Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 3.3e-150 535.4 358 100.0
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 5.2e-103 378.6 351 74.4
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 6.8e-103 378.3 349 57.9
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 5.7e-102 375.2 344 69.2
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 9.8e-102 374.4 343 79.0
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 1.7e-101 373.6 341 77.4
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 4.8e-101 372.1 341 77.4
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 8.3e-101 371.3 351 67.5
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 7.0e-100 368.2 348 76.1
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.2e-99 367.5 341 76.8
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 5.9e-99 365.2 341 76.0
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 3.8e-98 362.5 353 76.2
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 6.5e-98 361.7 330 79.7
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 8.6e-98 361.3 341 63.3
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 3.3e-97 359.4 353 66.0
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 1.2e-96 357.5 341 64.8
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 1.4e-95 354.0 351 73.8
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.8e-95 353.6 347 75.5
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 5.2e-95 352.1 358 73.5
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 6.8e-95 351.7 348 73.9
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 1.5e-94 350.5 351 73.2
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 2.0e-94 350.1 349 74.5
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 7.5e-94 348.2 343 75.2
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 2.2e-93 346.7 358 65.6
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 8.3e-93 344.7 358 71.8
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 4.1e-92 342.4 358 65.4
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 5.9e-91 338.6 344 65.7
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 1.3e-90 337.4 348 73.9
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 1.3e-90 337.4 382 61.5
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 1.7e-90 337.0 326 78.5
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 1.7e-90 337.0 359 62.4
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.8e-87 327.0 341 72.1
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 3.0e-87 326.2 286 86.0
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 8.9e-87 324.7 378 68.5
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 1.5e-86 323.9 343 73.2
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 1.5e-86 323.9 329 54.7
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 4.4e-86 322.4 353 70.3
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 5.8e-86 322.0 358 62.8
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.3e-85 320.9 321 69.5
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 3.7e-85 319.3 353 70.3
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 7.0e-84 315.1 341 70.1
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 1.2e-83 314.3 359 69.1
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 6.0e-83 312.0 372 66.9
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 1.0e-82 311.2 341 70.4
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 1.3e-82 310.8 349 72.8
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 3.9e-82 309.3 341 69.8
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 7.3e-81 305.1 358 68.2
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 1.2e-80 304.3 358 67.6
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 2.1e-80 303.5 358 60.1
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 4.7e-80 302.4 358 65.9
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 1.8e-79 300.4 341 70.4
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 5.2e-79 298.9 361 66.5
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 6.8e-79 298.5 341 66.3
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 8.9e-79 298.1 358 57.3
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 2.0e-78 297.0 358 56.7
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 2.6e-78 296.6 351 68.4
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 1.3e-77 294.3 381 46.5
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 1.3e-77 294.3 381 46.5
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 2.2e-77 293.5 341 61.3
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 2.9e-77 293.1 358 66.2
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 5.4e-76 288.9 341 68.3
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 9.2e-76 288.1 354 66.1
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 6.0e-75 285.4 368 45.9
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 1.7e-74 283.9 358 64.2
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 3.0e-74 283.1 341 67.4
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 1.1e-73 281.2 345 67.8
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 1.1e-73 281.2 343 66.5
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 2.5e-73 280.0 349 62.8
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 1.1e-71 274.6 349 69.1
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 1.4e-71 274.2 353 66.0
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 6.8e-71 271.9 351 66.1
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 1.5e-70 270.8 347 64.6
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 6.4e-69 265.4 332 47.9
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 4.1e-68 262.7 291 73.5
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 5.4e-68 262.3 277 67.5
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 9.2e-68 261.5 277 64.6
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 1.3e-66 257.7 319 56.7
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 4.3e-65 252.7 332 57.5
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 6.2e-64 248.8 353 42.2
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 1.1e-63 248.1 345 64.1
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 1.1e-63 248.1 345 64.1
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 1.4e-63 247.7 285 70.2
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 2.4e-63 246.9 342 64.3
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 3.1e-63 246.5 341 62.8
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 6.8e-63 245.4 356 49.2
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 3.0e-58 229.9 296 68.2
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 4.3e-57 226.1 290 72.1
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 4.3e-57 226.1 401 41.6
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 5.6e-57 225.7 278 61.9
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 1.6e-56 224.2 282 70.2
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 1.1e-55 221.5 285 60.0
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 3.1e-55 219.9 340 56.2
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 7.1e-52 208.8 277 69.0
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 8.7e-50 201.8 350 52.6
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 3.3e-49 199.9 277 67.9
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.2e-46 191.4 424 32.8
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 2.0e-46 190.7 124 73.4
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 3.4e-46 189.9 133 68.4
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 4.2e-44 183.0 394 53.0
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 5.4e-44 182.6 150 60.0
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 6.0e-43 179.1 347 53.6
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 6.0e-43 179.1 298 60.7
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 1.3e-42 177.9 302 61.3
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 6.4e-37 159.1 252 65.9
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 8.2e-32 142.1 129 58.9
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 1.4e-31 141.4 293 38.9
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 4.0e-31 139.8 287 39.0
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.6e-30 137.1 111 63.1
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 3.2e-28 130.2 137 55.5
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 3.2e-28 130.2 137 55.5
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 3.0e-26 123.6 131 48.9
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 9.7e-25 118.6 83 68.7
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 3.0e-18 97.1 271 28.4


User provided reference genes

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