Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06592 Beta vulgaris HOM05D007625 ORTHO05D009738 2.8e-111 405.2 196 100.0
Hund20557 Selenicereus undatus HOM05D007625 ORTHO05D009738 1.4e-62 243.4 252 52.0
AUR62035873 Chenopodium quinoa HOM05D007625 ORTHO05D009738 8.1e-58 227.6 197 58.9
Actinidia00027 Actinidia chinensis HOM05D007625 ORTHO05D009738 2.2e-55 219.5 254 48.0
CSS0007271 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 2.2e-55 219.5 252 48.8
Nn3g21433 Nelumbo nucifera HOM05D007625 ORTHO05D009738 4.9e-55 218.4 222 51.8
Sabra10G0014200 Salix brachista HOM05D007625 ORTHO05D009738 2.4e-54 216.1 253 48.2
TWI09G0101 Tripterygium wilfordii HOM05D007625 ORTHO05D009738 9.2e-54 214.2 259 46.7
Atru.chr4.2832 Acer truncatum HOM05D007625 ORTHO05D009738 7.8e-53 211.1 249 47.0
CSS0032939 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 7.8e-53 211.1 271 45.0
Potri.010G024900 Populus trichocarpa HOM05D007625 ORTHO05D009738 1.3e-52 210.3 213 54.9
Prupe.1G137400 Prunus persica HOM05D007625 ORTHO05D009738 2.3e-52 209.5 253 47.4
Manes.03G194700 Manihot esculenta HOM05D007625 ORTHO05D009738 3.9e-52 208.8 259 46.3
QL06p008815 Quercus lobata HOM05D007625 ORTHO05D009738 6.6e-52 208.0 254 46.9
TAR633G2367 Trochodendron aralioides HOM05D007625 ORTHO05D009738 6.6e-52 208.0 253 46.6
Ciclev10005679m.g Citrus clementina HOM05D007625 ORTHO05D009738 7.3e-51 204.5 251 45.4
Thecc.04G284200 Theobroma cacao HOM05D007625 ORTHO05D009738 7.3e-51 204.5 259 45.6
CANSAT78G1499 Cannabis sativa HOM05D007625 ORTHO05D009738 2.8e-50 202.6 253 45.8
RcHm_v2.0_Chr4g0422131 Rosa chinensis HOM05D007625 ORTHO05D009738 2.8e-50 202.6 256 43.4
Aqoxy2G02997 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 4.7e-50 201.8 249 43.8
Lalb_Chr13g0303611 Lupinus albus HOM05D007625 ORTHO05D009738 4.7e-50 201.8 256 45.7
GSVIVG01017755001 Vitis vinifera HOM05D007625 ORTHO05D009738 4.7e-50 201.8 242 46.7
Cc03_g01990 Coffea canephora HOM05D007625 ORTHO05D009738 8.1e-50 201.1 242 46.7
FAN07G2640 Fragaria x ananassa HOM05D007625 ORTHO05D009738 2.4e-49 199.5 247 44.5
SGA_v2.0_scaffold428G51521 Striga asiatica HOM05D007625 ORTHO05D009738 4.0e-49 198.7 251 47.0
Lsat_1_v5_gn_5_53001 Lactuca sativa HOM05D007625 ORTHO05D009738 1.2e-48 197.2 212 52.4
Ca_21505_v3 Cicer arietinum L. HOM05D007625 ORTHO05D009738 2.0e-48 196.4 251 45.0
Lj4g0027770 Lotus japonicus HOM05D007625 ORTHO05D009738 2.6e-48 196.1 251 45.0
Rhsim02G0009500 Rhododendron simsii HOM05D007625 ORTHO05D009738 2.6e-48 196.1 251 44.6
BcaB06g25757 Brassica carinata HOM05D007625 ORTHO05D009738 3.4e-48 195.7 252 44.8
