Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 5.2e-63 244.2 121 100.0
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 2.1e-24 115.9 113 52.2
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 3.4e-22 108.6 112 48.2
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 2.4e-20 102.4 111 53.2
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 4.6e-19 98.2 111 49.5
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 7.8e-19 97.4 111 45.9
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 4.3e-17 91.7 113 48.7
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 5.6e-17 91.3 115 43.5
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 7.3e-17 90.9 113 46.0
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.2e-16 90.1 115 45.2
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 3.6e-16 88.6 113 42.5
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 6.2e-16 87.8 112 46.4
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 1.1e-15 87.0 111 42.3
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 1.8e-15 86.3 110 46.4
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 5.2e-15 84.7 115 42.6
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 5.2e-15 84.7 118 45.8
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 6.8e-15 84.3 107 43.9
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 1.2e-14 83.6 107 43.9
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 1.5e-14 83.2 114 43.0
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.5e-14 83.2 111 42.3
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 3.4e-14 82.0 114 43.9
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 5.8e-14 81.3 106 45.3
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 7.5e-14 80.9 112 43.8
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 7.5e-14 80.9 118 40.7
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 9.8e-14 80.5 112 40.2
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 1.3e-13 80.1 112 42.0
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 1.7e-13 79.7 112 38.4
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.7e-13 79.7 114 42.1
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 1.7e-13 79.7 112 39.3
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 2.2e-13 79.3 114 37.7
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 2.2e-13 79.3 112 41.1
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.9e-13 79.0 112 39.3
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.9e-13 79.0 112 39.3
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.9e-13 79.0 119 40.3
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 3.7e-13 78.6 111 47.7
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 3.7e-13 78.6 112 38.4
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 3.7e-13 78.6 115 38.3
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 3.7e-13 78.6 114 40.4
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 3.7e-13 78.6 118 38.1
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 4.9e-13 78.2 116 44.0
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 6.4e-13 77.8 108 43.5
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 8.3e-13 77.4 107 43.0
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 8.3e-13 77.4 111 40.5
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 1.1e-12 77.0 118 36.4
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.4e-12 76.6 112 39.3
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 1.4e-12 76.6 110 41.8
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 1.9e-12 76.3 111 40.5
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 2.4e-12 75.9 108 43.5
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 2.4e-12 75.9 112 38.4
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 2.4e-12 75.9 126 35.7
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 2.4e-12 75.9 111 36.0
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 3.2e-12 75.5 113 38.1
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 3.2e-12 75.5 112 39.3
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 3.2e-12 75.5 116 42.2
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 4.1e-12 75.1 112 42.9
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 9.2e-12 73.9 116 41.4
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 9.2e-12 73.9 120 40.8
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 1.2e-11 73.6 113 37.2
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 1.6e-11 73.2 89 44.9
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.1e-11 72.8 116 39.7
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 2.1e-11 72.8 113 39.8
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 2.1e-11 72.8 116 41.4
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 2.7e-11 72.4 124 32.3
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 4.6e-11 71.6 116 37.9
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 1.0e-10 70.5 109 39.4
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.3e-10 70.1 123 35.8
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 1.7e-10 69.7 114 43.0
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 1.7e-10 69.7 129 36.4
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 1.7e-10 69.7 107 37.4
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.7e-10 69.7 115 40.0
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 2.3e-10 69.3 117 41.9
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 3.0e-10 68.9 114 36.0
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 3.0e-10 68.9 107 37.4
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 3.0e-10 68.9 117 39.3
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 5.1e-10 68.2 120 39.2
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 6.6e-10 67.8 112 37.5
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 8.6e-10 67.4 112 37.5
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 1.1e-09 67.0 121 37.2
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 1.1e-09 67.0 121 37.2
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 1.1e-09 67.0 113 36.3
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 1.1e-09 67.0 109 41.3
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 1.9e-09 66.2 116 41.4
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 1.9e-09 66.2 109 39.4
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 1.9e-09 66.2 107 36.4
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 1.9e-09 66.2 112 34.8
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 1.9e-09 66.2 112 34.8
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 4.3e-09 65.1 115 32.2
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 4.3e-09 65.1 103 40.8
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 5.6e-09 64.7 109 38.5
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 9.5e-09 63.9 107 40.2
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 1.6e-08 63.2 116 39.7
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 2.1e-08 62.8 109 41.3
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 1.4e-07 60.1 118 34.7
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 3.4e-06 55.5 68 51.5


User provided reference genes

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