Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 5.1e-66 254.2 124 100.0
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 2.1e-35 152.5 96 74.0
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.5e-33 146.4 96 71.9
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 6.5e-29 131.0 96 62.5
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 4.8e-24 114.8 99 54.5
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 8.2e-24 114.0 92 56.5
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 2.4e-23 112.5 96 54.2
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 4.1e-23 111.7 98 54.1
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 4.1e-23 111.7 96 55.2
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 5.3e-23 111.3 93 59.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 5.3e-23 111.3 97 55.7
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 2.0e-22 109.4 96 58.3
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 2.0e-22 109.4 96 55.2
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 2.0e-22 109.4 83 57.8
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 3.5e-22 108.6 96 53.1
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 4.5e-22 108.2 96 55.2
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 7.7e-22 107.5 83 55.4
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.3e-21 106.7 84 59.5
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 1.3e-21 106.7 92 53.3
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 1.3e-21 106.7 96 53.1
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.7e-21 106.3 82 59.8
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 1.7e-21 106.3 87 59.8
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 2.2e-21 105.9 87 60.9
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 2.9e-21 105.5 89 58.4
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 3.8e-21 105.1 78 61.5
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 3.8e-21 105.1 78 61.5
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 5.0e-21 104.8 78 61.5
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 5.0e-21 104.8 78 61.5
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 6.5e-21 104.4 96 55.2
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 6.5e-21 104.4 92 53.3
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.1e-20 103.6 84 56.0
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 1.5e-20 103.2 81 56.8
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 1.9e-20 102.8 84 56.0
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 3.2e-20 102.1 78 59.0
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 3.2e-20 102.1 67 67.2
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 4.2e-20 101.7 86 58.1
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 5.5e-20 101.3 84 54.8
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 7.2e-20 100.9 85 60.0
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 9.4e-20 100.5 94 53.2
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 9.4e-20 100.5 78 60.3
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 1.2e-19 100.1 84 56.0
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 2.7e-19 99.0 84 56.0
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 2.7e-19 99.0 91 53.8
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 3.6e-19 98.6 83 57.8
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 4.7e-19 98.2 78 60.3
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 4.7e-19 98.2 84 52.4
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 4.7e-19 98.2 78 59.0
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 8.0e-19 97.4 122 40.2
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 8.0e-19 97.4 85 56.5
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 8.0e-19 97.4 94 54.3
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 1.0e-18 97.1 89 56.2
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 1.8e-18 96.3 100 49.0
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 1.8e-18 96.3 84 52.4
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 2.3e-18 95.9 98 50.0
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 2.3e-18 95.9 95 51.6
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 2.3e-18 95.9 101 48.5
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 3.0e-18 95.5 67 64.2
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 3.0e-18 95.5 78 59.0
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 3.0e-18 95.5 88 54.5
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 3.0e-18 95.5 76 51.3
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 4.0e-18 95.1 100 50.0
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 4.0e-18 95.1 98 49.0
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 5.2e-18 94.7 84 53.6
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 5.2e-18 94.7 94 51.1
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 6.8e-18 94.4 95 48.4
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 6.8e-18 94.4 89 48.3
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 6.8e-18 94.4 88 51.1
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 6.8e-18 94.4 84 51.2
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 8.8e-18 94.0 91 48.4
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 8.8e-18 94.0 96 47.9
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 8.8e-18 94.0 96 52.1
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.5e-17 93.2 84 53.6
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 1.5e-17 93.2 84 53.6
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.5e-17 93.2 76 60.5
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 2.0e-17 92.8 78 52.6
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 2.0e-17 92.8 84 54.8
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 2.6e-17 92.4 102 47.1
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 3.4e-17 92.0 84 54.8
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 4.4e-17 91.7 84 52.4
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 5.7e-17 91.3 93 45.2
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 7.5e-17 90.9 88 50.0
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 1.3e-16 90.1 85 49.4
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.3e-16 90.1 93 44.1
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.3e-16 90.1 93 44.1
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 2.2e-16 89.4 76 57.9
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 2.2e-16 89.4 105 41.9
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.1e-15 87.0 84 51.2
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.1e-15 87.0 67 55.2
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 5.4e-15 84.7 105 43.8
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 9.1e-15 84.0 78 48.7
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 7.7e-14 80.9 79 44.3
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 3.2e-12 75.5 102 41.2
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.7e-11 71.6 84 47.6
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 1.0e-10 70.5 83 42.2
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 1.8e-10 69.7 84 42.9
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 4.4e-09 65.1 86 38.4
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 5.7e-09 64.7 56 48.2
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 5.7e-09 64.7 62 51.6
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 2.8e-08 62.4 76 43.4
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 7.0e-07 57.8 65 46.2
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 2.0e-06 56.2 90 32.2


User provided reference genes

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