Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac4g08712 Beta vulgaris HOM05D000050 ORTHO05D039035 5.4e-93 344.4 180 100.0
AUR62018450 Chenopodium quinoa HOM05D000050 ORTHO05D006094 8.0e-36 154.5 150 64.7
AUR62044412 Chenopodium quinoa HOM05D000050 ORTHO05D039035 8.0e-36 154.5 150 64.7
EL10Ac3g07360 Beta vulgaris HOM05D000050 ORTHO05D006094 1.2e-34 150.6 150 62.7
AUR62020984 Chenopodium quinoa HOM05D000050 ORTHO05D006094 2.0e-31 139.8 150 59.3
Ah.04g150110 Amaranthus hybridus HOM05D000050 ORTHO05D006094 6.5e-30 134.8 150 54.7
PGR142G1375 Punica granatum HOM05D000050 ORTHO05D006094 3.6e-20 102.4 152 48.0
CANSAT21G2133 Cannabis sativa HOM05D000050 ORTHO05D006094 2.3e-19 99.8 157 50.3
TWI53G0709 Tripterygium wilfordii HOM05D000050 ORTHO05D006094 2.6e-18 96.3 152 47.4
Manes.02G219500 Manihot esculenta HOM05D000050 ORTHO05D006094 7.5e-18 94.7 152 46.7
Ciclev10012469m.g Citrus clementina HOM05D000050 ORTHO05D006094 2.2e-17 93.2 154 45.5
QL07p015372 Quercus lobata HOM05D000050 ORTHO05D006094 2.2e-17 93.2 152 47.4
CiPaw.09G161800 Carya illinoinensis HOM05D000050 ORTHO05D006094 3.7e-17 92.4 150 46.7
CiPaw.10G122100 Carya illinoinensis HOM05D000050 ORTHO05D006094 1.8e-16 90.1 151 47.0
Potri.006G026900 Populus trichocarpa HOM05D000050 ORTHO05D006094 2.4e-16 89.7 150 44.0
FAN26G1674 Fragaria x ananassa HOM05D000050 ORTHO05D006094 3.2e-16 89.4 156 48.1
Potri.016G024800 Populus trichocarpa HOM05D000050 ORTHO05D006094 3.2e-16 89.4 150 44.7
MD14G1093100 Malus domestica HOM05D000050 ORTHO05D006094 5.4e-16 88.6 154 46.1
Sabra16G0030700 Salix brachista HOM05D000050 ORTHO05D006094 5.4e-16 88.6 150 44.7
Manes.09G074400 Manihot esculenta HOM05D000050 ORTHO05D006094 7.0e-16 88.2 150 44.0
FAN23G0798 Fragaria x ananassa HOM05D000050 ORTHO05D006094 9.2e-16 87.8 156 47.4
Prupe.7G024400 Prunus persica HOM05D000050 ORTHO05D006094 9.2e-16 87.8 154 47.4
FvH4_1g29560 Fragaria vesca HOM05D000050 ORTHO05D006094 1.2e-15 87.4 155 48.4
FAN19G1441 Fragaria x ananassa HOM05D000050 ORTHO05D006094 1.6e-15 87.0 154 46.8
Ca_03424_v3 Cicer arietinum L. HOM05D000050 ORTHO05D006094 3.5e-15 85.9 153 47.7
Glyma.19G072800 Glycine max HOM05D000050 ORTHO05D006094 5.9e-15 85.1 152 46.7
Actinidia37861 Actinidia chinensis HOM05D000050 ORTHO05D006094 7.8e-15 84.7 153 47.1
Gohir.A11G305200 Gossypium hirsutum HOM05D000050 ORTHO05D006094 7.8e-15 84.7 153 41.8
Gorai.007G350800 Gossypium raimondii HOM05D000050 ORTHO05D006094 7.8e-15 84.7 155 41.3
Lj1g0018365 Lotus japonicus HOM05D000050 ORTHO05D006094 7.8e-15 84.7 151 47.0
Sabra06G0019800 Salix brachista HOM05D000050 ORTHO05D006094 1.3e-14 84.0 150 42.0
TPR.G23680 Trifolium pratense HOM05D000050 ORTHO05D006094 1.3e-14 84.0 152 47.4
CSS0002447 Camellia sinensis var. sinensis HOM05D000050 ORTHO05D006094 1.7e-14 83.6 152 43.4
Atru.chr8.916 Acer truncatum HOM05D000050 ORTHO05D006094 2.3e-14 83.2 150 40.7
MD12G1099900 Malus domestica HOM05D000050 ORTHO05D006094 3.0e-14 82.8 153 42.5
Nn7g37175 Nelumbo nucifera HOM05D000050 ORTHO05D006094 3.0e-14 82.8 154 46.1
Dinv02783 Davidia involucrata HOM05D000050 ORTHO05D006094 3.9e-14 82.4 158 41.8
