Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10779 Beta vulgaris HOM05D011779 ORTHO05D014917 9.1e-179 630.2 330 100.0
EL10Ac5g10780 Beta vulgaris HOM05D011779 ORTHO05D014917 6.9e-94 348.2 189 95.8
EL10Ac5g10782 Beta vulgaris HOM05D011779 ORTHO05D014917 5.8e-93 345.1 189 95.8
EL10Ac4g09594 Beta vulgaris HOM05D011779 ORTHO05D014917 2.7e-66 256.5 183 70.5
EL10Ac3g05775 Beta vulgaris HOM05D011779 ORTHO05D014917 4.4e-64 249.2 184 69.6
AUR62030987 Chenopodium quinoa HOM05D011779 ORTHO05D014917 4.4e-64 249.2 189 69.3
AUR62008233 Chenopodium quinoa HOM05D011779 ORTHO05D014917 5.7e-64 248.8 189 67.7
AUR62008236 Chenopodium quinoa HOM05D011779 ORTHO05D014917 5.7e-64 248.8 189 67.7
EL10Ac4g09254 Beta vulgaris HOM05D011779 ORTHO05D014917 9.7e-64 248.1 186 67.2
EL10Ac4g09255 Beta vulgaris HOM05D011779 ORTHO05D014917 9.7e-64 248.1 186 67.2
AUR62008232 Chenopodium quinoa HOM05D011779 ORTHO05D014917 8.2e-63 245.0 189 66.7
AUR62030986 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.0e-60 238.0 180 67.2
AUR62030988 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.1e-59 234.6 173 68.2
AUR62005137 Chenopodium quinoa HOM05D011779 ORTHO05D137585 1.4e-38 164.5 189 48.7
AUR62038735 Chenopodium quinoa HOM05D011779 ORTHO05D137918 1.4e-38 164.5 192 46.9
AUR62020643 Chenopodium quinoa HOM05D011779 ORTHO05D137858 4.6e-37 159.5 192 46.4
Haze_13849 Corylus avellana HOM05D000281 ORTHO05D000290 2.7e-13 80.5 188 28.7
Oeu028536.1 Olea europaea HOM05D000281 ORTHO05D000290 1.9e-11 74.3 185 24.9
Solyc11g019910.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 1.9e-11 74.3 186 26.9
Peaxi162Scf01013g00016 Petunia axillaris HOM05D000281 ORTHO05D000290 7.3e-11 72.4 196 29.1
PGSC0003DMG400027617 Solanum tuberosum HOM05D000281 ORTHO05D000290 9.6e-11 72.0 185 27.0
CiPaw.05G217500 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.6e-10 71.2 191 26.7
CiPaw.05G218400 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.6e-10 70.1 182 27.5
MELO3C006821.2 Cucumis melo HOM05D000281 ORTHO05D000290 4.7e-10 69.7 188 28.2
MD07G1255800 Malus domestica HOM05D000281 ORTHO05D000290 8.1e-10 68.9 182 24.7
Lj1P982T31 Lonicera japonica HOM05D000281 ORTHO05D000290 1.8e-09 67.8 197 26.9
Manes.14G034600 Manihot esculenta HOM05D000281 ORTHO05D000290 2.4e-09 67.4 182 26.4
QL09p019191 Quercus lobata HOM05D000281 ORTHO05D000290 3.1e-09 67.0 188 25.5
RcHm_v2.0_Chr1g0374721 Rosa chinensis HOM05D000281 ORTHO05D000290 4.0e-09 66.6 183 25.1
Ciclev10005968m.g Citrus clementina HOM05D000281 ORTHO05D000290 5.2e-09 66.2 187 25.7
CiPaw.03G095300 Carya illinoinensis HOM05D000281 ORTHO05D000290 6.8e-09 65.9 192 27.1
FvH4_7g27850 Fragaria vesca HOM05D000281 ORTHO05D000290 6.8e-09 65.9 183 24.6
FAN06G2202 Fragaria x ananassa HOM05D000281 ORTHO05D000290 6.8e-09 65.9 183 24.6
FAN06G3115 Fragaria x ananassa HOM05D000281 ORTHO05D000290 6.8e-09 65.9 183 24.6
QL09p019199 Quercus lobata HOM05D000281 ORTHO05D000290 6.8e-09 65.9 186 24.2
MD00G1105000 Malus domestica HOM05D000281 ORTHO05D000290 1.5e-08 64.7 185 24.9
Haze_13856 Corylus avellana HOM05D000281 ORTHO05D000290 2.0e-08 64.3 169 28.4
CsaV3_3G016230 Cucumis sativus L. HOM05D000281 ORTHO05D000290 2.0e-08 64.3 187 28.3
DCAR_018096 Daucus carota HOM05D000281 ORTHO05D000290 2.0e-08 64.3 185 31.4
FAN03G3160 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.0e-08 64.3 199 24.6
FAN10G1748 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.6e-08 63.9 183 24.0
FAN03G2116 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.4e-08 63.5 183 24.0
ClCG05G007400 Citrullus lanatus HOM05D000036 ORTHO05D000095 5.8e-08 62.8 187 27.3
THA.LOC104821406 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 5.8e-08 62.8 193 26.4
Lj8C40T5 Lonicera japonica HOM05D000281 ORTHO05D000290 7.6e-08 62.4 184 25.5
Rhsim03G0168900 Rhododendron simsii HOM05D000281 ORTHO05D000290 7.6e-08 62.4 181 26.5
