Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10844 Beta vulgaris HOM05D007939 ORTHO05D010027 1.9e-72 275.8 141 100.0
EL10Ac5g11334 Beta vulgaris HOM05D007939 ORTHO05D010027 1.9e-16 89.7 45 97.8
EL10Ac5g10864 Beta vulgaris HOM05D007939 ORTHO05D010027 4.2e-16 88.6 45 95.6
Atru.chr9.2381 Acer truncatum HOM05D007939 ORTHO05D010027 6.7e-14 81.3 46 82.6
Rhsim08G0164200 Rhododendron simsii HOM05D007939 ORTHO05D010027 1.1e-13 80.5 57 68.4
Manes.14G071800 Manihot esculenta HOM05D007939 ORTHO05D010027 1.5e-13 80.1 51 74.5
Lj9A455T57 Lonicera japonica HOM05D007939 ORTHO05D010027 2.0e-13 79.7 46 78.3
Hund02701 Selenicereus undatus HOM05D007939 ORTHO05D010027 3.3e-13 79.0 46 80.4
Thhalv10010893m.g Eutrema salsugineum HOM05D007939 ORTHO05D010027 5.7e-13 78.2 49 77.6
Glyma.05G032500 Glycine max HOM05D007939 ORTHO05D010027 7.4e-13 77.8 46 78.3
Carub.0005s1396 Capsella rubella HOM05D007939 ORTHO05D010027 9.7e-13 77.4 49 77.6
Nitab4.5_0002101g0080 Nicotiana tabacum HOM05D007939 ORTHO05D010027 9.7e-13 77.4 66 59.1
Sabra12G0052700 Salix brachista HOM05D007939 ORTHO05D010027 9.7e-13 77.4 45 82.2
Nn4g22962 Nelumbo nucifera HOM05D007939 ORTHO05D010027 1.3e-12 77.0 46 78.3
Gohir.A12G276700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 1.7e-12 76.6 46 78.3
Gohir.D12G277700 Gossypium hirsutum HOM05D007939 ORTHO05D010027 1.7e-12 76.6 46 78.3
Gorai.008G298400 Gossypium raimondii HOM05D007939 ORTHO05D010027 1.7e-12 76.6 46 78.3
Thecc.03G001700 Theobroma cacao HOM05D007939 ORTHO05D010027 1.7e-12 76.6 46 78.3
Haze_07419 Corylus avellana HOM05D007939 ORTHO05D010027 2.8e-12 75.9 53 69.8
Lalb_Chr13g0298021 Lupinus albus HOM05D007939 ORTHO05D010027 2.8e-12 75.9 46 76.1
Phvul.003G196000 Phaseolus vulgaris HOM05D007939 ORTHO05D010027 2.8e-12 75.9 46 76.1
CARHR156540 Cardamine hirsuta HOM05D007939 ORTHO05D010027 3.7e-12 75.5 49 75.5
Ciclev10023252m.g Citrus clementina HOM05D007939 ORTHO05D010027 3.7e-12 75.5 53 69.8
Sed0024093 Sechium edule HOM05D007939 ORTHO05D010027 3.7e-12 75.5 46 76.1
BcaB01g00871 Brassica carinata HOM05D007939 ORTHO05D010027 4.8e-12 75.1 49 73.5
C03p72070 Brassica napus HOM05D007939 ORTHO05D010027 4.8e-12 75.1 49 73.5
BolC3t19505H Brassica oleracea HOM05D007939 ORTHO05D010027 4.8e-12 75.1 49 73.5
BraA06t25058Z Brassica rapa HOM05D007939 ORTHO05D010027 4.8e-12 75.1 49 73.5
COL.COLO4_05795 Corchorus olitorius HOM05D007939 ORTHO05D010027 4.8e-12 75.1 45 77.8
Lj4g0008013 Lotus japonicus HOM05D007939 ORTHO05D010027 6.3e-12 74.7 46 73.9
Nn3g17057 Nelumbo nucifera HOM05D007939 ORTHO05D010027 6.3e-12 74.7 46 76.1
Potri.012G074300 Populus trichocarpa HOM05D007939 ORTHO05D010027 6.3e-12 74.7 46 76.1
Sp5g14120 Schrenkiella parvula HOM05D007939 ORTHO05D010027 8.2e-12 74.3 49 73.5
BcaC01g01771 Brassica carinata HOM05D007939 ORTHO05D010027 1.1e-11 73.9 45 80.0
CsaV3_1G008140 Cucumis sativus L. HOM05D007939 ORTHO05D010027 1.1e-11 73.9 46 76.1
Prupe.5G181400 Prunus persica HOM05D007939 ORTHO05D010027 1.1e-11 73.9 46 76.1
BcaB02g10687 Brassica carinata HOM05D007939 ORTHO05D010027 1.4e-11 73.6 45 80.0
CSS0005245 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 1.4e-11 73.6 45 75.6
Rhsim12G0160700 Rhododendron simsii HOM05D007939 ORTHO05D010027 1.4e-11 73.6 45 75.6
