Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10709 Beta vulgaris HOM05D005765 ORTHO05D002313 5.5e-56 220.7 109 100.0
AUR62017836 Chenopodium quinoa HOM05D005765 ORTHO05D002313 7.0e-43 177.2 96 87.5
Ah.03g147540 Amaranthus hybridus HOM05D005765 ORTHO05D002313 1.6e-42 176.0 96 86.5
AUR62003522 Chenopodium quinoa HOM05D005765 ORTHO05D002313 5.9e-42 174.1 96 85.4
Hund04356 Selenicereus undatus HOM05D005765 ORTHO05D002313 8.0e-39 163.7 95 83.2
CANSAT64G0001 Cannabis sativa HOM05D005765 ORTHO05D002313 1.0e-38 163.3 96 81.2
AT5G40950 Arabidopsis thaliana HOM05D005765 ORTHO05D002313 3.3e-37 158.3 99 76.8
Oeu005105.1 Olea europaea HOM05D005765 ORTHO05D002313 3.3e-37 158.3 96 81.2
Cfa007223 Carpinus fangiana HOM05D005765 ORTHO05D002313 4.4e-37 157.9 96 80.2
Haze_14881 Corylus avellana HOM05D005765 ORTHO05D002313 5.7e-37 157.5 95 81.1
Nitab4.5_0000559g0370 Nicotiana tabacum HOM05D005765 ORTHO05D002313 5.7e-37 157.5 98 76.5
Nitab4.5_0005161g0040 Nicotiana tabacum HOM05D005765 ORTHO05D002313 5.7e-37 157.5 98 76.5
Potri.001G329500 Populus trichocarpa HOM05D005765 ORTHO05D002313 7.5e-37 157.1 96 78.1
Sp7g00970 Schrenkiella parvula HOM05D005765 ORTHO05D002313 1.7e-36 156.0 99 75.8
CARHR213430 Cardamine hirsuta HOM05D005765 ORTHO05D002313 2.2e-36 155.6 99 74.7
AL7G48600 Arabidopsis lyrata HOM05D005765 ORTHO05D002313 2.8e-36 155.2 99 73.7
Dinv25656 Davidia involucrata HOM05D005765 ORTHO05D002313 2.8e-36 155.2 96 78.1
Sabra16G0210900 Salix brachista HOM05D005765 ORTHO05D002313 2.8e-36 155.2 97 75.3
Aa31LG9G720 Aethionema arabicum HOM05D005765 ORTHO05D002313 6.3e-36 154.1 99 73.7
THA.LOC104825626 Tarenaya hassleriana HOM05D005765 ORTHO05D002313 6.3e-36 154.1 97 78.4
Atru.chr6.2579 Acer truncatum HOM05D005765 ORTHO05D002313 1.1e-35 153.3 98 75.5
ClCG11G007120 Citrullus lanatus HOM05D005765 ORTHO05D002313 1.1e-35 153.3 96 80.2
CsaV3_2G034130 Cucumis sativus L. HOM05D005765 ORTHO05D002313 1.1e-35 153.3 96 79.2
Peaxi162Scf00700g00029 Petunia axillaris HOM05D005765 ORTHO05D002313 1.8e-35 152.5 98 77.6
RcHm_v2.0_Chr2g0175661 Rosa chinensis HOM05D005765 ORTHO05D002313 2.4e-35 152.1 98 77.6
Solyc11g068820.3 Solanum lycopersicum HOM05D005765 ORTHO05D002313 2.4e-35 152.1 94 76.6
Sopen11g027540 Solanum pennellii HOM05D005765 ORTHO05D002313 2.4e-35 152.1 94 76.6
Migut.F00059 Erythranthe guttata HOM05D005765 ORTHO05D002313 3.1e-35 151.8 93 79.6
