Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06737 Beta vulgaris HOM05D001151 ORTHO05D006836 1.4e-70 269.6 149 100.0
EL10Ac4g08352 Beta vulgaris HOM05D001151 ORTHO05D006836 2.3e-57 225.7 130 98.5
EL10Ac4g08227 Beta vulgaris HOM05D001151 ORTHO05D006836 1.9e-51 206.1 130 91.5
AUR62030119 Chenopodium quinoa HOM05D001151 ORTHO05D006836 3.9e-36 155.2 131 68.7
AUR62030120 Chenopodium quinoa HOM05D001151 ORTHO05D006836 3.9e-36 155.2 131 68.7
AUR62042518 Chenopodium quinoa HOM05D001151 ORTHO05D006836 6.2e-34 147.9 128 68.0
Hund21556 Selenicereus undatus HOM05D001151 ORTHO05D006836 2.5e-27 125.9 132 57.6
Rhsim02G0167800 Rhododendron simsii HOM05D001151 ORTHO05D006836 7.6e-24 114.4 140 50.7
vmacro10996 Vaccinium macrocarpon HOM05D001151 ORTHO05D006836 2.9e-23 112.5 135 51.9
Dinv11973 Davidia involucrata HOM05D001151 ORTHO05D006836 1.1e-22 110.5 136 53.7
Thecc.06G005200 Theobroma cacao HOM05D001151 ORTHO05D006836 2.4e-22 109.4 133 50.4
RcHm_v2.0_Chr5g0018351 Rosa chinensis HOM05D001151 ORTHO05D006836 4.2e-22 108.6 138 50.7
Cfa000752 Carpinus fangiana HOM05D001151 ORTHO05D006836 5.4e-22 108.2 135 51.1
Nitab4.5_0006863g0010 Nicotiana tabacum HOM05D001151 ORTHO05D006836 2.1e-21 106.3 147 48.3
Potri.001G442300 Populus trichocarpa HOM05D001151 ORTHO05D006836 3.5e-21 105.5 135 48.1
Sc05g0002950 Simmondsia chinensis HOM05D001151 ORTHO05D006836 7.8e-21 104.4 138 48.6
DCAR_007799 Daucus carota HOM05D001151 ORTHO05D006836 1.0e-20 104.0 137 48.2
FvH4_3g11410 Fragaria vesca HOM05D001151 ORTHO05D006836 1.3e-20 103.6 112 55.4
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.3e-20 103.6 112 55.4
FAN25G0432 Fragaria x ananassa HOM05D001151 ORTHO05D006836 1.3e-20 103.6 112 55.4
Nitab4.5_0002719g0040 Nicotiana tabacum HOM05D001151 ORTHO05D006836 1.3e-20 103.6 109 57.8
Sabra16G0298900 Salix brachista HOM05D001151 ORTHO05D006836 1.7e-20 103.2 135 47.4
Sabra16G0300800 Salix brachista HOM05D001151 ORTHO05D006836 1.7e-20 103.2 135 47.4
CiPaw.09G149300 Carya illinoinensis HOM05D001151 ORTHO05D006836 2.3e-20 102.8 135 48.9
CSS0028548 Camellia sinensis var. sinensis HOM05D001151 ORTHO05D006836 3.9e-20 102.1 109 57.8
Prupe.4G101900 Prunus persica HOM05D001151 ORTHO05D006836 6.6e-20 101.3 111 54.1
Sc05g0003220 Simmondsia chinensis HOM05D001151 ORTHO05D006836 6.6e-20 101.3 136 50.0
Eucgr.A00513 Eucalyptus grandis HOM05D001151 ORTHO05D006836 8.7e-20 100.9 111 55.0
ECA248G2052 Erigeron canadensis HOM05D001151 ORTHO05D006836 1.1e-19 100.5 113 57.5
Lsat_1_v5_gn_1_111521 Lactuca sativa HOM05D001151 ORTHO05D006836 1.5e-19 100.1 127 52.8
Manes.03G069600 Manihot esculenta HOM05D001151 ORTHO05D006836 1.5e-19 100.1 135 49.6
Lj2A338T75 Lonicera japonica HOM05D001151 ORTHO05D006836 1.9e-19 99.8 134 47.0
