Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac4g09938 Beta vulgaris HOM05D024357 ORTHO05D003004 1.2e-94 349.7 168 100.0
EL10Ac8g18895 Beta vulgaris HOM05D024357 ORTHO05D003004 4.6e-94 347.8 168 99.4
EL10Ac8g18894 Beta vulgaris HOM05D024357 ORTHO05D003004 8.7e-93 343.6 168 97.6
EL10Ac3g06698 Beta vulgaris HOM05D024357 ORTHO05D003004 7.6e-89 330.5 168 94.0
EL10Ac7g18007 Beta vulgaris HOM05D000025 ORTHO05D003004 3.1e-82 308.5 166 86.7
EL10Ac5g11580 Beta vulgaris HOM05D024357 ORTHO05D003004 9.3e-63 243.8 140 83.6
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 8.8e-21 104.4 161 35.4
Ah.15g098230 Amaranthus hybridus HOM05D002915 ORTHO05D003004 3.0e-13 79.3 164 31.7
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 1.2e-12 77.4 157 27.4
CSS0048418 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 4.4e-12 75.5 116 31.9
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 5.7e-12 75.1 170 29.4
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 9.8e-12 74.3 160 30.6
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 9.8e-12 74.3 175 30.9
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 3.7e-11 72.4 170 30.0
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 8.3e-11 71.2 170 28.8
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 1.1e-10 70.9 172 27.3
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 1.1e-10 70.9 175 29.1
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 1.8e-10 70.1 117 33.3
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 1.8e-10 70.1 117 33.3
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-10 70.1 173 29.5
AL2G26290 Arabidopsis lyrata HOM05D002915 ORTHO05D003004 2.4e-10 69.7 175 32.6
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 2.4e-10 69.7 117 30.8
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 3.2e-10 69.3 163 28.2
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 3.2e-10 69.3 163 29.4
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 3.2e-10 69.3 163 29.4
Cc05_g03590 Coffea canephora HOM05D002915 ORTHO05D003004 4.1e-10 68.9 153 30.7
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 7.0e-10 68.2 165 29.7
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.0e-09 66.6 164 28.7
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 2.0e-09 66.6 113 30.1
AT1G67623 Arabidopsis thaliana HOM05D002915 ORTHO05D003004 4.6e-09 65.5 168 30.4
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 4.6e-09 65.5 168 26.8
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.6e-09 65.5 169 27.8
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 7.8e-09 64.7 160 26.9
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 7.8e-09 64.7 166 30.1
Medtr3g075360 Medicago truncatula HOM05D002915 ORTHO05D003004 7.8e-09 64.7 118 33.1
SGA_v2.0_scaffold169G38697 Striga asiatica HOM05D002915 ORTHO05D003004 7.8e-09 64.7 156 28.8
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 1.0e-08 64.3 108 31.5
HanXRQChr05g0131161 Helianthus annuus HOM05D002915 ORTHO05D003004 1.0e-08 64.3 161 26.7
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.3e-08 63.9 160 31.9
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 1.3e-08 63.9 120 31.7
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 1.7e-08 63.5 103 33.0
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 2.3e-08 63.2 160 31.9
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 2.3e-08 63.2 171 26.9
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.0e-08 62.8 165 30.3
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 3.0e-08 62.8 166 25.3
Sopen06g010910 Solanum pennellii HOM05D000025 ORTHO05D000136 3.9e-08 62.4 159 27.7
Glyma.07G247800 Glycine max HOM05D002915 ORTHO05D003004 6.6e-08 61.6 103 34.0
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 6.6e-08 61.6 110 31.8
Glyma.17G026300 Glycine max HOM05D002915 ORTHO05D003004 8.6e-08 61.2 110 32.7
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 8.6e-08 61.2 169 26.0
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 8.6e-08 61.2 166 24.1
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 1.1e-07 60.8 155 27.1
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.1e-07 60.8 109 34.9
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 1.5e-07 60.5 108 30.6
Lalb_Chr18g0050831 Lupinus albus HOM05D002915 ORTHO05D003004 1.5e-07 60.5 168 26.2
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.5e-07 60.5 168 28.0
Cc03_g08730 Coffea canephora HOM05D002915 ORTHO05D003004 1.9e-07 60.1 103 33.0
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 1.9e-07 60.1 114 31.6
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 3.3e-07 59.3 157 27.4
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 3.3e-07 59.3 169 25.4
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 3.3e-07 59.3 113 33.6
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 4.3e-07 58.9 108 31.5
Cc00_g09710 Coffea canephora HOM05D002915 ORTHO05D003004 5.6e-07 58.5 96 35.4
Duzib150G0710 Durio zibethinus HOM05D002915 ORTHO05D003004 5.6e-07 58.5 178 28.1
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 7.3e-07 58.2 108 32.4
Thhalv10019642m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 7.3e-07 58.2 122 30.3
Gorai.006G126200 Gossypium raimondii HOM05D002915 ORTHO05D003004 7.3e-07 58.2 162 27.8
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 9.5e-07 57.8 103 31.1
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 9.5e-07 57.8 103 31.1
Medtr5g033770 Medicago truncatula HOM05D002915 ORTHO05D003004 9.5e-07 57.8 174 25.9
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 9.5e-07 57.8 118 30.5
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 1.2e-06 57.4 167 26.9
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 1.2e-06 57.4 167 26.9
Cc00_g21400 Coffea canephora HOM05D002915 ORTHO05D003004 1.6e-06 57.0 72 40.3
SGA_v2.0_scaffold51G18778 Striga asiatica HOM05D002915 ORTHO05D003004 2.1e-06 56.6 122 29.5
Gohir.D09G108500 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.6e-06 55.8 162 27.2
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 3.6e-06 55.8 106 30.2
Thhalv10019573m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 4.7e-06 55.5 120 30.8
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 6.2e-06 55.1 103 33.0
Gohir.D09G108400 Gossypium hirsutum HOM05D002915 ORTHO05D003004 6.2e-06 55.1 165 26.1
Gorai.006G126100 Gossypium raimondii HOM05D002915 ORTHO05D003004 6.2e-06 55.1 165 26.1
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 8.0e-06 54.7 103 30.1
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 8.0e-06 54.7 162 24.1
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 8.0e-06 54.7 164 26.2


User provided reference genes

Program Settings