2e-56 222.6 394 49.0
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 5.2e-56 222.6 388 51.5
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 6.8e-56 222.2 389 51.2
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 8.8e-56 221.9 392 50.5
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 1.2e-55 221.5 390 56.4
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 2.6e-55 220.3 388 47.4
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 3.4e-55 219.9 391 48.1
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 7.5e-55 218.8 391 52.2
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 2.2e-54 217.2 389 39.3
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 2.8e-54 216.9 393 48.1
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 3.7e-54 216.5 389 49.9
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 3.7e-54 216.5 393 42.7
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 8.3e-54 215.3 389 55.0
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.4e-53 214.5 392 53.3
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 1.8e-53 214.2 404 49.5
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 1.8e-53 214.2 400 54.5
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.8e-53 214.2 401 48.9
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 3.1e-53 213.4 396 49.5
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 5.4e-53 212.6 390 45.9
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 9.2e-53 211.8 390 51.8
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 9.2e-53 211.8 388 49.0
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.2e-52 211.5 400 47.2
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 2.0e-52 210.7 395 47.8
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 2.0e-52 210.7 403 48.4
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 2.7e-52 210.3 406 60.3
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 3.5e-52 209.9 395 46.1
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 3.5e-52 209.9 404 50.0
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 7.7e-52 208.8 390 44.1
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 1.0e-51 208.4 394 48.2
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 1.0e-51 208.4 389 44.0
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 1.0e-51 208.4 389 50.9
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 1.3e-51 208.0 391 52.7
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 2.3e-51 207.2 389 47.6
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 2.3e-51 207.2 394 48.7
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 2.3e-51 207.2 391 53.5
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 6.6e-51 205.7 391 52.9
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.1e-50 204.9 394 53.3
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 1.2e-49 201.4 398 54.5
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.2e-49 201.4 389 47.8
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 1.6e-49 201.1 397 46.9
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 2.1e-49 200.7 396 53.8
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 3.6e-49 199.9 390 52.8
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 3.6e-49 199.9 387 47.0
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 6.1e-49 199.1 387 47.8
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 8.0e-49 198.7 388 44.1
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 8.0e-49 198.7 388 44.1
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 1.0e-48 198.4 390 52.3
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 2.3e-48 197.2 402 49.0
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 1.2e-47 194.9 389 46.0
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 1.2e-47 194.9 390 39.5
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 4.4e-47 193.0 389 49.9
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 4.4e-47 193.0 386 48.7
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 5.7e-47 192.6 389 47.3
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 4.9e-46 189.5 391 46.3
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 2.4e-45 187.2 387 34.6
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 3.2e-45 186.8 387 34.4
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 4.1e-45 186.4 388 42.8
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 9.2e-45 185.3 403 44.9
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 3.5e-44 183.3 389 46.8
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 3.5e-44 183.3 299 68.9
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 3.0e-43 180.3 185 51.4
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 1.6e-41 174.5 394 45.4
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 2.8e-41 173.7 388 41.8
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 8.0e-41 172.2 296 59.5
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 5.2e-40 169.5 391 46.8
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 5.8e-39 166.0 394 48.7
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 1.1e-37 161.8 335 49.3
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 2.7e-36 157.1 150 54.7
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 1.3e-35 154.8 160 51.2
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 3.9e-35 153.3 388 37.9
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 8.9e-32 142.1 106 63.2
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 3.4e-31 140.2 143 50.3
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 2.2e-30 137.5 167 46.7
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 4.1e-29 133.3 495 30.5
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 7.1e-29 132.5 362 37.8
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 2.5e-26 124.0 305 49.8
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 1.6e-25 121.3 128 48.4
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 8.9e-24 115.5 293 44.7
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 5.8e-23 112.8 134 48.5
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 3.5e-20 103.6 122 43.4
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 1.7e-19 101.3 140 44.3
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 5.1e-19 99.8 84 65.5
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 4.3e-18 96.7 125 37.6
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 2.8e-17 94.0 158 36.7
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.1e-16 92.0 77 66.2
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 1.1e-16 92.0 190 34.7
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.2e-15 88.6 98 56.1
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.5e-15 88.2 75 62.7
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 1.9e-13 81.3 94 43.6
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 3.2e-13 80.5 63 50.8
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 7.8e-12 75.9 72 47.2
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 1.1e-10 72.0 90 40.0
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.8e-06 57.0 81 34.6
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 6.4e-06 56.2 52 50.0


User provided reference genes

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