Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 5.7e-75 284.3 153 100.0
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 3.7e-58 228.4 133 84.2
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 7.0e-57 224.2 126 85.7
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 4.8e-50 201.4 134 75.4
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 3.8e-47 191.8 130 70.0
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 3.8e-47 191.8 129 70.5
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 3.8e-47 191.8 132 68.9
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 5.0e-47 191.4 132 68.9
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 8.5e-47 190.7 129 69.8
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 2.5e-46 189.1 129 69.0
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 2.7e-45 185.7 146 63.0
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 3.6e-45 185.3 146 61.6
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 2.3e-44 182.6 146 61.0
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 2.3e-44 182.6 122 69.7
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 4.0e-44 181.8 124 70.2
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 4.0e-44 181.8 147 66.0
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 8.8e-44 180.6 125 68.8
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 1.2e-43 180.3 134 64.2
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 1.5e-43 179.9 152 63.8
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 5.7e-43 177.9 129 67.4
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 9.8e-43 177.2 128 66.4
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 1.3e-42 176.8 132 65.2
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 1.3e-42 176.8 106 83.0
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.7e-42 176.4 129 65.9
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 1.7e-42 176.4 124 68.5
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 6.3e-42 174.5 122 66.4
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 6.3e-42 174.5 129 65.9
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 1.4e-41 173.3 122 65.6
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 2.4e-41 172.6 126 62.7
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 2.4e-41 172.6 152 59.2
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 7.0e-41 171.0 147 61.2
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 1.2e-40 170.2 147 61.2
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 1.6e-40 169.9 127 65.4
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 2.7e-40 169.1 149 59.1
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 4.5e-40 168.3 147 59.9
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 4.5e-40 168.3 147 59.9
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 7.7e-40 167.5 158 60.1
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 1.3e-39 166.8 124 67.7
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 2.9e-39 165.6 124 65.3
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 3.8e-39 165.2 121 66.9
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 5.0e-39 164.9 125 62.4
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 5.0e-39 164.9 132 63.6
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 1.1e-38 163.7 130 65.4
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 4.3e-38 161.8 124 64.5
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 5.6e-38 161.4 124 63.7
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 1.2e-37 160.2 128 60.9
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 1.6e-37 159.8 124 62.9
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 4.7e-37 158.3 148 56.1
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 4.7e-37 158.3 119 63.9
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 4.7e-37 158.3 123 60.2
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 6.1e-37 157.9 147 55.8
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 8.0e-37 157.5 147 55.1
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 1.0e-36 157.1 128 57.0
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 1.0e-36 157.1 151 54.3
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 1.0e-36 157.1 149 53.0
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 1.4e-36 156.8 146 56.2
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 1.4e-36 156.8 127 62.2
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 1.4e-36 156.8 123 59.3
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 1.8e-36 156.4 121 62.0
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 1.8e-36 156.4 119 63.9
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 2.3e-36 156.0 146 53.4
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 4.0e-36 155.2 146 55.5
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 4.0e-36 155.2 146 55.5
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 4.0e-36 155.2 128 56.2
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 5.2e-36 154.8 146 55.5
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 5.2e-36 154.8 123 59.3
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 6.8e-36 154.5 128 59.4
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 6.8e-36 154.5 146 52.7
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 6.8e-36 154.5 123 58.5
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 8.9e-36 154.1 130 58.5
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 3.4e-35 152.1 144 54.2
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 3.4e-35 152.1 144 54.2
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 4.4e-35 151.8 131 55.0
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 4.4e-35 151.8 146 53.4
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 4.4e-35 151.8 145 55.9
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 5.7e-35 151.4 146 52.1
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 7.5e-35 151.0 123 56.1
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 7.5e-35 151.0 123 56.1
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 1.7e-34 149.8 133 55.6
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 2.2e-34 149.4 123 56.9
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 4.9e-34 148.3 123 54.5
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 3.2e-33 145.6 130 52.3
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 4.6e-32 141.7 125 55.2
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 1.0e-31 140.6 123 54.5
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 1.0e-31 140.6 124 54.0
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 2.3e-31 139.4 142 52.1
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 2.3e-31 139.4 86 75.6
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 3.9e-31 138.7 93 71.0
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 3.9e-31 138.7 132 55.3
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 3.9e-31 138.7 132 55.3
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 1.9e-30 136.3 115 60.0
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 1.9e-30 136.3 125 53.6
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 5.6e-30 134.8 128 53.1
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 7.3e-30 134.4 122 54.9
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 1.0e-28 130.6 109 55.0
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 1.0e-28 130.6 125 49.6
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 4.0e-28 128.6 125 52.8
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 7.0e-25 117.9 97 62.9
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 5.6e-22 108.2 117 46.2
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.2e-21 107.1 84 63.1
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 4.9e-18 95.1 113 43.4
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 2.1e-16 89.7 77 64.9
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 2.1e-13 79.7 57 70.2
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 6.2e-13 78.2 64 64.1
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 8.1e-13 77.8 57 70.2
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 2.9e-10 69.3 109 36.7
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 3.0e-07 59.3 109 33.0
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 8.6e-07 57.8 104 37.5
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.5e-06 57.0 113 29.2
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 9.6e-06 54.3 120 31.7
Pp3c3_2630 Physcomitrium patens HOM05D021038 ORTHO05D009018 9.6e-06 54.3 111 32.4


User provided reference genes

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