Peaxi162Scf00670g00341 Petunia axillaris HOM05D001151 ORTHO05D006836 1.9e-19 99.8 110 57.3
QL05p063075 Quercus lobata HOM05D001151 ORTHO05D006836 2.5e-19 99.4 113 53.1
Cc09_g07160 Coffea canephora HOM05D001151 ORTHO05D006836 4.3e-19 98.6 109 53.2
Phvul.009G218200 Phaseolus vulgaris HOM05D001151 ORTHO05D006836 5.6e-19 98.2 131 45.0
Solyc02g069730.3 Solanum lycopersicum HOM05D001151 ORTHO05D006836 5.6e-19 98.2 109 56.0
Sopen02g018850 Solanum pennellii HOM05D001151 ORTHO05D006836 5.6e-19 98.2 109 56.0
AL7G33500 Arabidopsis lyrata HOM05D001151 ORTHO05D006836 7.3e-19 97.8 101 56.4
Lalb_Chr08g0233151 Lupinus albus HOM05D001151 ORTHO05D006836 9.6e-19 97.4 138 44.9
HanXRQChr11g0342561 Helianthus annuus HOM05D001151 ORTHO05D006836 1.6e-18 96.7 120 53.3
GSVIVG01037957001 Vitis vinifera HOM05D001151 ORTHO05D006836 1.6e-18 96.7 135 46.7
Aa31LG6G2780 Aethionema arabicum HOM05D001151 ORTHO05D006836 2.1e-18 96.3 115 50.4
BcaC01g00668 Brassica carinata HOM05D001151 ORTHO05D006836 2.1e-18 96.3 105 54.3
C03p82910 Brassica napus HOM05D001151 ORTHO05D006836 2.1e-18 96.3 105 54.3
Potri.011G154900 Populus trichocarpa HOM05D001151 ORTHO05D006836 2.1e-18 96.3 135 45.2
BcaB03g11671 Brassica carinata HOM05D001151 ORTHO05D006836 2.8e-18 95.9 101 54.5
A08p14840 Brassica napus HOM05D001151 ORTHO05D006836 2.8e-18 95.9 105 53.3
BolC3t20574H Brassica oleracea HOM05D001151 ORTHO05D006836 2.8e-18 95.9 109 52.3
BraA08t33468Z Brassica rapa HOM05D001151 ORTHO05D006836 2.8e-18 95.9 105 53.3
Ciclev10016765m.g Citrus clementina HOM05D001151 ORTHO05D006836 2.8e-18 95.9 108 52.8
Sabra11G0144800 Salix brachista HOM05D001151 ORTHO05D006836 2.8e-18 95.9 135 45.2
Oeu060327.1 Olea europaea HOM05D001151 ORTHO05D006836 4.8e-18 95.1 136 47.8
AT4G20390 Arabidopsis thaliana HOM05D001151 ORTHO05D006836 6.2e-18 94.7 101 54.5
MSTRG.16311 Avicennia marina HOM05D001151 ORTHO05D006836 6.2e-18 94.7 131 46.6
MD10G1241300 Malus domestica HOM05D001151 ORTHO05D006836 8.1e-18 94.4 139 42.4
Actinidia11300 Actinidia chinensis HOM05D001151 ORTHO05D006836 1.1e-17 94.0 110 53.6
Duzib235G0035 Durio zibethinus HOM05D001151 ORTHO05D006836 1.1e-17 94.0 133 48.1
PGSC0003DMG400021195 Solanum tuberosum HOM05D001151 ORTHO05D006836 1.4e-17 93.6 109 53.2
TWI38G0934 Tripterygium wilfordii HOM05D001151 ORTHO05D006836 1.4e-17 93.6 118 49.2
TWI63G0399 Tripterygium wilfordii HOM05D001151 ORTHO05D006836 1.4e-17 93.6 106 52.8
TAR627G1052 Trochodendron aralioides HOM05D001151 ORTHO05D006836 1.4e-17 93.6 135 47.4
CANSAT35G0921 Cannabis sativa HOM05D001151 ORTHO05D006836 2.4e-17 92.8 106 55.7
CARHR227220 Cardamine hirsuta HOM05D001151 ORTHO05D006836 2.4e-17 92.8 101 51.5
Cpa.g.sc832.1 Carica papaya HOM05D001151 ORTHO05D006836 2.4e-17 92.8 109 49.5