TAR374G0284 Trochodendron aralioides HOM05D005765 ORTHO05D002313 3.1e-35 151.8 94 79.8
Ciclev10016825m.g Citrus clementina HOM05D005765 ORTHO05D002313 4.1e-35 151.4 96 76.0
Thhalv10027943m.g Eutrema salsugineum HOM05D005765 ORTHO05D002313 4.1e-35 151.4 99 73.7
PGSC0003DMG400019631 Solanum tuberosum HOM05D005765 ORTHO05D002313 4.1e-35 151.4 93 77.4
CiPaw.04G036800 Carya illinoinensis HOM05D005765 ORTHO05D002313 5.3e-35 151.0 96 77.1
BcaB06g27577 Brassica carinata HOM05D005765 ORTHO05D002313 7.0e-35 150.6 99 73.7
FAN02G1386 Fragaria x ananassa HOM05D005765 ORTHO05D002313 7.0e-35 150.6 103 73.8
FAN05G2595 Fragaria x ananassa HOM05D005765 ORTHO05D002313 7.0e-35 150.6 103 73.8
FAN09G1054 Fragaria x ananassa HOM05D005765 ORTHO05D002313 7.0e-35 150.6 103 73.8
FAN14G1527 Fragaria x ananassa HOM05D005765 ORTHO05D002313 7.0e-35 150.6 103 73.8
Prupe.3G306900 Prunus persica HOM05D005765 ORTHO05D002313 7.0e-35 150.6 98 77.6
Sed0006067 Sechium edule HOM05D005765 ORTHO05D002313 7.0e-35 150.6 96 78.1
CDE05G1062 Ceratophyllum demersum HOM05D005765 ORTHO05D002313 9.1e-35 150.2 95 76.8
Sed0017038 Sechium edule HOM05D005765 ORTHO05D002313 1.2e-34 149.8 96 79.2
Gorai.006G042400 Gossypium raimondii HOM05D005765 ORTHO05D002313 1.6e-34 149.4 96 74.0
Hma1.2p1_1057F.1_g252820 Hydrangea macrophylla HOM05D005765 ORTHO05D002313 1.6e-34 149.4 95 76.8
CAN.G792.8 Capsicum annuum HOM05D005765 ORTHO05D002313 2.0e-34 149.1 92 77.2
Eucgr.I01643 Eucalyptus grandis HOM05D005765 ORTHO05D002313 2.0e-34 149.1 96 77.1
Gohir.D09G037100 Gossypium hirsutum HOM05D005765 ORTHO05D002313 2.0e-34 149.1 96 72.9
Lj7C610T3 Lonicera japonica HOM05D005765 ORTHO05D002313 2.0e-34 149.1 94 76.6
Aqoxy3G01560 Aquilegia oxysepala HOM05D005765 ORTHO05D002313 2.7e-34 148.7 94 75.5
BcaC02g08988 Brassica carinata HOM05D005765 ORTHO05D002313 2.7e-34 148.7 99 72.7
A04p14010 Brassica napus HOM05D005765 ORTHO05D002313 2.7e-34 148.7 99 72.7
C04p48040 Brassica napus HOM05D005765 ORTHO05D002313 2.7e-34 148.7 99 72.7
BolC4t26396H Brassica oleracea HOM05D005765 ORTHO05D002313 2.7e-34 148.7 99 72.7
BraA04t17063Z Brassica rapa HOM05D005765 ORTHO05D002313 2.7e-34 148.7 99 72.7
PGR142G2888 Punica granatum HOM05D005765 ORTHO05D002313 3.5e-34 148.3 84 82.1
Thecc.04G037800 Theobroma cacao HOM05D005765 ORTHO05D002313 3.5e-34 148.3 96 74.0
CDE05G3217 Ceratophyllum demersum HOM05D005765 ORTHO05D002313 4.5e-34 147.9 95 73.7
MD17G1000400 Malus domestica HOM05D005765 ORTHO05D002313 4.5e-34 147.9 98 73.5