Sc13g0000750 Simmondsia chinensis HOM05D000050 ORTHO05D006094 3.9e-14 82.4 150 42.0
Duzib128G0594 Durio zibethinus HOM05D000050 ORTHO05D006094 5.0e-14 82.0 150 43.3
Oeu044221.1 Olea europaea HOM05D000050 ORTHO05D006094 5.0e-14 82.0 152 48.7
TWI74G0450 Tripterygium wilfordii HOM05D000050 ORTHO05D006094 5.0e-14 82.0 155 43.2
Haze_20344 Corylus avellana HOM05D000050 ORTHO05D006094 8.6e-14 81.3 129 47.3
Gohir.D11G320600 Gossypium hirsutum HOM05D000050 ORTHO05D006094 8.6e-14 81.3 151 42.4
Nitab4.5_0000062g0370 Nicotiana tabacum HOM05D000050 ORTHO05D006094 1.5e-13 80.5 132 47.0
Thecc.05G130500 Theobroma cacao HOM05D000050 ORTHO05D006094 1.5e-13 80.5 150 41.3
CAN.G128.107 Capsicum annuum HOM05D000050 ORTHO05D006094 1.9e-13 80.1 131 48.1
Nitab4.5_0005702g0010 Nicotiana tabacum HOM05D000050 ORTHO05D006094 2.5e-13 79.7 130 46.2
Peaxi162Scf00153g01027 Petunia axillaris HOM05D000050 ORTHO05D006094 2.5e-13 79.7 151 42.4
Psat0s3111g0040 Pisum sativum HOM05D000050 ORTHO05D006094 5.6e-13 78.6 162 43.8
Lalb_Chr22g0358131 Lupinus albus HOM05D000050 ORTHO05D006094 7.3e-13 78.2 132 50.0
ECA246G3238 Erigeron canadensis HOM05D000050 ORTHO05D006094 9.5e-13 77.8 131 48.9
Solyc10g081160.2 Solanum lycopersicum HOM05D000050 ORTHO05D006094 1.2e-12 77.4 130 44.6
Sed0004724 Sechium edule HOM05D000050 ORTHO05D006094 3.6e-12 75.9 150 44.0
PGSC0003DMG400028110 Solanum tuberosum HOM05D000050 ORTHO05D006094 4.7e-12 75.5 130 43.8
Eucgr.K01701 Eucalyptus grandis HOM05D000050 ORTHO05D006094 6.2e-12 75.1 152 44.7
Sopen10g031660 Solanum pennellii HOM05D000050 ORTHO05D006094 6.2e-12 75.1 130 43.8
Lalb_Chr14g0365241 Lupinus albus HOM05D000050 ORTHO05D006094 1.1e-11 74.3 131 43.5
DCAR_013516 Daucus carota HOM05D000050 ORTHO05D006094 1.8e-11 73.6 156 41.0
MSTRG.6282 Avicennia marina HOM05D000050 ORTHO05D006094 2.3e-11 73.2 152 42.1
Medtr7g087590 Medicago truncatula HOM05D000050 ORTHO05D006094 2.3e-11 73.2 151 43.7
Sed0007736 Sechium edule HOM05D000050 ORTHO05D006094 5.2e-11 72.0 129 48.8
MSTRG.19762 Avicennia marina HOM05D000050 ORTHO05D006094 6.8e-11 71.6 154 45.5
COL.COLO4_22768 Corchorus olitorius HOM05D000050 ORTHO05D006094 6.8e-11 71.6 152 40.8
Duzib093G1108 Durio zibethinus HOM05D000050 ORTHO05D006094 6.8e-11 71.6 153 40.5
ClCG04G004980 Citrullus lanatus HOM05D000050 ORTHO05D006094 8.9e-11 71.2 150 42.0
HanXRQChr14g0448081 Helianthus annuus HOM05D000050 ORTHO05D006094 8.9e-11 71.2 132 47.7
RcHm_v2.0_Chr3g0495201 Rosa chinensis HOM05D000050 ORTHO05D006094 2.0e-10 70.1 159 41.5
AL6G14860 Arabidopsis lyrata HOM05D000050 ORTHO05D006094 2.6e-10 69.7 150 39.3
GSVIVG01025833001 Vitis vinifera HOM05D000050 ORTHO05D006094 2.6e-10 69.7 151 40.4
MELO3C026341.2 Cucumis melo HOM05D000050 ORTHO05D006094 3.4e-10 69.3 152 43.4
HanXRQChr07g0200131 Helianthus annuus HOM05D000050 ORTHO05D006094 3.4e-10 69.3 154 42.9
Os06g0660700 Oryza sativa ssp. japonica HOM05D000050 ORTHO05D006094 3.4e-10 69.3 155 43.2
Lalb_Chr24g0400711 Lupinus albus HOM05D000050 ORTHO05D006094 4.4e-10 68.9 129 44.2
ECA238G2534 Erigeron canadensis HOM05D000050 ORTHO05D006094 9.8e-10 67.8 152 40.8
Oeu009509.1 Olea europaea HOM05D000050 ORTHO05D006094 9.8e-10 67.8 152 38.8