Nn7g37742 Nelumbo nucifera HOM05D001151 ORTHO05D006836 2.4e-17 92.8 125 50.4
Oeu052707.1 Olea europaea HOM05D001151 ORTHO05D006836 2.4e-17 92.8 133 45.9
SalBow8G1344 Salvia bowleyana HOM05D001151 ORTHO05D006836 2.4e-17 92.8 133 48.9
Aa31LG9G8660 Aethionema arabicum HOM05D001151 ORTHO05D006836 4.0e-17 92.0 105 51.4
arahy.Tifrunner.gnm1.ann1.RH6BR7 Arachis hypogaea HOM05D001151 ORTHO05D006836 4.0e-17 92.0 135 43.7
BcaC06g34540 Brassica carinata HOM05D001151 ORTHO05D006836 4.0e-17 92.0 114 48.2
A06p47100 Brassica napus HOM05D001151 ORTHO05D006836 4.0e-17 92.0 114 48.2
C07p27420 Brassica napus HOM05D001151 ORTHO05D006836 4.0e-17 92.0 114 48.2
BolC7t43272H Brassica oleracea HOM05D001151 ORTHO05D006836 4.0e-17 92.0 114 48.2
BraA06t27582Z Brassica rapa HOM05D001151 ORTHO05D006836 4.0e-17 92.0 114 48.2
Lj4g0007248 Lotus japonicus HOM05D001151 ORTHO05D006836 4.0e-17 92.0 135 42.2
PGR083G0430 Punica granatum HOM05D001151 ORTHO05D006836 4.0e-17 92.0 135 45.9
Sp7g18760 Schrenkiella parvula HOM05D001151 ORTHO05D006836 4.0e-17 92.0 101 51.5
arahy.Tifrunner.gnm1.ann1.S6J9QN Arachis hypogaea HOM05D001151 ORTHO05D006836 5.3e-17 91.7 135 43.7
COL.COLO4_26866 Corchorus olitorius HOM05D001151 ORTHO05D006836 5.3e-17 91.7 136 46.3
Thhalv10026298m.g Eutrema salsugineum HOM05D001151 ORTHO05D006836 5.3e-17 91.7 120 46.7
Migut.M01934 Erythranthe guttata HOM05D001151 ORTHO05D006836 6.9e-17 91.3 136 45.6
SalBow8G0157 Salvia bowleyana HOM05D001151 ORTHO05D006836 6.9e-17 91.3 133 48.1
Thhalv10001033m.g Eutrema salsugineum HOM05D001151 ORTHO05D006836 1.5e-16 90.1 114 46.5
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.5e-16 90.1 115 49.6
BcaB07g30519 Brassica carinata HOM05D001151 ORTHO05D006836 2.6e-16 89.4 126 46.0
BcaC06g31607 Brassica carinata HOM05D001151 ORTHO05D006836 2.6e-16 89.4 114 46.5
Glyma.15G191800 Glycine max HOM05D001151 ORTHO05D006836 2.6e-16 89.4 136 42.6
SpUn0524_0010 Schrenkiella parvula HOM05D001151 ORTHO05D006836 2.6e-16 89.4 114 45.6
VMungo0251G2869 Vigna mungo HOM05D001151 ORTHO05D006836 4.5e-16 88.6 138 41.3
Haze_05971 Corylus avellana HOM05D001151 ORTHO05D006836 5.8e-16 88.2 137 46.0
VMungo1309G2278 Vigna mungo HOM05D001151 ORTHO05D006836 5.8e-16 88.2 135 41.5
TPR.G28534 Trifolium pratense HOM05D001151 ORTHO05D006836 9.9e-16 87.4 134 41.0
Carub.0008s0395 Capsella rubella HOM05D001151 ORTHO05D006836 1.3e-15 87.0 114 47.4
CARHR178560 Cardamine hirsuta HOM05D001151 ORTHO05D006836 1.7e-15 86.7 114 46.5
AL8G15270 Arabidopsis lyrata HOM05D001151 ORTHO05D006836 2.2e-15 86.3 114 45.6
AT5G44550 Arabidopsis thaliana HOM05D001151 ORTHO05D006836 2.9e-15 85.9 114 44.7
C02p45080 Brassica napus HOM05D001151 ORTHO05D006836 2.9e-15 85.9 105 48.6
