Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06714 Beta vulgaris HOM05D001390 ORTHO05D089240 3.8e-61 238.0 124 100.0
EL10Ac1g00272 Beta vulgaris HOM05D001390 ORTHO05D001522 7.9e-35 150.6 107 78.5
AUR62004489 Chenopodium quinoa HOM05D001390 ORTHO05D001522 3.3e-25 118.6 119 55.5
AUR62023464 Chenopodium quinoa HOM05D001390 ORTHO05D001522 2.2e-24 115.9 119 54.6
Sc01g0002710 Simmondsia chinensis HOM05D001390 ORTHO05D001522 4.7e-19 98.2 107 48.6
Hund16711 Selenicereus undatus HOM05D001390 ORTHO05D001522 6.8e-18 94.4 107 53.3
Hund27200 Selenicereus undatus HOM05D001390 ORTHO05D001522 2.8e-16 89.0 107 50.5
CANSAT56G0571 Cannabis sativa HOM05D001390 ORTHO05D001522 8.8e-10 67.4 106 40.6
GSVIVG01027120001 Vitis vinifera HOM05D001390 ORTHO05D001522 2.0e-09 66.2 108 38.0
Cfa003801 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.6e-09 65.9 102 40.2
Atru.chr5.663 Acer truncatum HOM05D001390 ORTHO05D001522 3.4e-09 65.5 106 37.7
Actinidia20240 Actinidia chinensis HOM05D001390 ORTHO05D001522 4.4e-09 65.1 109 37.6
Lj9C598G3 Lonicera japonica HOM05D001390 ORTHO05D001522 7.5e-09 64.3 105 39.0
Manes.05G023000 Manihot esculenta HOM05D001390 ORTHO05D001522 7.5e-09 64.3 107 39.3
Dinv35115 Davidia involucrata HOM05D001390 ORTHO05D001522 2.2e-08 62.8 108 36.1
TAR636G3487 Trochodendron aralioides HOM05D001390 ORTHO05D001522 2.2e-08 62.8 108 34.3
Nn1g00227 Nelumbo nucifera HOM05D001390 ORTHO05D001522 2.8e-08 62.4 108 33.3
CSS0049873 Camellia sinensis var. sinensis HOM05D001390 ORTHO05D001522 3.7e-08 62.0 109 35.8
Haze_15657 Corylus avellana HOM05D001390 ORTHO05D001522 3.7e-08 62.0 103 37.9
CsaV3_6G007160 Cucumis sativus L. HOM05D001390 ORTHO05D001522 3.7e-08 62.0 105 37.1
Cpa.g.sc96.12 Carica papaya HOM05D001390 ORTHO05D001522 8.3e-08 60.8 101 36.6
FAN10G0149 Fragaria x ananassa HOM05D001390 ORTHO05D001522 8.3e-08 60.8 112 37.5
FAN10G2771 Fragaria x ananassa HOM05D001390 ORTHO05D001522 8.3e-08 60.8 112 37.5
MELO3C022410.2 Cucumis melo HOM05D001390 ORTHO05D001522 1.4e-07 60.1 105 37.1
Glyma.07G055900 Glycine max HOM05D001390 ORTHO05D001522 1.4e-07 60.1 103 41.7
Glyma.16G024600 Glycine max HOM05D001390 ORTHO05D001522 1.4e-07 60.1 103 41.7
Peaxi162Scf00716g00016 Petunia axillaris HOM05D001390 ORTHO05D001522 1.4e-07 60.1 107 39.3
ClCG06G001240 Citrullus lanatus HOM05D001390 ORTHO05D001522 1.8e-07 59.7 105 38.1
FvH4_7g16420 Fragaria vesca HOM05D001390 ORTHO05D001522 2.4e-07 59.3 102 37.3
FAN06G3722 Fragaria x ananassa HOM05D001390 ORTHO05D001522 2.4e-07 59.3 102 37.3
Prupe.2G188000 Prunus persica HOM05D001390 ORTHO05D001522 2.4e-07 59.3 102 39.2