Sed0002531 Sechium edule HOM05D000281 ORTHO05D000290 7.6e-08 62.4 166 25.3
FAN10G1534 Fragaria x ananassa HOM05D000281 ORTHO05D000290 9.9e-08 62.0 164 25.0
Manes.06G136300 Manihot esculenta HOM05D000281 ORTHO05D000290 9.9e-08 62.0 186 25.3
Sopen03g023510 Solanum pennellii HOM05D000281 ORTHO05D000290 1.3e-07 61.6 191 27.7
FvH4_7g27830 Fragaria vesca HOM05D000281 ORTHO05D000290 1.7e-07 61.2 165 24.8
MBI12_g20408_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 1.7e-07 61.2 182 22.5
Nitab4.5_0003732g0010 Nicotiana tabacum HOM05D000281 ORTHO05D000290 1.7e-07 61.2 183 22.4
TAR374G0916 Trochodendron aralioides HOM05D000281 ORTHO05D000290 1.7e-07 61.2 193 24.4
Sed0006522 Sechium edule HOM05D000281 ORTHO05D000290 2.2e-07 60.8 182 25.3
DCAR_020198 Daucus carota HOM05D000281 ORTHO05D000290 2.9e-07 60.5 177 26.0
TAR629G0898 Trochodendron aralioides HOM05D000281 ORTHO05D000290 2.9e-07 60.5 188 24.5
ATR0564G060 Amborella trichopoda HOM05D000281 ORTHO05D000290 3.8e-07 60.1 213 26.3
Cfa008205 Carpinus fangiana HOM05D000281 ORTHO05D000290 4.9e-07 59.7 187 24.6
CiPaw.04G061300 Carya illinoinensis HOM05D000281 ORTHO05D000290 4.9e-07 59.7 184 22.8
Prupe.2G279900 Prunus persica HOM05D000281 ORTHO05D000290 4.9e-07 59.7 183 23.5
RcHm_v2.0_Chr1g0374701 Rosa chinensis HOM05D000281 ORTHO05D000290 6.4e-07 59.3 164 25.0
Potri.012G127400 Populus trichocarpa HOM05D000281 ORTHO05D000290 1.1e-06 58.5 191 25.1
FAN06G1663 Fragaria x ananassa HOM05D000281 ORTHO05D000290 1.4e-06 58.2 191 24.1
Cpa.g.sc3.304 Carica papaya HOM05D000281 ORTHO05D000290 1.9e-06 57.8 188 25.5
Eucgr.K00155 Eucalyptus grandis HOM05D000281 ORTHO05D000290 1.9e-06 57.8 189 26.5
CSS0033498 Camellia sinensis var. sinensis HOM05D000281 ORTHO05D000290 2.4e-06 57.4 160 25.0
Cfa008212 Carpinus fangiana HOM05D000281 ORTHO05D000290 2.4e-06 57.4 187 22.5
Haze_13846 Corylus avellana HOM05D000281 ORTHO05D000290 2.4e-06 57.4 187 23.0
Nn6g34063 Nelumbo nucifera HOM05D000281 ORTHO05D000290 2.4e-06 57.4 165 26.7
CiPaw.03G095500 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.2e-06 57.0 171 21.1
Eucgr.E00463 Eucalyptus grandis HOM05D000281 ORTHO05D000290 3.2e-06 57.0 189 24.3
Ciclev10007178m.g Citrus clementina HOM05D000281 ORTHO05D000290 4.2e-06 56.6 176 23.9
BcaB07g29783 Brassica carinata HOM05D000281 ORTHO05D000290 5.4e-06 56.2 182 23.1
Haze_13850 Corylus avellana HOM05D000281 ORTHO05D000290 5.4e-06 56.2 192 24.0
Dinv28554 Davidia involucrata HOM05D000281 ORTHO05D000290 7.1e-06 55.8 178 22.5
FAN03G3274 Fragaria x ananassa HOM05D000137 ORTHO05D000290 7.1e-06 55.8 180 25.0
MBI12_g40384_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 7.1e-06 55.8 170 21.8
Medtr4g101760 Medicago truncatula HOM05D000281 ORTHO05D000290 7.1e-06 55.8 197 24.9
Nitab4.5_0000262g0190 Nicotiana tabacum HOM05D000281 ORTHO05D000290 7.1e-06 55.8 183 21.3
Phvul.005G007700 Phaseolus vulgaris HOM05D000281 ORTHO05D000290 7.1e-06 55.8 155 27.7
CiPaw.05G218500 Carya illinoinensis HOM05D000281 ORTHO05D000290 9.3e-06 55.5 182 24.2
ECA238G0978 Erigeron canadensis HOM05D000281 ORTHO05D000290 9.3e-06 55.5 144 26.4
Migut.F00458 Erythranthe guttata HOM05D000281 ORTHO05D000290 9.3e-06 55.5 187 21.4
Migut.O00299 Erythranthe guttata HOM05D000281 ORTHO05D000290 9.3e-06 55.5 190 25.3
Glyma.04G118900 Glycine max HOM05D000281 ORTHO05D000290 9.3e-06 55.5 163 23.3
MBI12_g20409_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 9.3e-06 55.5 170 21.8
Prupe.2G279700 Prunus persica HOM05D000281 ORTHO05D000290 9.3e-06 55.5 183 24.6
Sopen03g023520 Solanum pennellii HOM05D000281 ORTHO05D000290 9.3e-06 55.5 167 25.1
THA.LOC104825066 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 9.3e-06 55.5 186 25.3
VMungo1080G0988 Vigna mungo HOM05D000281 ORTHO05D000290 9.3e-06 55.5 163 23.3


User provided reference genes

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