Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 5.6e-115 417.5 201 100.0
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 2.3e-84 315.8 192 79.7
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 2.4e-81 305.8 199 76.4
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 2.5e-70 269.2 196 68.4
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 3.4e-51 205.7 191 55.5
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 5.8e-51 204.9 191 54.5
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 7.5e-51 204.5 204 56.9
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 8.3e-50 201.1 192 54.7
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 1.6e-48 196.8 196 53.6
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 4.6e-48 195.3 191 52.4
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 2.3e-44 183.0 161 55.3
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 4.0e-44 182.2 205 49.3
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 3.4e-43 179.1 161 53.4
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 1.7e-42 176.8 159 53.5
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 3.7e-42 175.6 193 49.2
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.4e-41 173.7 149 53.7
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 4.1e-41 172.2 159 51.6
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.2e-40 170.6 149 53.0
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 3.5e-40 169.1 142 57.7
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 1.0e-39 167.5 154 51.9
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 1.7e-39 166.8 131 58.0
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 3.9e-39 165.6 172 49.4
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 3.9e-39 165.6 179 47.5
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 5.1e-39 165.2 154 51.3
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 6.6e-39 164.9 201 46.8
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 1.1e-38 164.1 135 57.0
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 1.9e-38 163.3 159 50.3
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.5e-38 162.9 159 49.7
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 4.3e-38 162.2 192 47.4
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 4.3e-38 162.2 186 45.7
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 1.2e-37 160.6 181 47.5
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.2e-37 160.6 165 49.7
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 2.8e-37 159.5 155 51.6
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 4.7e-37 158.7 165 49.7
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 6.2e-37 158.3 159 48.4
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.1e-36 157.5 159 48.4
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 1.4e-36 157.1 159 49.1
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 1.8e-36 156.8 159 49.1
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.8e-36 156.8 159 48.4
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 4.0e-36 155.6 142 54.2
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 5.2e-36 155.2 153 50.3
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 1.2e-35 154.1 195 43.6
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 2.6e-35 152.9 187 44.4
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 4.4e-35 152.1 155 49.0
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 5.8e-35 151.8 141 51.8
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 9.9e-35 151.0 138 51.4
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 2.2e-34 149.8 156 49.4
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 2.2e-34 149.8 140 52.9
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 3.7e-34 149.1 156 45.5
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 8.3e-34 147.9 154 47.4
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 1.4e-33 147.1 160 48.1
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 1.9e-33 146.7 164 47.0
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 2.4e-33 146.4 186 44.1
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 3.2e-33 146.0 165 44.8
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 5.4e-33 145.2 164 48.8
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 5.4e-33 145.2 165 46.1
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 7.1e-33 144.8 144 48.6
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 9.2e-33 144.4 159 45.9
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 2.1e-32 143.3 132 51.5
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 2.1e-32 143.3 132 51.5
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 2.1e-32 143.3 132 51.5
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 2.1e-32 143.3 155 46.5
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 2.1e-32 143.3 139 47.5
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 6.0e-32 141.7 132 51.5
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 1.0e-31 141.0 149 47.0
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 1.7e-31 140.2 132 50.8
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 6.6e-31 138.3 146 48.6
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 6.6e-31 138.3 117 56.4
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 8.6e-31 137.9 160 43.1
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 8.6e-31 137.9 112 56.2
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 1.1e-30 137.5 155 46.5
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 3.3e-30 136.0 159 44.7
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 5.6e-30 135.2 199 41.7
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 1.6e-29 133.7 131 48.1
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 4.7e-29 132.1 190 38.9
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 4.7e-29 132.1 190 38.9
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 4.7e-29 132.1 190 38.9
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 6.2e-29 131.7 138 48.6
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 1.1e-28 131.0 104 54.8
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 1.1e-28 131.0 137 46.7
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 1.4e-28 130.6 131 47.3
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 1.4e-28 130.6 107 56.1
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 1.8e-28 130.2 109 53.2
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 4.0e-28 129.0 139 43.2
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 6.8e-28 128.3 132 47.0
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 1.7e-26 123.6 119 47.9
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 1.7e-26 123.6 205 36.6
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 6.4e-26 121.7 137 45.3
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 8.4e-26 121.3 133 44.4
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 8.4e-26 121.3 139 43.2
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 9.2e-25 117.9 192 36.5
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 1.6e-24 117.1 109 50.5
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 1.0e-23 114.4 99 51.5
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 1.3e-23 114.0 104 51.9
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.3e-23 113.2 132 43.9
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 2.3e-23 113.2 143 42.0
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 8.7e-23 111.3 152 39.5
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.5e-22 110.5 188 39.4
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 1.2e-21 107.5 149 40.9
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 2.1e-21 106.7 100 50.0
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 1.7e-18 97.1 84 56.0
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 7.1e-17 91.7 210 31.0
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 2.1e-16 90.1 133 39.1
AUR62025057 Chenopodium quinoa HOM05D000087 ORTHO05D008722 6.0e-16 88.6 67 68.7
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 6.0e-16 88.6 104 44.2
AUR62025055 Chenopodium quinoa HOM05D002989 ORTHO05D008722 2.5e-14 83.2 74 59.5
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 4.5e-11 72.4 77 45.5
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 8.4e-10 68.2 60 46.7
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 9.3e-09 64.7 62 46.8
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 7.9e-08 61.6 87 39.1
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.5e-06 57.4 61 42.6


User provided reference genes

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