BolC2t10546H Brassica oleracea HOM05D001151 ORTHO05D006836 2.9e-15 85.9 105 48.6
Psat1g019520 Pisum sativum HOM05D001151 ORTHO05D006836 2.9e-15 85.9 129 41.9
SGA_v2.0_scaffold223G42882 Striga asiatica HOM05D001151 ORTHO05D006836 3.8e-15 85.5 133 44.4
Medtr8g089300 Medicago truncatula HOM05D001151 ORTHO05D006836 4.9e-15 85.1 138 39.1
PSO675G9129 Papaver somniferum HOM05D001151 ORTHO05D006836 4.9e-15 85.1 104 48.1
Aqoxy4G00085 Aquilegia oxysepala HOM05D001151 ORTHO05D006836 6.4e-15 84.7 133 44.4
BcaC03g16673 Brassica carinata HOM05D001151 ORTHO05D006836 6.4e-15 84.7 105 48.6
HanXRQChr11g0342571 Helianthus annuus HOM05D001151 ORTHO05D006836 6.4e-15 84.7 112 49.1
Medtr0097s0070 Medicago truncatula HOM05D001151 ORTHO05D006836 6.4e-15 84.7 134 40.3
A02p28460 Brassica napus HOM05D001151 ORTHO05D006836 8.4e-15 84.3 105 47.6
BraA02t07881Z Brassica rapa HOM05D001151 ORTHO05D006836 8.4e-15 84.3 105 47.6
Carub.0007s2077 Capsella rubella HOM05D001151 ORTHO05D006836 8.4e-15 84.3 95 51.6
PSO541G3810 Papaver somniferum HOM05D001151 ORTHO05D006836 8.4e-15 84.3 104 46.2
PSO541G5365 Papaver somniferum HOM05D001151 ORTHO05D006836 8.4e-15 84.3 104 46.2
Glyma.U031308 Glycine max HOM05D001151 ORTHO05D006836 1.1e-14 84.0 135 43.7
MELO3C021781.2 Cucumis melo HOM05D001151 ORTHO05D006836 1.4e-14 83.6 128 47.7
Gorai.010G144000 Gossypium raimondii HOM05D001151 ORTHO05D006836 2.4e-14 82.8 135 43.0
Ca_02383_v3 Cicer arietinum L. HOM05D001151 ORTHO05D006836 3.2e-14 82.4 133 40.6
Psat7g060880 Pisum sativum HOM05D001151 ORTHO05D006836 9.3e-14 80.9 135 39.3
Gohir.A06G119400 Gossypium hirsutum HOM05D001151 ORTHO05D006836 1.2e-13 80.5 135 42.2
TPR.G6272 Trifolium pratense HOM05D001151 ORTHO05D006836 2.1e-13 79.7 116 41.4
MD05G1263600 Malus domestica HOM05D001151 ORTHO05D006836 2.7e-13 79.3 111 43.2
Sed0027287 Sechium edule HOM05D001151 ORTHO05D006836 3.5e-13 79.0 130 44.6
Lj6g0010921 Lotus japonicus HOM05D001151 ORTHO05D006836 4.6e-13 78.6 133 40.6
ClCG01G008950 Citrullus lanatus HOM05D001151 ORTHO05D006836 7.9e-13 77.8 137 44.5
Glyma.08G129300 Glycine max HOM05D001151 ORTHO05D006836 1.0e-12 77.4 135 41.5
Glyma.09G083400 Glycine max HOM05D001151 ORTHO05D006836 1.1e-09 67.4 91 47.3
arahy.Tifrunner.gnm1.ann1.1BVQ2L Arachis hypogaea HOM05D001151 ORTHO05D006836 5.3e-09 65.1 90 42.2
MBI18_g28206_MAGBIO Magnolia biondii HOM05D001151 ORTHO05D006836 5.3e-09 65.1 93 45.2
Hma1.2p1_1028F.1_g249560 Hydrangea macrophylla HOM05D001151 ORTHO05D006836 7.6e-08 61.2 49 67.3
Hma1.2p1_1485F.1_g286490 Hydrangea macrophylla HOM05D001151 ORTHO05D006836 7.6e-08 61.2 49 67.3
Os12g0610800 Oryza sativa ssp. japonica HOM05D001151 ORTHO05D006836 2.2e-07 59.7 106 39.6


User provided reference genes

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