QL02p071244 Quercus lobata HOM05D005765 ORTHO05D002313 7.7e-34 147.1 95 72.6
SGA_v2.0_scaffold44G16916 Striga asiatica HOM05D005765 ORTHO05D002313 7.7e-34 147.1 96 75.0
TWI34G0325 Tripterygium wilfordii HOM05D005765 ORTHO05D002313 1.3e-33 146.4 96 75.0
FvH4_6g53590 Fragaria vesca HOM05D005765 ORTHO05D002313 2.2e-33 145.6 98 74.5
Manes.15G161500 Manihot esculenta HOM05D005765 ORTHO05D002313 2.2e-33 145.6 83 83.1
CSS0026879 Camellia sinensis var. sinensis HOM05D005765 ORTHO05D002313 2.9e-33 145.2 94 74.5
Carub.0007s3455 Capsella rubella HOM05D005765 ORTHO05D002313 5.0e-33 144.4 99 70.7
MBI11_g24616_MAGBIO Magnolia biondii HOM05D005765 ORTHO05D002313 5.0e-33 144.4 96 75.0
SalBow4G0293 Salvia bowleyana HOM05D005765 ORTHO05D002313 5.0e-33 144.4 99 73.7
SalBow4G2955 Salvia bowleyana HOM05D005765 ORTHO05D002313 5.0e-33 144.4 99 73.7
Gohir.A09G036100 Gossypium hirsutum HOM05D005765 ORTHO05D002313 6.5e-33 144.1 96 71.9
MD09G1010200 Malus domestica HOM05D005765 ORTHO05D002313 6.5e-33 144.1 98 71.4
TWI34G1681 Tripterygium wilfordii HOM05D005765 ORTHO05D002313 6.5e-33 144.1 96 74.0
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 8.5e-33 143.7 96 74.0
DCAR_015103 Daucus carota HOM05D005765 ORTHO05D002313 8.5e-33 143.7 96 71.9
HanXRQChr14g0450801 Helianthus annuus HOM05D005765 ORTHO05D002313 8.5e-33 143.7 116 65.5
VMungo1080G1067 Vigna mungo HOM05D005765 ORTHO05D002313 1.1e-32 143.3 96 75.0
Duzib187G1674 Durio zibethinus HOM05D005765 ORTHO05D002313 1.5e-32 142.9 96 70.8
Cc07_g00870 Coffea canephora HOM05D005765 ORTHO05D002313 1.9e-32 142.5 99 72.7
PSO017G0717 Papaver somniferum HOM05D005765 ORTHO05D002313 2.5e-32 142.1 94 70.2
PSO478G4423 Papaver somniferum HOM05D005765 ORTHO05D002313 2.5e-32 142.1 94 70.2
GSVIVG01033086001 Vitis vinifera HOM05D005765 ORTHO05D002313 7.2e-32 140.6 96 71.9
ECA238G0681 Erigeron canadensis HOM05D005765 ORTHO05D002313 1.6e-31 139.4 98 74.5
Glyma.11G151300 Glycine max HOM05D005765 ORTHO05D002313 1.6e-31 139.4 96 72.9
arahy.Tifrunner.gnm1.ann1.JYGZ5B Arachis hypogaea HOM05D005765 ORTHO05D002313 2.1e-31 139.0 96 71.9
arahy.Tifrunner.gnm1.ann1.ZMYY1J Arachis hypogaea HOM05D005765 ORTHO05D002313 2.1e-31 139.0 96 71.9
ATR0561G222 Amborella trichopoda HOM05D005765 ORTHO05D002313 2.7e-31 138.7 86 76.7
Lsat_1_v5_gn_2_93120 Lactuca sativa HOM05D005765 ORTHO05D002313 2.7e-31 138.7 104 70.2
