Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.7e-88 329.3 171 100.0
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 2.1e-54 216.1 174 69.5
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 8.4e-43 177.6 180 62.2
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 2.1e-30 136.3 161 57.1
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 2.4e-29 132.9 153 52.9
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 2.4e-29 132.9 182 50.5
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 2.6e-28 129.4 147 57.1
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.6e-28 129.4 158 53.2
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 2.6e-28 129.4 176 48.9
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.3e-27 127.1 163 51.5
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 2.9e-27 125.9 165 50.3
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 3.8e-27 125.6 115 64.3
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 3.8e-27 125.6 170 50.0
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.4e-26 123.6 149 56.4
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 2.4e-26 122.9 173 48.0
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 7.1e-26 121.3 129 55.0
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 7.1e-26 121.3 103 66.0
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 9.3e-26 120.9 121 60.3
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 9.3e-26 120.9 143 55.9
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 1.2e-25 120.6 144 54.9
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.2e-25 120.6 160 50.0
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.2e-25 120.6 127 57.5
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 1.6e-25 120.2 130 56.9
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 2.1e-25 119.8 129 58.1
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 2.1e-25 119.8 128 53.1
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 2.1e-25 119.8 128 53.1
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 2.1e-25 119.8 128 53.1
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 2.1e-25 119.8 179 46.4
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 2.1e-25 119.8 179 46.4
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 2.1e-25 119.8 179 46.4
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 3.5e-25 119.0 128 53.1
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 3.5e-25 119.0 159 49.1
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 3.5e-25 119.0 97 66.0
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 3.5e-25 119.0 160 49.4
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 3.5e-25 119.0 162 48.1
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 4.6e-25 118.6 127 53.5
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 4.6e-25 118.6 127 53.5
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 4.6e-25 118.6 92 70.7
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 4.6e-25 118.6 119 60.5
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 4.6e-25 118.6 119 60.5
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 4.6e-25 118.6 149 51.7
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 7.9e-25 117.9 92 70.7
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.0e-24 117.5 92 67.4
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 1.0e-24 117.5 124 56.5
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 1.3e-24 117.1 92 68.5
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.3e-24 117.1 160 48.8
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 1.3e-24 117.1 174 44.8
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 1.3e-24 117.1 171 45.0
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.3e-24 117.1 157 52.9
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.3e-24 117.1 117 59.0
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 1.8e-24 116.7 112 58.0
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.8e-24 116.7 113 62.8
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 1.8e-24 116.7 92 69.6
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 2.3e-24 116.3 92 69.6
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 2.3e-24 116.3 121 56.2
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 3.0e-24 115.9 151 51.0
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.0e-24 115.9 151 51.0
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 3.9e-24 115.5 143 50.3
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 3.9e-24 115.5 91 67.0
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 3.9e-24 115.5 154 47.4
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 6.7e-24 114.8 85 70.6
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 6.7e-24 114.8 90 67.8
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 8.7e-24 114.4 98 62.2
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 1.1e-23 114.0 90 68.9
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 1.1e-23 114.0 164 48.8
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 1.5e-23 113.6 93 67.7
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.9e-23 113.2 126 56.3
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 1.9e-23 113.2 142 50.0
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 2.5e-23 112.8 112 55.4
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 4.3e-23 112.1 158 44.3
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 5.6e-23 111.7 152 48.7
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 7.4e-23 111.3 164 43.3
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 9.6e-23 110.9 103 57.3
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 1.3e-22 110.5 98 61.2
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 2.1e-22 109.8 170 47.6
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 2.1e-22 109.8 85 68.2
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 2.8e-22 109.4 170 46.5
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 3.7e-22 109.0 118 54.2
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 4.8e-22 108.6 78 75.6
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 4.8e-22 108.6 120 53.3
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 8.1e-22 107.8 108 56.5
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 1.8e-21 106.7 105 59.0
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 2.4e-21 106.3 163 48.5
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 2.4e-21 106.3 126 55.6
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 3.1e-21 105.9 171 46.2
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 4.0e-21 105.5 97 55.7
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 6.9e-21 104.8 111 56.8
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 6.9e-21 104.8 167 46.7
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 9.0e-21 104.4 73 71.2
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 2.6e-20 102.8 101 56.4
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 3.4e-20 102.4 73 76.7
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.0e-19 100.9 70 70.0
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 1.7e-19 100.1 91 63.7
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 4.9e-19 98.6 82 64.6
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 8.4e-19 97.8 87 66.7
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 5.5e-18 95.1 63 74.6
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 1.2e-17 94.0 85 58.8
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 2.1e-17 93.2 114 50.9
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 8.7e-16 87.8 60 68.3
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 1.3e-14 84.0 65 63.1
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 2.4e-13 79.7 100 50.0
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 4.2e-10 68.9 103 42.7
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 5.5e-10 68.6 67 55.2
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 9.3e-10 67.8 95 44.2
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 7.4e-07 58.2 172 36.0
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 1.3e-06 57.4 114 34.2


User provided reference genes

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