Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 4.5e-155 551.2 276 100.0
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.2e-104 383.6 277 73.3
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.4e-100 370.2 275 71.6
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 9.2e-92 340.9 275 67.6
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 2.0e-78 296.6 275 55.3
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 8.4e-77 291.2 280 55.0
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.2e-75 287.3 281 55.2
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.6e-75 287.0 276 54.0
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 7.8e-75 284.6 225 62.2
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 1.0e-74 284.3 275 54.9
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 3.0e-74 282.7 276 55.1
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 1.9e-73 280.0 273 54.2
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 2.5e-73 279.6 279 53.4
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 2.5e-73 279.6 208 63.9
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 1.3e-72 277.3 281 54.1
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.3e-72 277.3 272 54.4
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 1.6e-72 276.9 270 54.1
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 2.8e-72 276.2 218 64.2
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 3.6e-72 275.8 278 51.8
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 4.8e-72 275.4 190 70.0
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 8.1e-72 274.6 235 56.2
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 2.4e-71 273.1 277 53.1
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 5.3e-71 271.9 274 54.0
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 6.9e-71 271.6 282 52.1
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 4.5e-70 268.9 275 52.0
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 4.5e-70 268.9 242 53.3
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 7.6e-70 268.1 281 50.9
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 9.9e-70 267.7 232 58.2
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 1.3e-69 267.3 268 52.6
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 2.2e-69 266.5 209 60.3
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 6.4e-69 265.0 274 48.9
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 1.1e-68 264.2 223 58.3
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.4e-68 263.8 211 61.1
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.9e-68 263.5 204 61.3
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 2.4e-68 263.1 217 57.1
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 4.2e-68 262.3 224 58.0
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 9.3e-68 261.2 278 52.5
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 1.6e-67 260.4 273 51.6
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.1e-67 260.0 221 54.3
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 2.7e-67 259.6 273 51.6
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 3.5e-67 259.2 218 58.7
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 3.5e-67 259.2 221 55.2
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 6.0e-67 258.5 221 54.3
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 7.9e-67 258.1 269 50.9
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 7.9e-67 258.1 208 60.6
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.3e-66 257.3 274 50.0
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 2.3e-66 256.5 224 55.4
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 2.3e-66 256.5 210 58.1
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.3e-66 256.5 275 50.9
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 3.0e-66 256.1 271 49.8
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 3.0e-66 256.1 247 49.8
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 3.0e-66 256.1 275 50.9
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 8.7e-66 254.6 213 60.1
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 1.5e-65 253.8 211 55.9
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.9e-65 253.4 275 50.5
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 4.3e-65 252.3 222 57.2
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 9.6e-65 251.1 216 57.9
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 4.8e-64 248.8 225 55.1
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.8e-64 248.8 225 55.1
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 4.8e-64 248.8 265 50.6
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 1.1e-63 247.7 267 48.7
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 1.4e-63 247.3 265 49.4
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 1.4e-63 247.3 277 49.5
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.4e-63 247.3 271 49.8
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.4e-63 247.3 200 59.5
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 1.8e-63 246.9 288 47.9
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 2.4e-63 246.5 277 48.4
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 3.1e-63 246.1 228 56.6
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.2e-62 244.2 272 49.3
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.2e-62 244.2 272 49.3
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.2e-62 244.2 272 49.3
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.2e-62 244.2 230 53.9
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.2e-62 244.2 225 52.4
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.5e-62 243.8 211 56.4
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.4e-62 242.7 213 55.9
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 7.6e-62 241.5 224 56.2
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.1e-60 237.7 210 56.2
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 5.5e-60 235.3 210 55.7
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 7.1e-60 235.0 201 58.2
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 4.6e-59 232.3 201 58.2
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 7.9e-59 231.5 209 52.2
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 1.0e-58 231.1 200 58.0
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 1.3e-58 230.7 201 57.7
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 1.8e-55 220.3 198 57.1
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 3.1e-55 219.5 227 49.3
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 2.0e-54 216.9 194 53.6
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 1.0e-53 214.5 211 55.9
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.7e-53 213.8 223 50.2
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 2.9e-53 213.0 239 46.9
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 1.1e-52 211.1 281 42.7
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 2.5e-52 209.9 274 46.7
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 9.3e-52 208.0 191 53.9
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 9.3e-52 208.0 214 46.3
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 1.2e-51 207.6 223 47.1
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 1.8e-50 203.8 283 44.5
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 6.7e-50 201.8 194 52.6
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 3.3e-49 199.5 206 52.4
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.4e-46 189.5 216 44.4
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.4e-46 189.5 216 44.4
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.7e-43 179.9 161 57.1
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.3e-42 176.8 201 49.3
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 8.8e-42 174.9 184 47.8
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.3e-40 171.0 150 55.3
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 2.0e-33 147.1 230 36.5
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 8.2e-32 141.7 190 40.5
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.1e-31 139.8 132 52.3
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.9e-20 104.0 189 37.0
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 9.4e-20 101.7 212 31.1
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 2.6e-17 93.6 188 32.4
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.7e-16 90.9 75 56.0
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.2e-16 90.5 129 38.8
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 2.8e-16 90.1 150 36.7
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 7.7e-14 82.0 65 53.8
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.7e-13 80.9 63 58.7
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 8.8e-10 68.6 68 52.9
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 5.7e-09 65.9 68 51.5
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 9.1e-07 58.5 42 57.1


User provided reference genes

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