Migut.N00092 Erythranthe guttata HOM05D007625 ORTHO05D009738 3.4e-48 195.7 251 44.6
MBI18_g04687_MAGBIO Magnolia biondii HOM05D007625 ORTHO05D009738 3.4e-48 195.7 253 45.8
MD13G1169000 Malus domestica HOM05D007625 ORTHO05D009738 7.6e-48 194.5 247 44.9
FvH4_4g17960 Fragaria vesca HOM05D007625 ORTHO05D009738 9.9e-48 194.1 247 43.3
Medtr4g119840 Medicago truncatula HOM05D007625 ORTHO05D009738 9.9e-48 194.1 252 44.0
PGR031G0588 Punica granatum HOM05D007625 ORTHO05D009738 1.3e-47 193.7 251 45.4
Sp3g14890 Schrenkiella parvula HOM05D007625 ORTHO05D009738 1.3e-47 193.7 252 43.3
Eucgr.B01310 Eucalyptus grandis HOM05D007625 ORTHO05D009738 3.8e-47 192.2 210 51.9
Psat4g025880 Pisum sativum HOM05D007625 ORTHO05D009738 6.4e-47 191.4 252 44.0
VMungo1215G1867 Vigna mungo HOM05D007625 ORTHO05D009738 6.4e-47 191.4 251 43.4
Duzib212G0442 Durio zibethinus HOM05D007625 ORTHO05D009738 1.4e-46 190.3 259 42.5
Thhalv10021369m.g Eutrema salsugineum HOM05D007625 ORTHO05D009738 1.4e-46 190.3 252 43.7
Phvul.003G105100 Phaseolus vulgaris HOM05D007625 ORTHO05D009738 1.4e-46 190.3 252 44.4
arahy.Tifrunner.gnm1.ann1.QKB3E6 Arachis hypogaea HOM05D007625 ORTHO05D009738 4.2e-46 188.7 266 42.1
TPR.G3171 Trifolium pratense HOM05D007625 ORTHO05D009738 4.2e-46 188.7 257 43.2
Glyma.07G247900 Glycine max HOM05D007625 ORTHO05D009738 5.4e-46 188.3 252 42.9
Rhsim02G0010500 Rhododendron simsii HOM05D007625 ORTHO05D009738 5.4e-46 188.3 210 50.0
Dinv44384 Davidia involucrata HOM05D007625 ORTHO05D005073 9.3e-46 187.6 233 48.1
BraA05t22123Z Brassica rapa HOM05D007625 ORTHO05D009738 1.2e-45 187.2 277 41.2
Lj3A816T27 Lonicera japonica HOM05D007625 ORTHO05D009738 1.2e-45 187.2 215 50.2
PSO017G7039 Papaver somniferum HOM05D007625 ORTHO05D009738 1.2e-45 187.2 259 42.1
C05p49750 Brassica napus HOM05D007625 ORTHO05D009738 1.6e-45 186.8 260 41.9
BolC5t33727H Brassica oleracea HOM05D007625 ORTHO05D009738 2.1e-45 186.4 277 40.1
Gohir.D09G240200 Gossypium hirsutum HOM05D007625 ORTHO05D009738 2.1e-45 186.4 263 41.8
arahy.Tifrunner.gnm1.ann1.96EVWK Arachis hypogaea HOM05D007625 ORTHO05D009738 3.5e-45 185.7 259 42.1
FAN12G1696 Fragaria x ananassa HOM05D007625 ORTHO05D009738 6.0e-45 184.9 206 47.6
Cpa.g.sc16.167 Carica papaya HOM05D007625 ORTHO05D009738 7.8e-45 184.5 192 51.6
FAN12G4294 Fragaria x ananassa HOM05D007625 ORTHO05D009738 1.3e-44 183.7 242 42.6
Gohir.A09G239300 Gossypium hirsutum HOM05D007625 ORTHO05D009738 2.3e-44 183.0 256 42.2
Sc19g0005180 Simmondsia chinensis HOM05D007625 ORTHO05D009738 5.1e-44 181.8 197 52.3
CARHR091770 Cardamine hirsuta HOM05D007625 ORTHO05D009738 8.7e-44 181.0 252 40.9
Hma1.2p1_1567F.1_g291060 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 1.5e-43 180.3 187 53.5
