Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.6e-149 532.7 260 100.0
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 3.7e-119 431.8 260 78.1
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 4.6e-117 424.9 260 77.7
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 6.0e-93 344.7 254 68.5
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.2e-88 330.5 221 69.7
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 1.5e-88 330.1 243 66.7
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 1.5e-88 330.1 253 65.2
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 1.7e-87 326.6 256 62.5
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 3.8e-87 325.5 226 67.3
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 6.4e-87 324.7 244 63.1
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 8.4e-87 324.3 259 61.0
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 1.1e-86 323.9 252 62.3
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.1e-86 323.9 247 64.0
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.4e-86 323.6 207 70.5
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 1.9e-86 323.2 222 68.0
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 3.2e-86 322.4 251 63.7
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 3.2e-86 322.4 248 60.5
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 2.1e-85 319.7 211 69.2
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 2.7e-85 319.3 245 62.0
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 3.5e-85 318.9 242 62.8
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 6.0e-85 318.2 245 62.0
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 7.9e-85 317.8 246 61.4
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.3e-84 317.0 200 71.0
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.3e-84 317.0 200 71.0
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 1.3e-84 317.0 232 62.5
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 1.3e-84 317.0 245 63.7
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 1.8e-84 316.6 245 61.2
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 2.3e-84 316.2 246 61.0
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 2.3e-84 316.2 254 61.8
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 3.9e-84 315.5 219 66.2
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 8.7e-84 314.3 227 63.4
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 8.7e-84 314.3 250 60.0
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.1e-83 313.9 254 59.8
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 1.5e-83 313.5 226 64.6
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 1.5e-83 313.5 206 68.4
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 1.9e-83 313.2 202 71.3
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 3.3e-83 312.4 247 61.1
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 4.3e-83 312.0 251 62.2
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.3e-83 312.0 239 65.3
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.3e-83 312.0 251 58.6
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 4.3e-83 312.0 231 63.6
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 5.6e-83 311.6 230 65.7
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 5.6e-83 311.6 227 62.6
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.3e-82 310.5 199 71.4
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 1.3e-82 310.5 224 62.9
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 2.8e-82 309.3 230 65.7
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 6.2e-82 308.1 225 64.9
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 6.2e-82 308.1 200 68.5
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 6.2e-82 308.1 196 72.4
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 8.2e-82 307.8 235 61.7
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 8.2e-82 307.8 256 59.4
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 1.1e-81 307.4 200 69.5
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 1.4e-81 307.0 255 58.4
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 1.8e-81 306.6 218 65.6
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 2.4e-81 306.2 212 64.6
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 2.4e-81 306.2 235 60.9
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 5.3e-81 305.1 252 59.1
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 5.3e-81 305.1 198 68.7
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.5e-80 303.5 244 60.2
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 2.6e-80 302.8 219 64.8
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 3.4e-80 302.4 244 59.8
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 3.4e-80 302.4 229 62.9
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 3.4e-80 302.4 239 63.6
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 5.8e-80 301.6 202 69.8
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 7.6e-80 301.2 209 66.0
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.0e-79 300.8 219 63.0
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 8.4e-79 297.7 253 59.3
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 8.4e-79 297.7 222 61.7
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.1e-78 297.4 214 67.8
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 3.2e-78 295.8 213 67.6
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.2e-77 293.9 268 55.6
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 2.1e-77 293.1 239 58.6
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.7e-77 292.7 246 60.6
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 6.0e-77 291.6 216 63.0
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 7.9e-77 291.2 206 68.4
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 7.9e-77 291.2 268 54.5
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.7e-75 285.0 231 63.2
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 2.8e-74 282.7 265 55.8
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 6.9e-73 278.1 200 65.0
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 3.4e-72 275.8 173 74.0
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.7e-71 273.5 199 67.8
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 2.3e-68 263.1 175 68.0
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 7.4e-67 258.1 210 57.1
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.8e-65 253.4 213 54.0
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 6.9e-65 251.5 210 60.0
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 2.0e-64 250.0 232 53.9
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 2.6e-64 249.6 200 56.5
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 1.0e-63 247.7 194 58.2
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 3.8e-63 245.7 170 65.3
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 6.1e-61 238.4 196 54.1
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.8e-60 236.9 134 79.1
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.0e-60 236.1 194 61.3
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 3.3e-59 232.6 179 65.9
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 7.4e-59 231.5 254 49.6
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 9.7e-59 231.1 186 60.2
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 3.1e-57 226.1 152 70.4
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.7e-55 220.3 168 60.7
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 7.4e-51 204.9 203 48.3
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 2.5e-46 189.9 131 62.6
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 4.0e-44 182.6 109 72.5
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.0e-43 180.3 247 43.3
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 7.0e-41 171.8 104 71.2
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.2e-35 154.5 184 40.8
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 2.0e-35 153.7 95 67.4
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 2.3e-28 130.2 93 62.4
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.0e-28 129.4 80 72.5
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.3e-23 114.4 92 62.0
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 3.4e-19 99.8 55 78.2
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 6.4e-18 95.5 68 61.8
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 8.3e-18 95.1 78 59.0
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 4.1e-17 92.8 59 72.9
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 1.3e-15 87.8 54 72.2
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 5.6e-14 82.4 73 54.8
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 1.7e-10 70.9 54 55.6
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 1.9e-09 67.4 42 66.7
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 1.9e-09 67.4 42 66.7
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 1.9e-09 67.4 42 66.7
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 1.9e-09 67.4 42 66.7
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 3.2e-09 66.6 75 45.3
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 4.1e-09 66.2 41 68.3


User provided reference genes

Program Settings