Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10790 Beta vulgaris HOM05D008976 ORTHO05D011121 0.0e+00 1326.6 663 100.0
EL10Ac7g16632 Beta vulgaris HOM05D008976 ORTHO05D011121 1.4e-114 417.9 662 42.0
EL10Ac6g13580 Beta vulgaris HOM05D008976 ORTHO05D011121 3.9e-112 409.8 724 41.4
EL10Ac5g12917 Beta vulgaris HOM05D008976 ORTHO05D011121 4.2e-106 389.8 707 40.7
EL10Ac6g15260 Beta vulgaris HOM05D008976 ORTHO05D011121 1.1e-90 338.6 642 38.6
EL10Ac2g04471 Beta vulgaris HOM05D008976 ORTHO05D011121 1.9e-90 337.8 428 47.0
EL10Ac1g00211 Beta vulgaris HOM05D008976 ORTHO05D011121 2.4e-90 337.4 607 38.7
EL10Ac6g15678 Beta vulgaris HOM05D008976 ORTHO05D011121 8.2e-86 322.4 665 37.3
EL10Ac8g18673 Beta vulgaris HOM05D008976 ORTHO05D011121 1.1e-85 322.0 679 36.7
EL10Ac5g11650 Beta vulgaris HOM05D008976 ORTHO05D011121 3.1e-77 293.9 603 35.3
EL10Ac6g14951 Beta vulgaris HOM05D008976 ORTHO05D011121 5.9e-76 289.7 634 36.0
EL10Ac4g08137 Beta vulgaris HOM05D008976 ORTHO05D011121 7.7e-76 289.3 406 42.1
EL10Ac4g09831 Beta vulgaris HOM05D008976 ORTHO05D011121 2.2e-75 287.7 478 39.5
EL10Ac3g05379 Beta vulgaris HOM05D008976 ORTHO05D011121 1.4e-74 285.0 656 35.5
EL10Ac2g04475 Beta vulgaris HOM05D008976 ORTHO05D011121 2.5e-74 284.3 440 41.6
EL10Ac1g01107 Beta vulgaris HOM05D008976 ORTHO05D011121 1.6e-73 281.6 408 40.7
EL10Ac9g21786 Beta vulgaris HOM05D008976 ORTHO05D011121 1.8e-72 278.1 635 34.0
EL10Ac4g09899 Beta vulgaris HOM05D008976 ORTHO05D011121 3.0e-72 277.3 631 35.3
EL10Ac1g01108 Beta vulgaris HOM05D008976 ORTHO05D011121 1.5e-71 275.0 652 35.7
EL10Ac1g02070 Beta vulgaris HOM05D008976 ORTHO05D011121 1.3e-70 271.9 536 35.8
EL10Ac1g00331 Beta vulgaris HOM05D008976 ORTHO05D011121 2.2e-70 271.2 382 40.3
EL10Ac7g17245 Beta vulgaris HOM05D008976 ORTHO05D011121 3.1e-69 267.3 508 37.4
EL10Ac3g06622 Beta vulgaris HOM05D008976 ORTHO05D011121 5.9e-68 263.1 373 39.1
EL10Ac4g10257 Beta vulgaris HOM05D008976 ORTHO05D011121 1.6e-65 255.0 655 32.4
EL10Ac2g04522 Beta vulgaris HOM05D008976 ORTHO05D011121 2.0e-60 238.0 401 39.2
EL10Ac8g19650 Beta vulgaris HOM05D000992 ORTHO05D006704 5.5e-50 203.4 442 33.9
EL10Ac4g09474 Beta vulgaris HOM05D000886 ORTHO05D000525 2.0e-47 194.9 281 42.3
EL10Ac2g02473 Beta vulgaris HOM05D008976 ORTHO05D011121 2.6e-47 194.5 319 36.4
EL10Ac7g17991 Beta vulgaris HOM05D008976 ORTHO05D011121 4.8e-46 190.3 172 48.8
EL10Ac5g12223 Beta vulgaris HOM05D008976 ORTHO05D011121 5.9e-44 183.3 214 44.9
EL10Ac2g02786 Beta vulgaris HOM05D008976 ORTHO05D011121 2.9e-43 181.0 233 42.9
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.3e-27 129.0 230 39.6
EL10Ac1g01670 Beta vulgaris HOM05D008976 ORTHO05D011121 6.4e-22 110.2 267 32.2
EL10Ac8g18738 Beta vulgaris HOM05D008976 ORTHO05D011121 2.3e-19 101.7 239 33.1
EL10Ac8g19341 Beta vulgaris HOM05D008976 ORTHO05D011121 2.5e-18 98.2 186 39.8
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 3.3e-18 97.8 101 50.5
EL10Ac7g16822 Beta vulgaris HOM05D008976 ORTHO05D011121 4.4e-15 87.4 125 41.6
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.9e-14 84.7 208 28.8
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.4e-14 83.6 338 25.1
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.4e-14 83.6 156 28.8
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.2e-13 81.3 169 29.0
EL10Ac6g15089 Beta vulgaris HOM05D008976 ORTHO05D011121 5.4e-13 80.5 107 43.0
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.2e-12 79.3 117 38.5
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 3.5e-12 77.8 140 35.0
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.6e-12 77.4 117 38.5
