Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 0.0e+00 2135.5 1060 100.0
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 0.0e+00 1444.5 1074 71.2
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 0.0e+00 1389.0 1074 69.2
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 0.0e+00 1338.2 1174 61.9
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 0.0e+00 1225.3 1082 61.3
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 8.2e-290 1000.7 1101 52.3
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 8.7e-231 804.7 1145 44.6
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 1.6e-229 800.4 1133 45.5
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 2.6e-227 793.1 1073 45.3
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 3.8e-226 789.3 1157 44.2
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.2e-225 786.2 1129 44.7
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 3.2e-225 786.2 1140 44.6
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 3.2e-225 786.2 1097 45.9
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.3e-223 780.8 1163 44.1
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 6.2e-221 771.9 1166 43.4
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 8.1e-221 771.5 1144 43.7
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-220 771.2 1154 43.3
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.4e-220 770.8 1148 43.2
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.4e-220 770.0 1145 43.8
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.6e-219 766.5 1145 43.8
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 7.6e-219 765.0 1145 43.9
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 3.8e-218 762.7 1151 43.5
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 4.9e-218 762.3 1115 43.0
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 8.4e-218 761.5 1058 46.1
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.2e-217 759.6 1110 44.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 3.2e-217 759.6 1144 43.1
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 4.2e-217 759.2 1170 43.0
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.0e-215 753.1 1122 43.3
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 6.7e-215 751.9 1100 43.9
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 9.6e-214 748.0 1079 43.6
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 8.1e-213 745.0 1078 45.0
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 2.4e-212 743.4 1113 42.9
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 2.4e-212 743.4 1122 42.9
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.1e-212 743.0 1198 40.8
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 3.1e-212 743.0 1079 45.0
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 3.1e-212 743.0 1168 41.2
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 5.3e-212 742.3 1129 42.8
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 4.5e-211 739.2 1191 42.1
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 1.3e-210 737.6 1049 42.6
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 1.9e-209 733.8 1157 42.3
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.2e-208 731.1 1221 40.9
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 4.6e-208 729.2 1172 41.3
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 6.0e-208 728.8 1122 43.5
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 2.3e-207 726.9 1122 43.4
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 4.8e-205 719.2 1091 43.1
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.8e-204 717.2 1137 42.2
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 2.4e-204 716.8 1108 42.1
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 9.0e-204 714.9 1112 41.8
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 5.8e-203 712.2 1059 43.2
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 5.8e-203 712.2 880 47.8
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 3.8e-202 709.5 1157 40.8
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 8.4e-202 708.4 932 45.1
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 7.1e-201 705.3 1100 42.2
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 7.1e-201 705.3 1124 42.3
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 9.3e-201 704.9 1088 41.4
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 4.6e-200 702.6 1136 42.0
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 6.1e-200 702.2 1077 41.8
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 3.0e-199 699.9 1106 42.4
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 5.1e-199 699.1 1086 42.4
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 6.3e-197 692.2 1101 41.9
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 6.9e-196 688.7 987 44.1
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 6.9e-196 688.7 987 44.1
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 9.0e-196 688.3 1079 42.3
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 9.0e-196 688.3 574 59.9
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 2.0e-195 687.2 1052 42.7
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 5.9e-195 685.6 1101 42.1
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 5.9e-195 685.6 1115 41.3
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 2.2e-194 683.7 1118 40.4
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 2.9e-194 683.3 1090 42.1
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 6.5e-194 682.2 1080 41.2
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 8.5e-194 681.8 1092 41.5
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.1e-193 681.4 1082 41.2
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 7.2e-193 678.7 1097 40.1
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 2.1e-192 677.2 1097 40.8
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.0e-191 674.9 1068 41.5
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 4.3e-190 669.5 881 45.9
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 1.1e-188 664.8 1059 41.6
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 6.9e-188 662.1 899 44.8
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 6.9e-188 662.1 1068 40.7
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 9.1e-188 661.8 551 61.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.2e-187 661.4 1120 39.9
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 2.0e-187 660.6 1066 40.8
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 7.7e-187 658.7 1109 40.2
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 7.7e-187 658.7 1095 40.3
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 1.3e-186 657.9 919 43.7
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.9e-186 656.8 1093 40.0
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 3.8e-186 656.4 1170 39.7
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 6.7e-183 645.6 1140 38.6
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 7.4e-182 642.1 1075 39.3
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 2.8e-181 640.2 1052 40.2
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 2.0e-179 634.0 980 42.6
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 9.4e-177 625.2 983 42.2
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 1.2e-171 608.2 885 42.8
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 8.0e-168 595.5 1021 38.9
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.8e-167 594.3 1072 39.2
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.8e-164 584.3 1045 39.5
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 5.0e-162 576.2 564 52.8
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.4e-159 568.2 914 42.9
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 8.8e-159 565.5 1108 38.6
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.1e-153 548.5 709 47.5
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 1.5e-126 458.4 925 37.7
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 9.9e-126 455.7 1123 33.2
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 3.6e-120 437.2 417 54.2
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.3e-117 428.7 358 60.6
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 1.1e-116 425.6 623 43.5
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.6e-115 421.8 774 36.0
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 1.1e-113 415.6 490 45.1
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.6e-112 411.8 856 38.6
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 2.8e-112 411.0 319 63.0
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 7.6e-110 402.9 545 43.1
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 1.7e-109 401.7 846 36.3
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.1e-108 399.1 437 48.7
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 4.8e-104 383.6 595 41.0
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 5.3e-71 273.9 228 63.6
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.6e-70 271.6 764 33.1
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.6e-67 262.3 695 32.5
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 6.7e-66 256.9 728 31.7
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 2.4e-63 248.4 226 56.2
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 9.5e-28 130.2 267 33.7
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 5.0e-21 107.8 388 29.9
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 3.3e-20 105.1 515 28.2
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 4.4e-17 94.7 142 38.0
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 7.5e-17 94.0 108 56.5
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 8.3e-16 90.5 80 58.8
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 7.8e-14 84.0 147 39.5
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.7e-13 82.8 58 60.3
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 5.1e-13 81.3 68 55.9
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 1.5e-12 79.7 49 69.4
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 9.5e-12 77.0 96 52.1
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.6e-11 76.3 53 60.4
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 2.8e-11 75.5 72 50.0
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.2e-09 70.1 186 32.8
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 6.0e-06 57.8 151 33.1


User provided reference genes

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