Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10782 Beta vulgaris HOM05D011779 ORTHO05D014917 9.2e-99 363.6 192 100.0
EL10Ac5g10780 Beta vulgaris HOM05D011779 ORTHO05D014917 8.1e-95 350.5 192 96.9
EL10Ac5g10779 Beta vulgaris HOM05D011779 ORTHO05D014917 5.8e-93 344.4 189 95.8
EL10Ac4g09594 Beta vulgaris HOM05D011779 ORTHO05D014917 7.1e-67 257.7 186 71.0
EL10Ac3g05775 Beta vulgaris HOM05D011779 ORTHO05D014917 6.0e-66 254.6 187 71.1
AUR62008233 Chenopodium quinoa HOM05D011779 ORTHO05D014917 7.9e-66 254.2 192 68.8
AUR62008236 Chenopodium quinoa HOM05D011779 ORTHO05D014917 7.9e-66 254.2 192 68.8
EL10Ac4g09254 Beta vulgaris HOM05D011779 ORTHO05D014917 1.3e-65 253.4 190 66.8
EL10Ac4g09255 Beta vulgaris HOM05D011779 ORTHO05D014917 1.3e-65 253.4 190 66.8
AUR62030987 Chenopodium quinoa HOM05D011779 ORTHO05D014917 2.3e-65 252.7 192 69.8
AUR62008232 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.1e-64 250.4 192 67.7
AUR62030986 Chenopodium quinoa HOM05D011779 ORTHO05D014917 6.9e-62 241.1 183 67.8
AUR62030988 Chenopodium quinoa HOM05D011779 ORTHO05D014917 3.4e-61 238.8 176 69.3
AUR62005137 Chenopodium quinoa HOM05D011779 ORTHO05D137585 9.7e-40 167.5 192 50.0
AUR62038735 Chenopodium quinoa HOM05D011779 ORTHO05D137918 9.7e-40 167.5 195 47.2
AUR62020643 Chenopodium quinoa HOM05D011779 ORTHO05D137858 1.8e-38 163.3 195 47.2
Haze_13849 Corylus avellana HOM05D000281 ORTHO05D000290 4.5e-13 79.0 191 27.2
CiPaw.05G217500 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.5e-11 73.9 203 27.6
Lj1P982T31 Lonicera japonica HOM05D000281 ORTHO05D000290 3.3e-11 72.8 200 27.5
Peaxi162Scf01013g00016 Petunia axillaris HOM05D000281 ORTHO05D000290 7.3e-11 71.6 178 28.7
Oeu028536.1 Olea europaea HOM05D000281 ORTHO05D000290 9.5e-11 71.2 184 23.9
Solyc11g019910.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 9.5e-11 71.2 185 26.5
MD07G1255800 Malus domestica HOM05D000281 ORTHO05D000290 1.2e-10 70.9 178 25.3
CiPaw.05G218400 Carya illinoinensis HOM05D000281 ORTHO05D000290 2.8e-10 69.7 175 29.1
PGSC0003DMG400027617 Solanum tuberosum HOM05D000281 ORTHO05D000290 2.8e-10 69.7 185 26.5
MD00G1105000 Malus domestica HOM05D000281 ORTHO05D000290 1.4e-09 67.4 182 25.3
MELO3C006821.2 Cucumis melo HOM05D000281 ORTHO05D000290 2.3e-09 66.6 188 27.1
Manes.14G034600 Manihot esculenta HOM05D000281 ORTHO05D000290 3.1e-09 66.2 188 27.1
QL09p019191 Quercus lobata HOM05D000281 ORTHO05D000290 3.1e-09 66.2 188 24.5
CiPaw.03G095300 Carya illinoinensis HOM05D000281 ORTHO05D000290 4.0e-09 65.9 191 27.7
DCAR_018096 Daucus carota HOM05D000281 ORTHO05D000290 5.2e-09 65.5 184 32.6
RcHm_v2.0_Chr1g0374721 Rosa chinensis HOM05D000281 ORTHO05D000290 5.2e-09 65.5 189 26.5
Haze_13856 Corylus avellana HOM05D000281 ORTHO05D000290 6.8e-09 65.1 176 27.3
QL09p019199 Quercus lobata HOM05D000281 ORTHO05D000290 6.8e-09 65.1 186 23.1
FvH4_7g27850 Fragaria vesca HOM05D000281 ORTHO05D000290 8.9e-09 64.7 189 25.9
FAN06G2202 Fragaria x ananassa HOM05D000281 ORTHO05D000290 8.9e-09 64.7 189 25.9
FAN06G3115 Fragaria x ananassa HOM05D000281 ORTHO05D000290 8.9e-09 64.7 189 25.9
Manes.06G136300 Manihot esculenta HOM05D000281 ORTHO05D000290 1.5e-08 63.9 186 25.8
Ciclev10005968m.g Citrus clementina HOM05D000281 ORTHO05D000290 2.0e-08 63.5 183 25.1
FAN03G3160 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.0e-08 63.5 187 25.7
FAN10G1534 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.6e-08 63.2 167 25.7
Prupe.2G279900 Prunus persica HOM05D000281 ORTHO05D000290 2.6e-08 63.2 183 23.5
FAN10G1748 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.4e-08 62.8 189 25.4