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-11 76.3 461 21.7
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-11 75.5 460 21.7
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 3.0e-11 74.7 173 28.3
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 3.0e-11 74.7 140 30.0
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.6e-11 73.6 363 25.1
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.5e-10 71.6 402 24.1
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 2.5e-10 71.6 238 26.9
DCAR_030266 Daucus carota HOM05D012331 ORTHO05D004468 7.3e-10 70.1 353 22.7
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 7.3e-10 70.1 135 29.6
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-09 68.2 182 28.0
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.8e-09 68.2 387 19.6
CSS0042776 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 3.6e-09 67.8 117 38.5
Actinidia12328 Actinidia chinensis HOM05D008219 ORTHO05D009356 4.7e-09 67.4 108 32.4
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 8.1e-09 66.6 132 30.3
EL10Ac7g17221 Beta vulgaris HOM05D008976 ORTHO05D011121 1.8e-08 65.5 102 36.3
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.8e-08 65.5 102 35.3
EL10Ac4g09690 Beta vulgaris HOM05D008976 ORTHO05D011121 2.3e-08 65.1 115 33.9
DCAR_030268 Daucus carota HOM05D012331 ORTHO05D004468 2.3e-08 65.1 353 22.1
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.3e-08 65.1 126 31.7
Sc21g0004040 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.3e-08 65.1 98 37.8
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.1e-08 64.7 153 27.5
Sc15g0000880 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.1e-08 64.7 128 29.7
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.1e-08 64.7 126 31.7
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.0e-08 64.3 121 32.2
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 6.8e-08 63.5 132 27.3
EL10Ac7g16763 Beta vulgaris HOM05D008976 ORTHO05D011121 1.2e-07 62.8 117 36.8
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.2e-07 62.8 153 26.8
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 1.2e-07 62.8 153 26.8
Sc15g0001330 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.2e-07 62.8 126 30.2
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.5e-07 62.4 180 24.4
Sc01g0007590 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.4e-07 61.2 95 32.6
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 7.5e-07 60.1 249 25.3
Gorai.007G194800 Gossypium raimondii HOM05D049450 ORTHO05D009356 7.5e-07 60.1 136 27.9
HanXRQChr05g0136121 Helianthus annuus HOM05D000003 ORTHO05D000004 7.5e-07 60.1 371 21.0
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 9.9e-07 59.7 138 33.3
Medtr2g103400 Medicago truncatula HOM05D002777 ORTHO05D001516 1.3e-06 59.3 138 28.3
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 1.7e-06 58.9 178 24.2
vmacro10949 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.7e-06 58.9 127 29.1
Lsat_1_v5_gn_8_26961 Lactuca sativa HOM05D003915 ORTHO05D005386 2.2e-06 58.5 125 33.6
Gohir.D11G182850 Gossypium hirsutum HOM05D049450 ORTHO05D015081 2.9e-06 58.2 144 27.1
Rhsim01G0053100 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.7e-06 57.8 104 27.9
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.9e-06 57.4 161 26.7
Lsat_1_v5_gn_2_49501 Lactuca sativa HOM05D003915 ORTHO05D005386 4.9e-06 57.4 126 30.2
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 6.4e-06 57.0 130 28.5
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.3e-06 56.6 132 32.6


User provided reference genes

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