Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 9.4e-201 703.4 367 100.0
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.4e-172 607.8 367 83.7
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.3e-169 598.2 367 82.0
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 8.6e-162 573.9 367 77.9
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 6.2e-152 541.2 368 74.5
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 6.0e-131 471.5 369 64.2
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.2e-117 426.4 369 60.7
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.2e-115 420.6 375 60.0
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 1.8e-114 416.8 371 57.7
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.9e-114 415.6 372 59.4
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 5.1e-114 415.2 369 58.8
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 5.7e-113 411.8 377 58.1
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 7.4e-113 411.4 370 57.8
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.6e-112 410.2 389 56.0
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 2.8e-112 409.5 409 54.5
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 4.8e-112 408.7 371 58.5
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 6.3e-112 408.3 370 57.6
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.2e-110 404.1 370 57.3
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 2.6e-110 402.9 403 53.3
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 4.5e-110 402.1 373 58.2
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.7e-109 400.2 369 58.8
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.7e-109 400.2 445 50.1
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.9e-109 399.4 339 59.0
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 8.5e-109 397.9 368 57.1
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 2.1e-107 393.3 377 54.4
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 2.1e-107 393.3 369 58.0
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.7e-107 392.9 366 55.2
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 4.6e-107 392.1 370 57.8
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 1.0e-106 391.0 370 56.2
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.0e-106 391.0 375 57.1
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.0e-106 391.0 370 57.6
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.3e-106 390.6 371 57.1
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.8e-106 390.2 368 57.6
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 3.0e-106 389.4 309 63.4
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.9e-105 386.7 370 54.6
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 2.2e-104 383.3 364 54.4
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 4.8e-104 382.1 384 55.7
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 1.1e-103 380.9 373 55.2
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 1.4e-103 380.6 376 54.0
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 1.4e-103 380.6 258 70.2
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 4.1e-103 379.0 370 53.2
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 6.9e-103 378.3 379 53.0
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 2.0e-102 376.7 382 53.1
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 2.0e-102 376.7 258 70.5
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 3.4e-102 375.9 369 53.7
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.0e-101 374.4 349 55.9
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 2.9e-101 372.9 373 53.1
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 3.8e-101 372.5 382 53.9
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 6.5e-101 371.7 397 50.9
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 8.5e-101 371.3 382 52.4
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 1.9e-100 370.2 259 67.2
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 5.5e-100 368.6 377 51.7
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 2.1e-99 366.7 260 66.9
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 2.7e-99 366.3 335 56.1
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 5.1e-98 362.1 446 46.0
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.1e-97 360.9 257 66.1
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.5e-97 360.5 259 66.4
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 2.0e-97 360.1 388 50.5
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 3.3e-97 359.4 251 68.5
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 4.4e-97 359.0 258 65.9
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 9.7e-97 357.8 375 51.5
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.7e-96 357.1 259 66.0
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 3.7e-96 355.9 259 64.5
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 3.7e-96 355.9 258 65.9
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 1.4e-95 354.0 388 51.0
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 1.4e-95 354.0 388 51.0
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 1.4e-95 354.0 257 65.8
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 5.3e-95 352.1 251 65.7
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 2.0e-94 350.1 251 66.5
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 3.4e-94 349.4 393 50.6
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 3.4e-94 349.4 356 53.7
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.0e-93 347.8 380 51.6
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 2.9e-93 346.3 370 52.2
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.5e-92 343.2 387 49.6
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 3.9e-90 335.9 377 48.3
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 2.0e-89 333.6 380 49.7
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.6e-89 333.2 385 49.6
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 9.1e-87 324.7 392 46.7
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.2e-85 320.1 367 50.1
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 2.3e-82 310.1 384 45.1
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 4.4e-81 305.8 423 45.2
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 1.7e-80 303.9 253 56.9
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.2e-75 287.7 384 44.0
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 4.7e-75 285.8 318 51.9
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 4.4e-73 279.3 285 53.7
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 6.3e-72 275.4 376 45.5
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.7e-70 270.0 173 72.8
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 1.5e-68 264.2 258 51.2
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 2.5e-68 263.5 339 48.7
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 8.0e-67 258.5 258 53.5
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 1.0e-66 258.1 182 67.0
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 5.7e-65 252.3 258 59.3
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.1e-63 248.1 281 50.9
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 5.9e-62 242.3 289 47.8
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 1.8e-55 220.7 206 52.9
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 3.6e-51 206.5 179 56.4
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.1e-50 204.9 371 36.7
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.4e-50 204.5 256 39.8
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 3.1e-50 203.4 360 39.2
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.3e-48 198.0 152 62.5
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 4.9e-48 196.1 326 38.3
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.3e-45 187.2 129 69.0
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 4.9e-40 169.5 123 66.7
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 6.0e-38 162.5 91 83.5
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.0e-33 147.5 226 41.2
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 1.6e-30 137.9 303 32.3
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 1.9e-28 131.0 120 55.0
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 4.0e-26 123.2 134 45.5
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 2.6e-25 120.6 85 64.7
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 9.9e-25 118.6 88 62.5
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.3e-24 118.2 211 35.5
AUR62008093 Chenopodium quinoa HOM05D006769 ORTHO05D008522 3.9e-21 106.7 157 46.5
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 8.7e-21 105.5 146 44.5
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 6.2e-19 99.4 224 34.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.1e-18 98.6 85 49.4
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 1.3e-08 65.1 57 52.6
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.3e-08 65.1 139 34.5
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 3.2e-07 60.5 50 54.0
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 9.3e-07 58.9 47 55.3


User provided reference genes

Program Settings