Nn3g16448 Nelumbo nucifera HOM05D005765 ORTHO05D002313 8.0e-31 137.1 96 70.8
CDE05G0355 Ceratophyllum demersum HOM05D005765 ORTHO05D002313 1.0e-30 136.7 91 73.6
Glyma.04G139200 Glycine max HOM05D005765 ORTHO05D002313 3.0e-30 135.2 96 70.8
Phvul.005G031700 Phaseolus vulgaris HOM05D005765 ORTHO05D002313 3.0e-30 135.2 96 69.8
Rhsim08G0042600 Rhododendron simsii HOM05D005765 ORTHO05D002313 8.8e-30 133.7 93 71.0
Lj3g0012175 Lotus japonicus HOM05D005765 ORTHO05D002313 2.6e-29 132.1 96 67.7
arahy.Tifrunner.gnm1.ann1.C2TYHM Arachis hypogaea HOM05D005765 ORTHO05D002313 3.4e-29 131.7 96 70.8
arahy.Tifrunner.gnm1.ann1.9892BY Arachis hypogaea HOM05D005765 ORTHO05D002313 4.4e-29 131.3 96 69.8
Ca_14305_v3 Cicer arietinum L. HOM05D005765 ORTHO05D002313 9.8e-29 130.2 94 67.0
Lalb_Chr18g0046701 Lupinus albus HOM05D005765 ORTHO05D002313 1.3e-28 129.8 87 70.1
Psat5g215240 Pisum sativum HOM05D005765 ORTHO05D002313 2.2e-28 129.0 84 71.4
HPP92_025265 Vanilla planifolia HOM05D005765 ORTHO05D002313 1.4e-27 126.3 83 74.7
HPP92_025270 Vanilla planifolia HOM05D005765 ORTHO05D002313 1.4e-27 126.3 85 72.9
vmacro18349 Vaccinium macrocarpon HOM05D005765 ORTHO05D002313 7.0e-27 124.0 103 63.1
unitig_0.g1924 Utricularia gibba HOM05D005765 ORTHO05D002313 2.7e-26 122.1 78 74.4
Medtr3g020680 Medicago truncatula HOM05D005765 ORTHO05D002313 3.5e-26 121.7 96 62.5
Pp3c21_16170 Physcomitrium patens HOM05D005765 ORTHO05D002313 8.6e-25 117.1 98 59.2
Lalb_Chr04g0259971 Lupinus albus HOM05D005765 ORTHO05D002313 1.5e-24 116.3 66 78.8
SEGI_37399 Sequoiadendron giganteum HOM05D005765 ORTHO05D002313 5.5e-24 114.4 97 61.9
Pp3c18_9840 Physcomitrium patens HOM05D005765 ORTHO05D002313 8.0e-23 110.5 94 56.4
AagrBONN_evm.TU.Sc2ySwM_362.2457 Anthoceros agrestis HOM05D005765 ORTHO05D002313 5.4e-19 97.8 103 53.4
SMO334G0113 Selaginella moellendorffii HOM05D005765 ORTHO05D002313 7.0e-19 97.4 71 62.0
AagrBONN_evm.TU.Sc2ySwM_368.1099 Anthoceros agrestis HOM05D005765 ORTHO05D002313 9.2e-19 97.1 103 52.4
Actinidia30872 Actinidia chinensis HOM05D005765 ORTHO05D002313 3.5e-18 95.1 73 69.9
arahy.Tifrunner.gnm1.ann1.KHI48J Arachis hypogaea HOM05D000501 ORTHO05D000376 2.9e-17 92.0 76 61.8
Mapoly0027s0011 Marchantia polymorpha HOM05D005765 ORTHO05D002313 1.1e-16 90.1 109 46.8
arahy.Tifrunner.gnm1.ann1.6IU2DD Arachis hypogaea HOM05D000501 ORTHO05D000376 3.3e-16 88.6 72 62.5
arahy.Tifrunner.gnm1.ann1.4M6ER6 Arachis hypogaea HOM05D000759 ORTHO05D000574 2.8e-15 85.5 80 56.2
