Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 3.0e-93 345.1 172 100.0
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 2.0e-68 262.7 173 76.3
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 4.9e-59 231.5 168 66.7
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 9.9e-52 207.2 172 61.6
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 8.4e-51 204.1 172 61.0
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 4.2e-50 201.8 172 59.3
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 1.2e-49 200.3 161 62.1
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 1.8e-48 196.4 163 61.3
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 5.1e-48 194.9 166 59.6
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 2.5e-47 192.6 171 60.2
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 4.3e-47 191.8 166 59.0
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.3e-46 190.3 172 57.6
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 3.7e-46 188.7 174 58.6
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 8.1e-46 187.6 172 60.5
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 1.1e-45 187.2 167 59.3
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 1.1e-45 187.2 163 60.1
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 1.4e-45 186.8 173 57.2
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 4.0e-45 185.3 150 60.7
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 6.9e-45 184.5 174 57.5
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 6.9e-45 184.5 167 57.5
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 9.0e-45 184.1 168 57.7
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 1.2e-44 183.7 172 58.7
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 1.2e-44 183.7 174 57.5
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 1.5e-44 183.3 178 56.2
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 2.6e-44 182.6 177 58.8
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 3.4e-44 182.2 174 54.0
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.3e-43 180.3 136 64.7
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 1.3e-43 180.3 135 64.4
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 1.7e-43 179.9 136 64.7
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 1.7e-43 179.9 168 55.4
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.7e-43 179.9 171 57.9
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 2.9e-43 179.1 166 55.4
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 4.9e-43 178.3 174 55.7
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 8.4e-43 177.6 181 53.0
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.1e-42 177.2 135 63.7
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 2.4e-42 176.0 165 57.0
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 4.2e-42 175.3 170 54.1
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 4.2e-42 175.3 179 55.9
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 5.5e-42 174.9 151 56.3
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 7.1e-42 174.5 150 57.3
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 7.1e-42 174.5 135 63.0
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 1.2e-41 173.7 174 56.3
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 3.5e-41 172.2 113 69.0
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 4.6e-41 171.8 116 67.2
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 7.9e-41 171.0 164 51.8
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.0e-40 170.6 163 55.2
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 3.0e-40 169.1 175 56.6
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 3.0e-40 169.1 145 57.2
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 3.9e-40 168.7 166 54.8
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 5.1e-40 168.3 176 51.7
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 6.7e-40 167.9 106 72.6
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 1.5e-39 166.8 138 60.1
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 1.9e-39 166.4 150 54.0
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.9e-39 166.4 107 70.1
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 3.3e-39 165.6 150 53.3
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 3.3e-39 165.6 151 57.0
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 7.4e-39 164.5 164 52.4
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 7.4e-39 164.5 146 51.4
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 7.4e-39 164.5 179 52.0
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 9.6e-39 164.1 137 58.4
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 9.6e-39 164.1 101 73.3
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 2.1e-38 162.9 110 66.4
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 3.7e-38 162.2 169 49.1
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 3.7e-38 162.2 167 50.9
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 8.2e-38 161.0 169 48.5
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 8.2e-38 161.0 169 49.1
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 1.1e-37 160.6 169 47.9
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 1.8e-37 159.8 144 57.6
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 2.4e-37 159.5 132 57.6
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 2.4e-37 159.5 132 57.6
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 2.4e-37 159.5 144 59.7
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 4.0e-37 158.7 205 47.8
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 5.3e-37 158.3 107 67.3
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 5.3e-37 158.3 170 48.8
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 5.3e-37 158.3 170 48.8
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 5.3e-37 158.3 170 48.8
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 6.9e-37 157.9 107 69.2
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 3.4e-36 155.6 100 73.0
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 4.5e-36 155.2 172 48.8
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 7.6e-36 154.5 106 67.9
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 4.9e-35 151.8 175 49.7
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 8.4e-35 151.0 96 68.8
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 1.1e-34 150.6 203 46.3
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 2.7e-33 146.0 193 42.5
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 6.0e-33 144.8 93 76.3
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.3e-32 143.7 91 76.9
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 3.0e-32 142.5 126 54.8
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 3.0e-32 142.5 146 54.8
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 2.5e-31 139.4 184 47.8
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 2.2e-30 136.3 162 44.4
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 3.7e-30 135.6 94 61.7
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 6.3e-30 134.8 94 61.7
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.4e-29 133.7 106 64.2
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.8e-29 133.3 99 61.6
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 2.4e-29 132.9 148 48.6
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 1.2e-28 130.6 95 56.8
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 3.8e-27 125.6 157 47.1
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 5.5e-26 121.7 106 55.7
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 3.3e-23 112.5 72 66.7
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 2.2e-22 109.8 76 63.2
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 2.9e-19 99.4 75 58.7
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 2.7e-17 92.8 102 52.0
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 7.9e-17 91.3 59 66.1
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 4.5e-12 75.5 106 44.3
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 1.1e-10 70.9 97 46.4
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 2.5e-10 69.7 167 32.9
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 2.1e-09 66.6 84 52.4


User provided reference genes

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