Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 2.1e-126 455.7 228 100.0
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 4.5e-68 261.9 226 62.8
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 1.9e-58 229.9 224 59.4
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 2.9e-51 206.1 236 52.1
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 1.4e-48 197.2 249 51.4
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 4.7e-33 145.6 244 39.8
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 1.0e-32 144.4 237 39.7
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 5.2e-32 142.1 240 40.0
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 2.0e-31 140.2 243 40.3
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 8.3e-30 134.8 266 38.7
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 1.2e-28 131.0 240 35.8
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 4.6e-28 129.0 238 36.1
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 1.0e-27 127.9 250 38.4
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 2.9e-27 126.3 233 37.3
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 8.6e-27 124.8 247 37.7
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 7.3e-26 121.7 234 37.2
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 3.6e-25 119.4 233 39.5
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 3.6e-25 119.4 245 38.8
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 4.7e-25 119.0 256 36.3
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 6.1e-25 118.6 236 34.3
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 1.8e-24 117.1 247 37.7
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 2.3e-24 116.7 246 39.0
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 1.2e-23 114.4 227 39.2
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 1.2e-23 114.4 248 35.9
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 2.6e-23 113.2 236 36.4
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 2.6e-23 113.2 239 35.1
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 2.6e-23 113.2 232 38.8
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 3.4e-23 112.8 248 32.7
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 4.4e-23 112.5 80 62.5
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 7.5e-23 111.7 237 34.6
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 1.7e-22 110.5 223 33.6
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 1.7e-22 110.5 244 35.7
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 2.2e-22 110.2 236 37.3
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 2.9e-22 109.8 240 37.1
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 2.9e-22 109.8 251 33.1
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 4.9e-22 109.0 230 34.8
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 8.3e-22 108.2 241 33.6
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 1.9e-21 107.1 226 36.7
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 1.9e-21 107.1 236 36.9
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 3.2e-21 106.3 243 35.0
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 3.2e-21 106.3 245 35.9
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 1.6e-20 104.0 232 36.2
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 1.6e-20 104.0 286 31.5
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 2.0e-20 103.6 205 35.1
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 2.0e-20 103.6 247 34.4
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 2.7e-20 103.2 244 35.7
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 3.5e-20 102.8 244 34.4
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 6.0e-20 102.1 252 33.7
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 6.0e-20 102.1 292 30.5
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 1.3e-19 100.9 237 34.6
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.7e-19 100.5 80 53.8
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 3.9e-19 99.4 264 31.4
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 1.5e-18 97.4 246 33.3
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 1.9e-18 97.1 279 30.8
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 8.1e-17 91.7 237 31.2
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 1.8e-16 90.5 82 53.7
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 2.3e-16 90.1 77 53.2
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 3.1e-16 89.7 246 32.9
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 4.0e-16 89.4 85 49.4
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 5.2e-16 89.0 80 47.5
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 8.9e-16 88.2 77 51.9
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 1.2e-15 87.8 240 32.1
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 1.5e-15 87.4 228 36.0
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 2.0e-15 87.0 237 31.2
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 5.8e-15 85.5 85 50.6
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 5.8e-15 85.5 216 35.2
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 5.8e-15 85.5 232 31.5
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 7.5e-15 85.1 116 41.4
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 1.3e-14 84.3 83 50.6
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 2.2e-14 83.6 237 31.2
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 2.2e-14 83.6 89 46.1
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 2.9e-14 83.2 83 49.4
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 2.9e-14 83.2 245 31.8
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 2.9e-14 83.2 79 49.4
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 3.7e-14 82.8 83 49.4
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 3.7e-14 82.8 83 51.8
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 6.4e-14 82.0 101 42.6
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 2.4e-13 80.1 85 45.9
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 3.2e-13 79.7 85 47.1
AUR62036934 Chenopodium quinoa HOM05D002603 ORTHO05D024969 3.2e-13 79.7 71 60.6
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 3.2e-13 79.7 87 44.8
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 1.2e-12 77.8 273 30.4
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 2.7e-12 76.6 87 46.0
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 3.5e-12 76.3 259 32.8
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 3.5e-12 76.3 82 45.1
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 6.0e-12 75.5 267 28.8
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 7.8e-12 75.1 247 30.4
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 1.0e-11 74.7 86 39.5
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 2.3e-11 73.6 85 47.1
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 2.3e-11 73.6 250 29.2
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 3.0e-11 73.2 85 45.9
AUR62031388 Chenopodium quinoa HOM05D007349 ORTHO05D009317 3.9e-11 72.8 151 37.1
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 5.1e-11 72.4 211 29.4
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 8.6e-11 71.6 282 27.0
Pp3c2_23160 Physcomitrium patens HOM05D007349 ORTHO05D009317 1.6e-09 67.4 78 43.6
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 4.7e-09 65.9 118 36.4
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 2.3e-08 63.5 40 65.0


User provided reference genes

Program Settings