Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 1.6e-94 349.4 169 100.0
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 3.5e-49 198.7 124 83.9
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 1.8e-45 186.4 100 93.0
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 2.9e-40 169.1 98 85.7
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 3.8e-40 168.7 111 80.2
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.5e-39 166.8 100 85.0
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.9e-39 166.4 100 85.0
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 4.7e-38 161.8 99 78.8
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 7.0e-34 147.9 100 71.0
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 7.8e-33 144.4 111 65.8
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 1.0e-32 144.1 111 65.8
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 1.0e-32 144.1 104 66.3
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.7e-32 143.3 99 67.7
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 2.9e-32 142.5 99 67.7
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 2.9e-32 142.5 96 71.9
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 3.9e-32 142.1 99 69.7
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 6.6e-32 141.4 100 67.0
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 8.6e-32 141.0 100 67.0
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 1.9e-31 139.8 99 71.7
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.5e-31 139.4 99 70.7
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 3.3e-31 139.0 103 66.0
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 3.3e-31 139.0 96 70.8
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 3.3e-31 139.0 116 59.5
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 3.3e-31 139.0 132 56.1
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 4.3e-31 138.7 99 70.7
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 4.3e-31 138.7 99 66.7
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 4.3e-31 138.7 103 65.0
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 7.3e-31 137.9 98 65.3
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 7.3e-31 137.9 99 70.7
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 7.3e-31 137.9 99 70.7
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 7.3e-31 137.9 98 68.4
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 7.3e-31 137.9 98 68.4
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 7.3e-31 137.9 101 68.3
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 9.5e-31 137.5 101 68.3
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 1.2e-30 137.1 99 66.7
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 1.2e-30 137.1 99 69.7
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 1.2e-30 137.1 99 67.7
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 1.2e-30 137.1 100 68.0
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 1.6e-30 136.7 99 63.6
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.6e-30 136.7 103 65.0
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 1.6e-30 136.7 99 65.7
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 2.1e-30 136.3 97 66.0
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.1e-30 136.3 99 66.7
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 2.8e-30 136.0 99 65.7
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.8e-30 136.0 99 69.7
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 3.6e-30 135.6 99 65.7
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 3.6e-30 135.6 101 68.3
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 3.6e-30 135.6 97 66.0
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.6e-30 135.6 132 53.8
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 4.7e-30 135.2 99 65.7
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 4.7e-30 135.2 100 67.0
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 4.7e-30 135.2 132 54.5
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 4.7e-30 135.2 99 66.7
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 6.1e-30 134.8 101 67.3
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 6.1e-30 134.8 102 65.7
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 6.1e-30 134.8 132 53.0
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 1.0e-29 134.0 99 64.6
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 1.0e-29 134.0 132 53.8
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 1.0e-29 134.0 109 63.3
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 1.8e-29 133.3 116 56.9
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 1.8e-29 133.3 105 64.8
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 1.8e-29 133.3 132 53.8
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 1.8e-29 133.3 98 68.4
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 2.3e-29 132.9 99 62.6
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 2.3e-29 132.9 99 62.6
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 3.1e-29 132.5 104 63.5
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 3.1e-29 132.5 98 66.3
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 4.0e-29 132.1 99 62.6
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 5.2e-29 131.7 99 62.6
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 1.2e-28 130.6 99 61.6
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 1.2e-28 130.6 98 67.3
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.2e-28 130.6 103 64.1
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 1.5e-28 130.2 132 53.0
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 3.4e-28 129.0 99 61.6
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 3.4e-28 129.0 98 65.3
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 9.8e-28 127.5 99 64.6
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.3e-27 127.1 99 59.6
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 2.4e-26 122.9 98 63.3
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 5.4e-26 121.7 98 64.3
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 7.0e-26 121.3 97 63.9
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 9.2e-26 120.9 98 58.2
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 1.2e-25 120.6 97 56.7
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 1.2e-25 120.6 97 62.9
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 1.2e-25 120.6 97 63.9
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 1.2e-25 120.6 96 64.6
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 2.7e-25 119.4 98 60.2
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 2.7e-25 119.4 98 62.2
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 2.7e-25 119.4 98 62.2
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 4.6e-25 118.6 98 60.2
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 6.0e-25 118.2 92 65.2
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.0e-24 117.5 98 57.1
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 2.3e-24 116.3 97 58.8
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 3.0e-24 115.9 98 61.2
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 8.6e-24 114.4 103 55.3
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.1e-23 114.0 100 59.0
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 2.8e-22 109.4 101 53.5
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.8e-22 109.4 121 50.4
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 1.4e-21 107.1 104 53.8
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 1.4e-21 107.1 92 57.6
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 4.0e-21 105.5 105 55.2
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 4.0e-21 105.5 105 55.2
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.0e-21 105.5 81 64.2
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 5.2e-21 105.1 101 54.5
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 6.8e-21 104.8 97 51.5
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 1.5e-20 103.6 101 52.5
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 2.0e-20 103.2 97 50.5
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 2.0e-20 103.2 101 54.5
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 5.8e-20 101.7 95 51.6
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 7.5e-20 101.3 99 46.5
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 6.4e-19 98.2 73 65.8
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 5.1e-16 88.6 64 67.2
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 1.1e-15 87.4 98 44.9
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 1.1e-15 87.4 68 63.2
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 1.5e-12 77.0 98 45.9
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 7.5e-12 74.7 96 35.4
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 4.9e-11 72.0 68 57.4
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 9.2e-10 67.8 89 34.8
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 3.6e-06 55.8 92 33.7


User provided reference genes

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