Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 0.0e+00 1076.2 529 100.0
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.6e-167 592.8 396 76.0
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.0e-163 580.9 396 74.2
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 2.8e-153 546.2 397 69.5
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 4.7e-137 492.3 408 60.3
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 1.6e-124 450.7 405 57.0
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 1.9e-122 443.7 407 56.5
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 2.8e-121 439.9 404 55.9
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 4.0e-120 436.0 398 55.3
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.5e-119 434.1 406 53.9
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 9.9e-119 431.4 404 54.7
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 2.2e-118 430.3 318 65.4
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 2.9e-118 429.9 332 63.9
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 2.9e-118 429.9 401 56.9
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 6.4e-118 428.7 407 55.3
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 6.4e-118 428.7 306 65.7
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 8.4e-118 428.3 405 53.8
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 8.4e-118 428.3 412 54.1
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 3.2e-117 426.4 407 54.1
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 3.0e-115 419.9 405 55.1
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.9e-115 419.5 327 61.8
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 3.9e-115 419.5 395 53.7
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 8.7e-115 418.3 304 64.1
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 1.1e-114 417.9 306 65.7
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 1.5e-114 417.5 299 65.9
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 1.9e-114 417.2 309 64.4
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 2.5e-114 416.8 307 64.5
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 7.4e-114 415.2 306 63.4
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 3.7e-113 412.9 299 65.2
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 3.7e-113 412.9 329 61.4
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 4.8e-113 412.5 388 56.7
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 1.4e-112 411.0 400 53.0
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.4e-112 411.0 408 54.2
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 3.1e-112 409.8 396 56.6
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 5.3e-112 409.1 308 65.6
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 6.9e-112 408.7 368 57.3
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 3.4e-111 406.4 308 62.0
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 3.4e-111 406.4 316 62.3
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 4.5e-111 406.0 388 54.1
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 5.8e-111 405.6 307 62.5
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 7.6e-111 405.2 306 60.1
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 1.7e-110 404.1 385 53.8
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 3.8e-110 402.9 396 55.3
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 3.8e-110 402.9 382 52.1
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 3.8e-110 402.9 401 51.9
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 4.9e-110 402.5 332 58.7
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 4.9e-110 402.5 305 63.0
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 8.4e-110 401.7 304 60.9
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 1.1e-109 401.4 312 58.3
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.1e-109 401.4 299 62.9
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.4e-109 401.0 306 59.5
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 2.5e-109 400.2 335 57.0
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 2.5e-109 400.2 397 51.1
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 3.2e-109 399.8 304 60.2
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 4.2e-109 399.4 407 49.9
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 7.1e-109 398.7 306 58.8
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 7.1e-109 398.7 304 60.9
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 2.7e-108 396.7 299 62.2
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 6.0e-108 395.6 306 59.2
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 6.0e-108 395.6 306 59.2
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 6.0e-108 395.6 402 50.0
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 6.0e-108 395.6 299 62.2
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 7.9e-108 395.2 300 61.3
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.3e-107 394.4 307 59.9
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.8e-107 394.0 334 60.8
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 2.3e-107 393.7 302 59.9
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.3e-107 393.7 307 60.3
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 3.9e-107 392.9 306 58.5
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 3.9e-107 392.9 322 58.4
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 5.1e-107 392.5 307 61.2
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 8.7e-107 391.7 307 59.9
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 8.7e-107 391.7 299 60.9
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 3.3e-106 389.8 299 61.9
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 4.3e-106 389.4 344 54.9
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 4.3e-106 389.4 402 51.2
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 7.4e-106 388.7 457 47.3
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 9.7e-106 388.3 297 60.9
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 2.2e-105 387.1 297 61.3
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 2.8e-105 386.7 304 59.2
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 3.7e-105 386.3 307 59.3
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 6.9e-104 382.1 302 60.3
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 6.9e-104 382.1 320 57.8
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 7.7e-103 378.6 299 59.5
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 1.7e-102 377.5 297 60.3
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 8.5e-102 375.2 297 59.9
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 1.1e-101 374.8 297 60.3
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 3.2e-101 373.2 315 57.5
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 3.2e-101 373.2 309 57.3
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 2.7e-100 370.2 339 54.0
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 1.0e-99 368.2 299 57.5
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.3e-97 361.3 330 56.7
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 4.1e-96 356.3 368 48.6
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 1.7e-94 350.9 308 59.1
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 5.5e-93 345.9 303 54.1
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 5.5e-93 345.9 316 53.2
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 5.5e-93 345.9 282 64.2
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 2.1e-92 344.0 334 50.9
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 4.7e-92 342.8 334 53.9
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 1.4e-91 341.3 320 52.8
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 1.8e-91 340.9 312 53.8
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 9.7e-90 335.1 333 50.8
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 1.1e-85 321.6 287 58.5
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 1.5e-82 311.2 304 49.0
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 2.2e-81 307.4 371 45.8
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 6.3e-81 305.8 349 47.3
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 4.1e-80 303.1 277 55.6
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 2.0e-79 300.8 226 63.7
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 8.5e-78 295.4 224 61.6
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 2.6e-74 283.9 251 54.2
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 3.7e-73 280.0 304 47.7
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 2.0e-71 274.2 281 51.2
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 2.7e-68 263.8 307 46.3
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 3.0e-67 260.4 298 47.3
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 9.2e-56 222.2 163 63.8
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 1.3e-54 218.4 277 46.6
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 9.2e-48 195.7 271 41.0
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 2.3e-43 181.0 132 66.7
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 3.5e-39 167.2 122 60.7
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 1.0e-38 165.6 305 31.8
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 2.5e-37 161.0 304 30.3
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 1.8e-35 154.8 180 43.9
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 1.1e-32 145.6 121 57.9
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 3.9e-30 137.1 173 42.8
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 2.4e-24 117.9 230 33.0
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 3.2e-24 117.5 150 40.0
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 7.1e-24 116.3 129 48.1
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 4.6e-23 113.6 77 66.2
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 1.0e-22 112.5 102 55.9
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 2.5e-21 107.8 68 73.5
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 7.3e-21 106.3 250 27.6
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 3.6e-20 104.0 299 23.7
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 2.0e-18 98.2 118 45.8
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.4e-17 93.2 90 51.1
Actinidia40231 Actinidia chinensis HOM05D005247 ORTHO05D006571 1.6e-15 88.6 91 47.3
Hund28065 Selenicereus undatus HOM05D000003 ORTHO05D000006 2.0e-10 71.6 157 35.0
Hund28074 Selenicereus undatus HOM05D000003 ORTHO05D000006 2.0e-10 71.6 157 35.0
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 5.8e-10 70.1 297 22.2
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 6.4e-09 66.6 51 52.9
FAN22G1325 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.9e-08 65.1 67 52.2
Eucgr.H03758 Eucalyptus grandis HOM05D005247 ORTHO05D006571 9.3e-08 62.8 46 52.2


User provided reference genes

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