Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 5.2e-122 441.0 221 100.0
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 2.0e-81 306.2 205 74.6
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 6.5e-72 274.6 206 69.4
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 8.8e-69 264.2 253 60.5
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.4e-66 256.1 253 59.7
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 7.0e-66 254.6 203 67.0
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 7.0e-66 254.6 203 67.0
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 5.0e-64 248.4 214 61.7
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 8.5e-64 247.7 200 65.5
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.5e-63 246.9 203 66.5
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 1.8e-61 240.0 202 64.9
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 5.2e-61 238.4 200 62.0
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.1e-60 237.3 206 61.7
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 3.3e-60 235.7 198 63.6
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 7.5e-60 234.6 205 61.0
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 1.3e-59 233.8 207 60.9
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 1.7e-59 233.4 221 57.0
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 2.8e-59 232.6 214 59.3
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 4.8e-59 231.9 209 59.8
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 1.1e-58 230.7 199 61.3
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.8e-58 229.9 205 60.0
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.8e-58 229.9 200 59.0
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 3.1e-58 229.2 202 58.9
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 3.1e-58 229.2 202 62.4
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 5.3e-58 228.4 197 58.9
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 7.0e-58 228.0 207 58.9
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 9.1e-58 227.6 200 59.5
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 2.0e-57 226.5 218 55.0
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.7e-57 226.1 209 62.2
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 2.7e-57 226.1 211 57.3
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 3.5e-57 225.7 202 59.9
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 4.5e-57 225.3 197 60.9
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 5.9e-57 224.9 203 59.1
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.0e-56 224.2 201 57.2
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 1.3e-56 223.8 206 59.7
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 1.3e-56 223.8 197 58.4
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 2.2e-56 223.0 201 57.2
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 2.2e-56 223.0 224 53.6
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 5.0e-56 221.9 201 56.7
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.5e-55 220.3 200 59.0
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 1.5e-55 220.3 207 57.5
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.5e-55 220.3 205 60.5
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 2.5e-55 219.5 201 56.2
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 3.2e-55 219.2 226 54.0
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 5.5e-55 218.4 198 56.1
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 7.2e-55 218.0 188 60.6
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 7.2e-55 218.0 202 59.9
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.8e-53 213.4 198 56.6
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 2.3e-53 213.0 199 54.3
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 6.8e-53 211.5 242 50.4
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 1.2e-52 210.7 200 53.5
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 3.4e-52 209.1 210 52.9
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 7.5e-52 208.0 201 54.7
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 9.8e-52 207.6 199 53.3
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 9.8e-52 207.6 215 52.6
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 1.3e-51 207.2 194 58.8
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 3.5e-49 199.1 216 49.5
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 5.9e-49 198.4 199 53.8
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 7.7e-49 198.0 203 51.7
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 2.2e-48 196.4 203 51.7
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 2.2e-48 196.4 180 59.4
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 2.2e-48 196.4 200 50.5
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 2.9e-48 196.1 200 51.5
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 3.8e-48 195.7 203 52.2
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 3.8e-48 195.7 200 54.5
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 8.5e-48 194.5 219 48.9
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.9e-47 193.4 162 59.3
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 2.5e-47 193.0 197 51.3
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 3.2e-47 192.6 199 48.2
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 2.1e-46 189.9 199 47.7
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 2.1e-46 189.9 199 47.7
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 2.1e-46 189.9 199 47.7
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 3.6e-46 189.1 209 49.8
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 4.7e-46 188.7 203 50.7
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 6.1e-46 188.3 201 52.2
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 1.0e-45 187.6 220 45.9
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.4e-45 187.2 198 47.5
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 2.3e-45 186.4 203 47.8
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 7.5e-44 181.4 202 47.5
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 4.9e-43 178.7 194 50.5
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 8.3e-43 177.9 171 53.2
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 1.8e-42 176.8 224 43.8
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.9e-40 169.5 141 60.3
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 2.8e-38 162.9 113 70.8
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 4.0e-37 159.1 269 41.3
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 5.2e-37 158.7 199 49.2
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 4.9e-35 152.1 218 47.2
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 7.0e-34 148.3 210 45.7
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.7e-32 143.7 229 39.7
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 6.6e-32 141.7 222 42.8
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.7e-27 127.1 167 43.7
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 4.9e-27 125.6 202 41.1
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 2.4e-26 123.2 219 32.0
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 1.2e-22 110.9 103 62.1
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 7.5e-20 101.7 163 35.6
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 7.1e-18 95.1 207 31.4
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.6e-17 94.0 140 44.3
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.1e-17 93.6 265 31.7
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 4.7e-14 82.4 55 69.1
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 4.0e-13 79.3 135 37.8
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.7e-11 73.9 81 48.1
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.1e-10 71.2 113 40.7


User provided reference genes

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