Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 9.5e-251 869.8 461 100.0
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.0e-175 620.5 405 78.5
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.9e-167 592.4 404 74.5
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 1.2e-157 560.5 397 69.8
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 4.4e-139 498.8 402 63.9
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.4e-137 493.0 400 66.8
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 7.3e-126 454.9 406 58.4
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 2.6e-123 446.4 398 58.3
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 9.9e-123 444.5 403 57.6
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.3e-122 444.1 399 57.9
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.1e-121 441.0 396 58.8
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.4e-121 440.7 398 57.5
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 3.2e-121 439.5 397 57.4
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-120 437.2 398 56.3
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.6e-120 435.6 398 56.0
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 1.5e-118 430.6 391 57.5
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-117 427.2 398 55.8
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-117 427.2 398 55.8
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 4.8e-117 425.6 323 63.5
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.2e-115 421.0 394 57.1
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.5e-115 420.6 395 53.9
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 9.9e-115 417.9 400 53.0
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 1.3e-114 417.5 400 55.2
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 3.8e-114 416.0 394 54.8
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 4.9e-114 415.6 398 54.5
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 8.4e-114 414.8 395 52.4
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.4e-113 414.1 389 53.7
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 1.2e-112 411.0 397 53.9
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.8e-111 407.1 382 57.9
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 1.1e-110 404.4 390 52.3
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 9.6e-110 401.4 398 54.5
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 1.3e-109 401.0 397 53.7
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 6.2e-109 398.7 397 52.1
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 8.1e-109 398.3 396 52.3
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 8.1e-109 398.3 397 52.6
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.1e-108 397.9 394 53.0
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 3.1e-108 396.4 400 54.8
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 6.9e-108 395.2 396 52.5
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 3.4e-107 392.9 398 51.0
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 5.8e-107 392.1 381 54.9
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.3e-106 391.0 396 51.3
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 2.9e-106 389.8 398 51.0
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 4.9e-106 389.0 397 52.4
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 6.4e-106 388.7 415 50.6
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 8.4e-106 388.3 397 51.4
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.1e-105 387.9 380 55.3
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.6e-104 384.0 401 50.1
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 2.1e-104 383.6 378 52.6
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 2.1e-104 383.6 394 51.3
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 2.7e-104 383.3 398 52.0
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 3.5e-104 382.9 401 49.9
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 7.9e-104 381.7 413 49.6
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.0e-103 381.3 380 55.3
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 3.0e-103 379.8 378 52.4
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 3.9e-103 379.4 398 51.0
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 6.7e-103 378.6 411 51.1
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.5e-102 377.5 380 53.2
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 4.3e-102 375.9 394 51.0
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 4.3e-102 375.9 394 52.8
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 5.6e-102 375.6 397 51.1
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 9.6e-102 374.8 382 54.5
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 2.1e-101 373.6 395 49.4
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 2.1e-101 373.6 382 53.4
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 3.7e-101 372.9 377 50.9
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 4.8e-101 372.5 397 50.6
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 4.8e-101 372.5 399 50.6
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 8.1e-101 371.7 412 49.8
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 8.1e-101 371.7 397 48.1
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 1.1e-100 371.3 398 51.3
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 2.4e-100 370.2 398 50.0
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 2.4e-100 370.2 397 49.6
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.4e-100 370.2 401 48.6
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 4.0e-100 369.4 399 50.4
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 9.0e-100 368.2 400 50.8
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 2.6e-99 366.7 398 50.0
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 3.4e-99 366.3 398 49.2
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 1.0e-98 364.8 398 52.0
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.0e-98 364.8 412 50.5
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.9e-98 363.2 397 50.9
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 8.4e-98 361.7 412 48.1
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 8.4e-98 361.7 405 48.6
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 2.5e-97 360.1 401 46.4
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 3.2e-97 359.8 390 51.0
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 4.2e-97 359.4 396 49.7
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.3e-95 354.4 377 51.2
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 2.8e-93 346.7 362 54.1
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 3.7e-93 346.3 381 49.9
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 3.7e-93 346.3 395 48.6
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 8.2e-93 345.1 404 48.3
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.2e-91 341.3 381 50.7
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.2e-91 341.3 378 48.4
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.4e-89 334.3 377 50.1
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.0e-87 328.2 428 45.3
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 3.0e-87 326.6 377 46.2
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 7.4e-86 322.0 377 45.9
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 5.3e-84 315.8 405 46.4
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 9.1e-84 315.1 270 57.4
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 2.0e-78 297.4 226 61.1
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 2.0e-75 287.3 345 46.1
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.0e-74 285.0 402 42.8
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 6.1e-72 275.8 327 49.2
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 5.3e-68 262.7 192 62.5
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 5.3e-68 262.7 192 62.5
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.9e-65 254.2 221 53.4
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 2.4e-60 237.3 316 43.7
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 8.3e-53 212.2 401 35.7
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 2.3e-50 204.1 412 35.0
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 2.6e-46 190.7 399 35.3
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 5.4e-44 183.0 121 66.9
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.6e-38 164.1 105 68.6
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.4e-36 158.3 300 32.7
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 1.0e-34 152.1 192 47.9
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 1.9e-33 147.9 470 26.2
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-27 128.6 171 47.4
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 7.5e-22 109.4 174 39.7
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 4.4e-14 83.6 179 31.8
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 3.4e-06 57.4 49 51.0


User provided reference genes

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