Rhsim07G0004400 Rhododendron simsii HOM05D001390 ORTHO05D001522 2.4e-07 59.3 109 36.7
VMungo0331G1667 Vigna mungo HOM05D001390 ORTHO05D001522 2.4e-07 59.3 103 39.8
TAR629G3253 Trochodendron aralioides HOM05D001390 ORTHO05D001522 3.1e-07 58.9 108 35.2
PGR031G0972 Punica granatum HOM05D001390 ORTHO05D001522 4.1e-07 58.5 106 38.7
Sopen05g029050 Solanum pennellii HOM05D001390 ORTHO05D001522 4.1e-07 58.5 100 39.0
FAN03G3144 Fragaria x ananassa HOM05D001390 ORTHO05D001522 7.0e-07 57.8 102 37.3
FAN06G3445 Fragaria x ananassa HOM05D001390 ORTHO05D001522 7.0e-07 57.8 102 36.3
RcHm_v2.0_Chr1g0359431 Rosa chinensis HOM05D001390 ORTHO05D001522 9.2e-07 57.4 102 37.3
Solyc05g050630.4 Solanum lycopersicum HOM05D001390 ORTHO05D001522 9.2e-07 57.4 100 39.0
Lsat_1_v5_gn_7_1141 Lactuca sativa HOM05D001390 ORTHO05D001522 1.2e-06 57.0 98 39.8
Sed0004722 Sechium edule HOM05D001390 ORTHO05D001522 1.6e-06 56.6 105 35.2
vmacro13159 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 1.6e-06 56.6 109 35.8
CiPaw.01G076500 Carya illinoinensis HOM05D001390 ORTHO05D001522 2.0e-06 56.2 102 37.3
FAN01G2109 Fragaria x ananassa HOM05D001390 ORTHO05D001522 2.0e-06 56.2 102 36.3
MD01G1080500 Malus domestica HOM05D001390 ORTHO05D001522 2.0e-06 56.2 102 37.3
QL04p060935 Quercus lobata HOM05D001390 ORTHO05D001522 2.0e-06 56.2 102 35.3
PSO063G3385 Papaver somniferum HOM05D001390 ORTHO05D001522 2.7e-06 55.8 112 34.8
PSO170G5166 Papaver somniferum HOM05D001390 ORTHO05D001522 2.7e-06 55.8 112 34.8
CAN.G986.5 Capsicum annuum HOM05D001390 ORTHO05D001522 3.5e-06 55.5 98 37.8
ECA236G1465 Erigeron canadensis HOM05D001390 ORTHO05D001522 4.5e-06 55.1 101 36.6
Phvul.006G113000 Phaseolus vulgaris HOM05D001390 ORTHO05D001522 4.5e-06 55.1 101 39.6
Potri.014G098600 Populus trichocarpa HOM05D001390 ORTHO05D001522 4.5e-06 55.1 107 32.7
Psat4g161040 Pisum sativum HOM05D001390 ORTHO05D001522 5.9e-06 54.7 108 35.2
Potri.002G170900 Populus trichocarpa HOM05D001390 ORTHO05D001522 5.9e-06 54.7 107 33.6
Solyc01g095900.4 Solanum lycopersicum HOM05D001390 ORTHO05D001522 5.9e-06 54.7 98 37.8
Ciclev10018452m.g Citrus clementina HOM05D001390 ORTHO05D001522 7.7e-06 54.3 107 35.5
Duzib133G1296 Durio zibethinus HOM05D001390 ORTHO05D001522 7.7e-06 54.3 107 37.4
Gohir.A12G112100 Gossypium hirsutum HOM05D001390 ORTHO05D001522 7.7e-06 54.3 107 38.3
Peaxi162Scf00786g00128 Petunia axillaris HOM05D001390 ORTHO05D001522 7.7e-06 54.3 98 38.8
Sopen01g039640 Solanum pennellii HOM05D001390 ORTHO05D001522 7.7e-06 54.3 98 37.8


User provided reference genes

Program Settings