CDE12G0709 Ceratophyllum demersum HOM05D007625 ORTHO05D009738 2.5e-43 179.5 225 44.9
AL3G29430 Arabidopsis lyrata HOM05D007625 ORTHO05D009738 5.6e-43 178.3 252 40.1
ECA240G3588 Erigeron canadensis HOM05D007625 ORTHO05D009738 5.6e-43 178.3 251 42.2
Gorai.006G263200 Gossypium raimondii HOM05D007625 ORTHO05D009738 7.3e-43 177.9 223 44.8
FAN17G2144 Fragaria x ananassa HOM05D007625 ORTHO05D009738 3.6e-42 175.6 273 39.2
BcaNung06438 Brassica carinata HOM05D007625 ORTHO05D009738 8.1e-42 174.5 238 41.6
ATR0796G164 Amborella trichopoda HOM05D007625 ORTHO05D009738 1.1e-41 174.1 259 39.4
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 1.1e-41 174.1 258 41.5
HanXRQChr03g0080751 Helianthus annuus HOM05D007625 ORTHO05D009738 2.0e-40 169.9 252 39.7
AT3G16565 Arabidopsis thaliana HOM05D007625 ORTHO05D009738 4.5e-40 168.7 285 37.9
Os01g0120400 Oryza sativa ssp. japonica HOM05D007625 ORTHO05D009738 2.2e-39 166.4 254 38.2
Hma1.2p1_0078F.1_g040640 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 2.9e-39 166.0 187 51.9
Lj3A819G38 Lonicera japonica HOM05D007625 ORTHO05D009738 2.9e-39 166.0 244 43.0
Aa31LG8G3700 Aethionema arabicum HOM05D007625 ORTHO05D009738 1.1e-38 164.1 247 42.1
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 4.2e-38 162.2 223 40.8
vmacro15237 Vaccinium macrocarpon HOM05D007625 ORTHO05D009738 1.2e-37 160.6 212 43.4
Pp3c1_7890 Physcomitrium patens HOM05D007625 ORTHO05D009738 6.2e-34 148.3 254 37.0
Glyma.17G026200 Glycine max HOM05D007625 ORTHO05D009738 7.6e-32 141.4 214 40.7
unitig_0.g621 Utricularia gibba HOM05D007625 ORTHO05D009738 5.5e-30 135.2 118 57.6
SMO356G0461 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 2.8e-26 122.9 250 31.2
SMO002G0002 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.2e-24 117.5 241 31.1
Zm00001eb334800 Zea mays HOM05D007625 ORTHO05D009738 1.2e-24 117.5 179 39.7
BcaB03g15776 Brassica carinata HOM05D007625 ORTHO05D009738 1.7e-23 113.6 112 53.6
AagrBONN_evm.TU.Sc2ySwM_228.2358 Anthoceros agrestis HOM05D007625 ORTHO05D009738 8.2e-18 94.7 184 33.7
Carub.0003s1629 Capsella rubella HOM05D007625 ORTHO05D009738 8.2e-18 94.7 165 35.8
Cpa.g.c47082 Carica papaya HOM05D007625 ORTHO05D009738 8.2e-18 94.7 79 59.5
Aqoxy2G02999 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 3.8e-15 85.9 62 62.9
MCO16G322 Micromonas commoda HOM05D007625 ORTHO05D009738 1.4e-14 84.0 210 29.0
Medtr4g123440 Medicago truncatula HOM05D007625 ORTHO05D009738 4.6e-13 79.0 115 41.7
MD16G1169600 Malus domestica HOM05D007625 ORTHO05D009738 1.3e-10 70.9 57 57.9


User provided reference genes

Program Settings