AT5G05080 Arabidopsis thaliana HOM05D000050 ORTHO05D006094 1.3e-09 67.4 150 38.7
A10p31070 Brassica napus HOM05D000050 ORTHO05D006094 1.3e-09 67.4 151 39.7
C09p71640 Brassica napus HOM05D000050 ORTHO05D006094 1.3e-09 67.4 151 39.7
BolC9t59922H Brassica oleracea HOM05D000050 ORTHO05D006094 1.3e-09 67.4 151 39.7
VMungo1383G0912 Vigna mungo HOM05D000050 ORTHO05D006094 1.3e-09 67.4 150 44.0
CARHR208190 Cardamine hirsuta HOM05D000050 ORTHO05D006094 1.7e-09 67.0 151 37.7
Sp6g37750 Schrenkiella parvula HOM05D000050 ORTHO05D006094 1.7e-09 67.0 150 37.3
C09p71600 Brassica napus HOM05D000050 ORTHO05D006094 3.7e-09 65.9 151 39.1
Lj2A416G30 Lonicera japonica HOM05D000050 ORTHO05D006094 3.7e-09 65.9 156 36.5
PSO384G4718 Papaver somniferum HOM05D000050 ORTHO05D006094 3.7e-09 65.9 156 38.5
THA.LOC104826883 Tarenaya hassleriana HOM05D000050 ORTHO05D006094 3.7e-09 65.9 129 41.1
TAR633G2380 Trochodendron aralioides HOM05D000050 ORTHO05D006094 3.7e-09 65.9 153 41.8
arahy.Tifrunner.gnm1.ann1.Z6KCP2 Arachis hypogaea HOM05D000050 ORTHO05D006094 6.4e-09 65.1 151 39.1
PSO339G5524 Papaver somniferum HOM05D000050 ORTHO05D006094 6.4e-09 65.1 152 38.8
Aqoxy1G00103 Aquilegia oxysepala HOM05D000050 ORTHO05D006094 8.3e-09 64.7 153 40.5
arahy.Tifrunner.gnm1.ann1.Z0C2B4 Arachis hypogaea HOM05D000050 ORTHO05D006094 8.3e-09 64.7 150 40.0
BcaC06g32219 Brassica carinata HOM05D000050 ORTHO05D006094 8.3e-09 64.7 151 38.4
SGA_v2.0_scaffold66G22321 Striga asiatica HOM05D000050 ORTHO05D006094 1.1e-08 64.3 151 41.1
Phvul.001G102600 Phaseolus vulgaris HOM05D000050 ORTHO05D006094 1.9e-08 63.5 150 42.0
vmacro07592 Vaccinium macrocarpon HOM05D000050 ORTHO05D006094 1.9e-08 63.5 154 40.3
CsaV3_4G027690 Cucumis sativus L. HOM05D000050 ORTHO05D006094 2.4e-08 63.2 151 43.0
Lsat_1_v5_gn_2_86281 Lactuca sativa HOM05D000050 ORTHO05D006094 3.2e-08 62.8 154 39.6
SalBow6G5391 Salvia bowleyana HOM05D000050 ORTHO05D006094 3.2e-08 62.8 151 39.7
SalBow6G5819 Salvia bowleyana HOM05D000050 ORTHO05D006094 3.2e-08 62.8 151 39.7
C03p02430 Brassica napus HOM05D000050 ORTHO05D006094 4.1e-08 62.4 150 38.0
Aa31LG11G5900 Aethionema arabicum HOM05D000050 ORTHO05D006094 5.4e-08 62.0 150 37.3
Cpa.g.sc92.55 Carica papaya HOM05D000050 ORTHO05D006094 7.0e-08 61.6 150 38.0
Thhalv10014464m.g Eutrema salsugineum HOM05D000050 ORTHO05D006094 9.2e-08 61.2 150 37.3
Cc06_g22700 Coffea canephora HOM05D000050 ORTHO05D006094 1.2e-07 60.8 155 40.6
Lj2A416T35 Lonicera japonica HOM05D000050 ORTHO05D006094 1.2e-07 60.8 155 38.1
CDE08G1544 Ceratophyllum demersum HOM05D000050 ORTHO05D006094 3.5e-07 59.3 156 35.3
Zm00001eb274710 Zea mays HOM05D000050 ORTHO05D006094 4.6e-07 58.9 154 39.0
MBI19_g10815_MAGBIO Magnolia biondii HOM05D000050 ORTHO05D006094 7.8e-07 58.2 152 40.1
unitig_37.g12771 Utricularia gibba HOM05D000050 ORTHO05D006094 7.8e-07 58.2 132 41.7
HPP92_010290 Vanilla planifolia HOM05D000050 ORTHO05D006094 7.8e-07 58.2 155 37.4
Carub.0006s0401 Capsella rubella HOM05D000050 ORTHO05D006094 2.3e-06 56.6 150 36.0
unitig_46.g18483 Utricularia gibba HOM05D000050 ORTHO05D006094 5.0e-06 55.5 130 39.2


User provided reference genes

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