arahy.Tifrunner.gnm1.ann1.HIDG7R Arachis hypogaea HOM05D005765 ORTHO05D002313 3.6e-15 85.1 77 55.8
Cpa.g.sc171.10 Carica papaya HOM05D005765 ORTHO05D002313 4.7e-15 84.7 62 75.8
arahy.Tifrunner.gnm1.ann1.UE98G4 Arachis hypogaea HOM05D001334 ORTHO05D001119 6.1e-15 84.3 85 52.9
arahy.Tifrunner.gnm1.ann1.R96Y40 Arachis hypogaea HOM05D005765 ORTHO05D002313 4.0e-14 81.6 71 60.6
arahy.Tifrunner.gnm1.ann1.PXW40T Arachis hypogaea HOM05D005765 ORTHO05D002313 5.2e-14 81.3 80 55.0
arahy.Tifrunner.gnm1.ann1.FH304Y Arachis hypogaea HOM05D005765 ORTHO05D002313 8.9e-14 80.5 67 62.7
Sc03g0006510 Simmondsia chinensis HOM05D005765 ORTHO05D002313 3.4e-13 78.6 39 84.6
arahy.Tifrunner.gnm1.ann1.BY24CF Arachis hypogaea HOM05D001334 ORTHO05D001119 2.2e-12 75.9 85 52.9
COL.COLO4_13264 Corchorus olitorius HOM05D005765 ORTHO05D002313 2.2e-12 75.9 37 83.8
MD00G1153700 Malus domestica HOM05D005765 ORTHO05D002313 2.2e-12 75.9 62 64.5
CBR_g59428 Chara braunii HOM05D005765 ORTHO05D002313 2.9e-12 75.5 69 55.1
BcaB02g07920 Brassica carinata HOM05D005765 ORTHO05D002313 4.9e-12 74.7 60 66.7
MELO3C008191.2 Cucumis melo HOM05D005765 ORTHO05D002313 4.9e-12 74.7 36 88.9
CiPaw.03G056000 Carya illinoinensis HOM05D005765 ORTHO05D002313 5.4e-11 71.2 76 56.6
Aa31LG1G6890 Aethionema arabicum HOM05D005765 ORTHO05D002313 1.3e-09 66.6 36 69.4
CARHR033260 Cardamine hirsuta HOM05D005765 ORTHO05D002313 1.9e-08 62.8 50 68.0
arahy.Tifrunner.gnm1.ann1.QYC5CC Arachis hypogaea HOM05D000501 ORTHO05D000376 8.0e-07 57.4 37 75.7
Sed0021892 Sechium edule HOM05D001579 ORTHO05D002313 1.8e-06 56.2 43 60.5
Phvul.005G024900 Phaseolus vulgaris HOM05D001579 ORTHO05D002313 4.0e-06 55.1 43 65.1
RcHm_v2.0_Chr7g0222081 Rosa chinensis HOM05D001579 ORTHO05D002313 5.2e-06 54.7 43 62.8
FvH4_4g12570 Fragaria vesca HOM05D001579 ORTHO05D002313 6.8e-06 54.3 43 60.5
FAN07G1965 Fragaria x ananassa HOM05D001579 ORTHO05D002313 6.8e-06 54.3 43 60.5
FAN12G4145 Fragaria x ananassa HOM05D001579 ORTHO05D002313 6.8e-06 54.3 43 60.5
FAN17G0073 Fragaria x ananassa HOM05D001579 ORTHO05D002313 6.8e-06 54.3 43 60.5
FAN22G1333 Fragaria x ananassa HOM05D001579 ORTHO05D002313 6.8e-06 54.3 43 60.5
ClCG02G015720 Citrullus lanatus HOM05D001579 ORTHO05D002313 8.9e-06 53.9 43 60.5
VMungo1080G0643 Vigna mungo HOM05D001579 ORTHO05D002313 8.9e-06 53.9 43 62.8


User provided reference genes

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