FAN03G2116 Fragaria x ananassa HOM05D000281 ORTHO05D000290 4.4e-08 62.4 189 25.4
Potri.012G127400 Populus trichocarpa HOM05D000281 ORTHO05D000290 4.4e-08 62.4 169 26.6
ClCG05G007400 Citrullus lanatus HOM05D000036 ORTHO05D000095 5.8e-08 62.0 189 27.0
CsaV3_3G016230 Cucumis sativus L. HOM05D000281 ORTHO05D000290 5.8e-08 62.0 190 26.8
FvH4_7g27830 Fragaria vesca HOM05D000281 ORTHO05D000290 5.8e-08 62.0 167 25.7
FAN06G1663 Fragaria x ananassa HOM05D000281 ORTHO05D000290 5.8e-08 62.0 167 25.7
Sed0002531 Sechium edule HOM05D000281 ORTHO05D000290 9.8e-08 61.2 166 24.7
Cfa008205 Carpinus fangiana HOM05D000281 ORTHO05D000290 1.3e-07 60.8 187 25.7
MBI12_g20408_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 1.3e-07 60.8 189 23.8
Sopen03g023510 Solanum pennellii HOM05D000281 ORTHO05D000290 1.3e-07 60.8 190 26.8
Cfa008212 Carpinus fangiana HOM05D000281 ORTHO05D000290 1.7e-07 60.5 187 23.0
Haze_13846 Corylus avellana HOM05D000281 ORTHO05D000290 1.7e-07 60.5 187 23.5
TAR374G0916 Trochodendron aralioides HOM05D000281 ORTHO05D000290 1.7e-07 60.5 188 25.0
Sed0006522 Sechium edule HOM05D000281 ORTHO05D000290 2.2e-07 60.1 187 23.5
ATR0564G060 Amborella trichopoda HOM05D000281 ORTHO05D000290 2.9e-07 59.7 202 26.7
Dinv28554 Davidia involucrata HOM05D000281 ORTHO05D000290 2.9e-07 59.7 171 24.0
Lj8C40T5 Lonicera japonica HOM05D000281 ORTHO05D000290 2.9e-07 59.7 184 25.0
Rhsim03G0168900 Rhododendron simsii HOM05D000281 ORTHO05D000290 2.9e-07 59.7 183 25.7
Nitab4.5_0003732g0010 Nicotiana tabacum HOM05D000281 ORTHO05D000290 3.7e-07 59.3 183 22.4
TAR629G0898 Trochodendron aralioides HOM05D000281 ORTHO05D000290 3.7e-07 59.3 188 25.0
Cpa.g.sc3.304 Carica papaya HOM05D000281 ORTHO05D000290 4.9e-07 58.9 188 26.1
DCAR_020198 Daucus carota HOM05D000281 ORTHO05D000290 6.4e-07 58.5 196 26.0
CiPaw.04G061300 Carya illinoinensis HOM05D000281 ORTHO05D000290 8.3e-07 58.2 184 22.8
Eucgr.E00463 Eucalyptus grandis HOM05D000281 ORTHO05D000290 1.1e-06 57.8 193 24.4
THA.LOC104821406 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 1.1e-06 57.8 188 23.4
MBI04_g11450_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 1.4e-06 57.4 185 24.9
Migut.O00299 Erythranthe guttata HOM05D000281 ORTHO05D000290 1.9e-06 57.0 189 25.9
FAN03G3274 Fragaria x ananassa HOM05D000137 ORTHO05D000290 1.9e-06 57.0 180 25.0
CSS0033498 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 2.4e-06 56.6 160 25.0
Haze_13850 Corylus avellana HOM05D000281 ORTHO05D000290 2.4e-06 56.6 186 24.7
Eucgr.K00155 Eucalyptus grandis HOM05D000281 ORTHO05D000290 2.4e-06 56.6 189 26.5
CiPaw.03G095500 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.2e-06 56.2 171 21.1
CiPaw.05G218500 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.2e-06 56.2 183 24.6
Nn6g34063 Nelumbo nucifera HOM05D000281 ORTHO05D000290 4.1e-06 55.8 165 26.1
Peaxi162Scf00241g00059 Petunia axillaris HOM05D000281 ORTHO05D000290 4.1e-06 55.8 183 21.3
Sopen03g023520 Solanum pennellii HOM05D000281 ORTHO05D000290 4.1e-06 55.8 197 25.4
MBI12_g20409_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 5.4e-06 55.5 168 22.6
Actinidia03078 Actinidia chinensis HOM05D000281 ORTHO05D000290 7.0e-06 55.1 175 20.6
ECA238G0978 Erigeron canadensis HOM05D000281 ORTHO05D000290 7.0e-06 55.1 144 26.4
Medtr4g101760 Medicago truncatula HOM05D000281 ORTHO05D000290 7.0e-06 55.1 189 25.9
Phvul.005G007700 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 9.2e-06 54.7 155 27.1
THA.LOC104825066 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 9.2e-06 54.7 186 25.3


User provided reference genes

Program Settings