PGSC0003DMG400033058 Solanum tuberosum HOM05D007939 ORTHO05D010027 1.4e-11 73.6 48 68.8
AL5G27140 Arabidopsis lyrata HOM05D007939 ORTHO05D010027 1.8e-11 73.2 49 71.4
Cfa019042 Carpinus fangiana HOM05D007939 ORTHO05D010027 1.8e-11 73.2 46 73.9
ClCG01G014170 Citrullus lanatus HOM05D007939 ORTHO05D010027 1.8e-11 73.2 45 77.8
MELO3C002231.2 Cucumis melo HOM05D007939 ORTHO05D010027 1.8e-11 73.2 45 77.8
Aa31LG4G16500 Aethionema arabicum HOM05D007939 ORTHO05D010027 2.4e-11 72.8 45 77.8
CSS0025662 Camellia sinensis var. sinensis HOM05D007939 ORTHO05D010027 2.4e-11 72.8 45 77.8
Nitab4.5_0000003g0340 Nicotiana tabacum HOM05D007939 ORTHO05D010027 2.4e-11 72.8 44 77.3
Solyc06g071260.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 2.4e-11 72.8 48 68.8
CiPaw.11G033900 Carya illinoinensis HOM05D007939 ORTHO05D010027 3.1e-11 72.4 46 71.7
Sabra15G0093500 Salix brachista HOM05D007939 ORTHO05D010027 4.1e-11 72.0 60 60.0
HanXRQChr09g0271581 Helianthus annuus HOM05D007939 ORTHO05D010027 5.3e-11 71.6 48 68.8
MD14G1189000 Malus domestica HOM05D007939 ORTHO05D010027 5.3e-11 71.6 46 71.7
Oeu041591.1 Olea europaea HOM05D007939 ORTHO05D010027 5.3e-11 71.6 48 70.8
CAN.G628.63 Capsicum annuum HOM05D007939 ORTHO05D010027 9.1e-11 70.9 45 77.8
Medtr4g107140 Medicago truncatula HOM05D007939 ORTHO05D010027 1.2e-10 70.5 45 68.9
SalBow3G2524 Salvia bowleyana HOM05D007939 ORTHO05D010027 1.6e-10 70.1 46 67.4
Migut.D01894 Erythranthe guttata HOM05D007939 ORTHO05D010027 2.0e-10 69.7 46 69.6
PSO591G0029 Papaver somniferum HOM05D007939 ORTHO05D010027 2.0e-10 69.7 48 72.9
Cc04_g16150 Coffea canephora HOM05D007939 ORTHO05D010027 2.6e-10 69.3 45 73.3
DCAR_021553 Daucus carota HOM05D007939 ORTHO05D010027 2.6e-10 69.3 46 69.6
C03p66950 Brassica napus HOM05D007939 ORTHO05D010027 3.5e-10 68.9 49 69.4
Lsat_1_v5_gn_4_74421 Lactuca sativa HOM05D007939 ORTHO05D010027 3.5e-10 68.9 46 69.6
SGA_v2.0_scaffold7G04104 Striga asiatica HOM05D007939 ORTHO05D010027 3.5e-10 68.9 51 60.8
BolC3t18968H Brassica oleracea HOM05D007939 ORTHO05D010027 5.9e-10 68.2 52 69.2
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 7.7e-10 67.8 46 63.0
Solyc03g113670.4 Solanum lycopersicum HOM05D007939 ORTHO05D010027 1.3e-09 67.0 45 66.7
ATR0712G037 Amborella trichopoda HOM05D007939 ORTHO05D010027 2.2e-09 66.2 40 77.5
Oeu046758.2 Olea europaea HOM05D007939 ORTHO05D010027 2.2e-09 66.2 45 68.9
RcHm_v2.0_Chr7g0179931 Rosa chinensis HOM05D007939 ORTHO05D010027 2.9e-09 65.9 44 68.2
Nitab4.5_0000642g0220 Nicotiana tabacum HOM05D007939 ORTHO05D010027 6.5e-09 64.7 49 61.2
Nitab4.5_0002875g0050 Nicotiana tabacum HOM05D007939 ORTHO05D010027 1.1e-08 63.9 45 64.4
Zm00001eb302590 Zea mays HOM05D007939 ORTHO05D010027 5.5e-08 61.6 39 71.8
Peaxi162Scf00017g02235 Petunia axillaris HOM05D007939 ORTHO05D010027 7.2e-08 61.2 45 62.2
CAN.G853.35 Capsicum annuum HOM05D007939 ORTHO05D010027 9.4e-08 60.8 45 62.2
Os03g0824500 Oryza sativa ssp. japonica HOM05D007939 ORTHO05D010027 3.6e-07 58.9 40 65.0
Peaxi162Scf00689g00418 Petunia axillaris HOM05D007939 ORTHO05D010027 1.0e-06 57.4 40 70.0
Zm00001eb151290 Zea mays HOM05D007939 ORTHO05D010027 3.0e-06 55.8 39 61.5
Zm00001eb123900 Zea mays HOM05D007939 ORTHO05D010027 5.2e-06 55.1 39 61.5


User provided reference genes

Program Settings