Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.8e-153 545.8 264 100.0
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.2e-117 426.8 264 74.6
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 2.0e-115 419.5 264 73.5
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.7e-114 416.4 263 75.3
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 8.2e-114 414.1 264 72.3
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 1.4e-113 413.3 264 71.6
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 5.3e-113 411.4 264 72.3
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 9.1e-113 410.6 264 71.2
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 2.0e-112 409.5 264 70.8
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 5.0e-111 404.8 264 70.8
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 5.0e-111 404.8 264 71.6
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 6.5e-111 404.4 257 75.1
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 2.5e-110 402.5 262 69.5
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 3.2e-110 402.1 264 69.3
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.2e-109 400.2 253 73.5
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 1.6e-109 399.8 262 70.2
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 3.6e-109 398.7 264 72.0
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 7.9e-109 397.5 253 71.5
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 1.8e-108 396.4 256 71.5
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.3e-108 396.0 253 71.5
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.3e-108 396.0 264 71.2
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 2.0e-107 392.9 252 71.0
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 7.4e-107 391.0 264 69.7
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 8.2e-106 387.5 265 70.2
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.1e-105 387.1 270 68.5
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.4e-105 386.7 255 69.0
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.8e-105 386.3 262 68.7
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 5.3e-105 384.8 261 67.8
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 7.0e-105 384.4 266 69.9
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 7.0e-105 384.4 261 68.2
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.6e-104 383.3 261 68.2
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 2.6e-104 382.5 261 67.8
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 4.5e-104 381.7 264 67.8
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 4.5e-104 381.7 264 67.4
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 5.9e-104 381.3 256 69.1
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 7.7e-104 380.9 253 70.4
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.7e-103 379.8 265 67.5
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 3.8e-103 378.6 255 69.4
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 3.2e-102 375.6 262 67.2
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 9.4e-102 374.0 256 68.4
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.6e-101 373.2 256 68.4
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 2.1e-101 372.9 256 68.0
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.6e-101 372.1 256 68.0
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 3.6e-101 372.1 261 67.4
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 3.6e-101 372.1 261 67.8
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 3.6e-101 372.1 259 67.2
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 8.0e-101 370.9 265 66.8
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 1.8e-100 369.8 268 65.7
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 2.3e-100 369.4 253 67.6
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 2.3e-100 369.4 265 66.0
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 6.7e-100 367.9 253 67.2
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 4.8e-98 361.7 267 64.8
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 8.2e-98 360.9 264 65.9
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 1.1e-97 360.5 298 58.1
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 2.4e-97 359.4 220 74.1
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 9.1e-97 357.5 265 65.7
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 1.6e-96 356.7 260 64.2
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 2.0e-96 356.3 262 64.5
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.9e-96 354.8 262 64.5
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 5.9e-96 354.8 254 66.5
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 8.5e-95 350.9 225 69.8
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.1e-94 350.5 248 66.5
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 6.8e-92 341.3 253 64.0
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 4.8e-90 335.1 265 62.6
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.4e-89 332.8 263 60.1
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 1.2e-88 330.5 264 61.4
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 5.9e-88 328.2 256 63.3
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 3.8e-87 325.5 210 71.9
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 2.5e-86 322.8 220 65.9
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.2e-82 309.7 261 58.2
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 7.3e-78 294.7 254 57.9
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 9.5e-78 294.3 228 61.8
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 8.0e-77 291.2 224 61.2
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 5.7e-75 285.0 179 73.2
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 4.1e-73 278.9 178 73.6
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 8.3e-66 254.6 181 68.5
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 7.0e-65 251.5 169 71.6
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 7.0e-65 251.5 169 71.6
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 7.3e-54 214.9 179 57.0
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 4.7e-53 212.2 132 71.2
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 4.7e-53 212.2 282 44.7
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 6.8e-52 208.4 161 62.1
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 4.6e-48 195.7 201 50.7
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.7e-47 193.7 121 73.6
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 1.4e-44 184.1 100 81.0
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 5.2e-44 182.2 131 64.1
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 2.7e-40 169.9 155 52.9
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.1e-33 147.9 118 58.5
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.0e-31 141.4 106 59.4
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 9.6e-30 134.8 315 30.2
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.8e-29 133.3 315 30.2
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 6.4e-26 122.1 98 59.2
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 2.4e-25 120.2 113 59.3
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.8e-21 106.7 60 75.0
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 2.4e-20 103.6 92 54.3
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 4.0e-20 102.8 60 71.7
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 3.9e-15 86.3 75 57.3


User provided reference genes

Program Settings