Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 1.2e-28 129.0 62 100.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 1.2e-28 129.0 62 100.0
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 1.3e-22 109.0 53 100.0
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 1.3e-22 109.0 53 100.0
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.0e-22 107.1 53 96.2
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.0e-22 107.1 53 96.2
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 2.1e-20 101.7 53 90.6
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 6.2e-20 100.1 53 90.6
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 8.0e-20 99.8 53 90.6
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 1.0e-19 99.4 51 94.1
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 2.3e-19 98.2 50 94.0
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 3.1e-19 97.8 54 85.2
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 5.2e-19 97.1 53 86.8
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 5.2e-19 97.1 50 92.0
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 5.2e-19 97.1 53 86.8
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 5.2e-19 97.1 50 92.0
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 6.8e-19 96.7 54 85.2
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 6.8e-19 96.7 50 92.0
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 6.8e-19 96.7 50 92.0
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 6.8e-19 96.7 54 85.2
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.2e-18 95.9 54 81.5
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 1.2e-18 95.9 50 90.0
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 1.5e-18 95.5 50 90.0
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 1.5e-18 95.5 50 90.0
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 1.5e-18 95.5 50 90.0
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 2.0e-18 95.1 50 92.0
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 2.0e-18 95.1 50 92.0
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 2.0e-18 95.1 50 92.0
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 2.6e-18 94.7 53 84.9
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 3.4e-18 94.4 50 90.0
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 3.4e-18 94.4 53 86.8
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 4.4e-18 94.0 52 90.4
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 4.4e-18 94.0 52 90.4
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 4.4e-18 94.0 50 90.0
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 4.4e-18 94.0 50 90.0
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 5.8e-18 93.6 47 95.7
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 5.8e-18 93.6 52 90.4
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 5.8e-18 93.6 53 83.0
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 5.8e-18 93.6 54 87.0
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 7.5e-18 93.2 50 86.0
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 7.5e-18 93.2 48 91.7
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 7.5e-18 93.2 50 90.0
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 7.5e-18 93.2 50 90.0
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 7.5e-18 93.2 50 90.0
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 7.5e-18 93.2 50 90.0
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 7.5e-18 93.2 50 90.0
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 7.5e-18 93.2 53 81.1
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 9.8e-18 92.8 51 90.2
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 9.8e-18 92.8 53 81.1
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 9.8e-18 92.8 53 81.1
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 1.3e-17 92.4 52 88.5
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.3e-17 92.4 47 93.6
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.3e-17 92.4 51 90.2
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.3e-17 92.4 52 88.5
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 1.7e-17 92.0 50 90.0
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.2e-17 91.7 52 88.5
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.2e-17 91.7 51 90.2
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 2.2e-17 91.7 51 88.2
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 2.2e-17 91.7 51 90.2
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 2.9e-17 91.3 51 88.2
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 2.9e-17 91.3 51 88.2
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 2.9e-17 91.3 54 83.3
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.9e-17 91.3 52 86.5
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.9e-17 91.3 54 83.3
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 6.4e-17 90.1 53 81.1
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 6.4e-17 90.1 53 81.1
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 6.4e-17 90.1 51 86.3
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 6.4e-17 90.1 51 86.3
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 6.4e-17 90.1 51 84.3
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.1e-16 89.4 51 86.3
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.1e-16 89.4 53 83.0
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.1e-16 89.4 53 83.0
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.1e-16 89.4 51 88.2
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 1.1e-16 89.4 51 86.3
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 1.9e-16 88.6 54 79.6
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 1.9e-16 88.6 51 88.2
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.9e-16 88.6 51 88.2
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 1.9e-16 88.6 54 79.6
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 2.4e-16 88.2 52 84.6
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 2.4e-16 88.2 51 86.3
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 3.2e-16 87.8 52 82.7
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 4.1e-16 87.4 51 86.3
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 4.1e-16 87.4 51 86.3
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 4.1e-16 87.4 53 75.5
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 5.4e-16 87.0 51 84.3
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 5.4e-16 87.0 48 89.6
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 7.0e-16 86.7 51 84.3
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 7.0e-16 86.7 51 84.3
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.2e-15 85.9 51 84.3
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.2e-15 85.9 51 84.3
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.6e-15 85.5 48 87.5
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.6e-15 85.5 51 82.4
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.0e-15 85.1 50 82.0
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.0e-15 85.1 54 79.6
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.0e-15 85.1 54 79.6
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 2.0e-15 85.1 51 80.4
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 2.5e-13 78.2 48 79.2
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 5.6e-13 77.0 51 76.5
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 4.7e-12 73.9 42 90.5
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.5e-10 68.9 53 62.3
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.2e-09 65.1 54 59.3
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 6.4e-09 63.5 54 59.3
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.1e-08 62.8 29 93.1
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 9.2e-08 59.7 54 59.3
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 1.2e-07 59.3 45 64.4
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 1.2e-07 59.3 45 66.7
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 2.7e-07 58.2 48 62.5
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 3.9e-06 54.3 48 56.2


User provided reference genes

Program Settings