Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 1.8e-162 575.9 293 100.0
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 7.4e-124 447.6 309 75.7
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 5.0e-112 408.3 300 72.0
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 2.7e-110 402.5 314 69.4
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 1.3e-104 383.6 310 66.5
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 3.0e-93 345.9 250 71.2
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 5.4e-82 308.5 309 56.0
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 1.1e-74 284.3 304 53.9
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 3.0e-72 276.2 317 51.1
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 3.0e-72 276.2 313 49.8
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 3.9e-72 275.8 308 53.6
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 8.6e-72 274.6 298 51.7
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 7.3e-71 271.6 313 50.8
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 8.1e-70 268.1 305 50.2
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 8.1e-70 268.1 315 50.5
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 3.1e-69 266.2 315 49.5
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 3.1e-69 266.2 315 49.5
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 4.0e-69 265.8 321 49.8
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 5.2e-69 265.4 307 49.8
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 6.8e-69 265.0 305 49.8
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 8.9e-69 264.6 315 49.2
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 8.9e-69 264.6 311 51.8
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 1.2e-68 264.2 312 49.7
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 1.5e-68 263.8 317 49.2
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 1.5e-68 263.8 294 53.4
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 1.5e-68 263.8 312 48.1
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 1.5e-68 263.8 322 46.6
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 1.5e-68 263.8 304 51.3
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 2.6e-68 263.1 292 52.1
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 2.6e-68 263.1 298 51.3
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 5.8e-68 261.9 321 47.7
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 1.3e-67 260.8 294 51.0
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 2.9e-67 259.6 312 50.0
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 5.4e-66 255.4 312 47.8
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 1.2e-65 254.2 315 48.6
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 2.1e-65 253.4 318 48.7
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 2.1e-65 253.4 341 45.7
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.1e-63 247.7 380 42.9
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 5.6e-63 245.4 297 47.8
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 1.2e-62 244.2 298 50.3
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.2e-62 244.2 359 44.6
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 1.1e-61 241.1 309 47.6
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 6.8e-61 238.4 391 41.4
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 6.8e-61 238.4 303 44.9
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 1.2e-60 237.7 291 47.4
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 2.6e-60 236.5 325 44.9
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 5.8e-60 235.3 308 47.1
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 2.2e-59 233.4 307 43.6
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 3.8e-59 232.6 272 48.9
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 3.8e-59 232.6 305 44.9
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 1.4e-58 230.7 307 43.0
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 5.4e-58 228.8 287 45.3
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 1.7e-56 223.8 303 47.5
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 2.3e-56 223.4 308 43.5
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 3.0e-56 223.0 300 44.3
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 3.9e-56 222.6 313 46.3
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 8.7e-56 221.5 291 44.3
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 5.6e-55 218.8 292 42.1
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 7.3e-55 218.4 290 44.8
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 2.1e-54 216.9 187 59.4
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 2.8e-54 216.5 284 44.4
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 6.2e-54 215.3 273 48.7
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 3.1e-53 213.0 320 44.1
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 6.9e-53 211.8 265 47.2
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 3.4e-52 209.5 302 43.0
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 4.4e-52 209.1 198 54.5
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 6.4e-51 205.3 166 59.0
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 2.4e-50 203.4 318 40.3
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 1.2e-49 201.1 280 43.6
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 1.2e-49 201.1 326 40.2
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 2.7e-49 199.9 260 45.4
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 4.6e-49 199.1 266 44.4
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 2.1e-46 190.3 333 39.9
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 6.9e-45 185.3 269 45.4
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 1.2e-44 184.5 266 42.5
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 7.6e-44 181.8 294 39.8
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 4.9e-43 179.1 363 36.1
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 8.4e-43 178.3 273 42.9
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 2.3e-40 170.2 292 38.4
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 5.6e-39 165.6 184 51.1
SalBow6G3661 Salvia bowleyana HOM05D007619 ORTHO05D009522 3.7e-38 162.9 288 38.9
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 2.2e-35 153.7 208 44.7
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 1.4e-34 151.0 241 40.7
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 1.5e-31 141.0 293 36.9
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-29 134.0 217 41.0
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 1.8e-29 134.0 116 55.2
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 5.3e-29 132.5 93 66.7
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 2.0e-28 130.6 93 64.5
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 3.8e-27 126.3 78 70.5
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 1.4e-26 124.4 277 35.4
SMO230G0088 Selaginella moellendorffii HOM05D007619 ORTHO05D009522 1.3e-24 117.9 192 41.7
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 7.7e-20 102.1 167 41.9
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 1.2e-17 94.7 190 41.1
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 1.1e-15 88.2 126 40.5
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 2.8e-14 83.6 50 74.0
ATR0609G094 Amborella trichopoda HOM05D007619 ORTHO05D009522 4.5e-12 76.3 147 40.1
Sabra18G0055300 Salix brachista HOM05D007619 ORTHO05D009522 1.0e-11 75.1 170 36.5
SEGI_37386 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 1.9e-10 70.9 105 45.7
FvH4_6g00730 Fragaria vesca HOM05D007619 ORTHO05D009522 2.3e-08 63.9 40 75.0


User provided reference genes

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