Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 7.2e-175 617.1 298 100.0
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.1e-119 433.7 255 76.5
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 1.6e-110 403.3 260 72.3
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 3.2e-98 362.5 276 62.3
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 1.9e-95 353.2 276 62.7
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 4.8e-94 348.6 268 60.8
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 1.4e-93 347.1 278 59.0
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.8e-93 346.7 271 59.8
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.2e-92 344.0 275 60.7
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 3.4e-92 342.4 272 56.6
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 3.4e-92 342.4 273 59.0
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 4.5e-92 342.0 273 60.1
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 5.8e-92 341.7 268 58.2
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 5.8e-92 341.7 277 57.4
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 7.6e-92 341.3 271 57.9
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.7e-91 340.1 255 60.4
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 4.9e-91 338.6 273 57.5
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 4.9e-91 338.6 281 57.3
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 6.5e-91 338.2 275 58.5
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.4e-90 337.0 236 66.9
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.9e-90 336.7 271 56.8
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 2.5e-90 336.3 274 57.7
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 4.2e-90 335.5 273 58.6
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 4.2e-90 335.5 275 57.1
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 5.5e-90 335.1 274 57.3
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 4.6e-89 332.0 255 62.4
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 7.9e-89 331.3 273 55.3
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.8e-88 330.1 269 57.6
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 3.0e-88 329.3 273 57.1
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 3.0e-88 329.3 270 57.0
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 3.0e-88 329.3 273 56.4
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 6.7e-88 328.2 269 54.6
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 6.7e-88 328.2 257 56.8
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 2.5e-87 326.2 283 54.4
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 3.3e-87 325.9 252 57.9
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 4.3e-87 325.5 274 55.5
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 5.7e-87 325.1 278 56.1
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 7.4e-87 324.7 271 56.8
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 7.4e-87 324.7 273 56.0
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 1.3e-86 323.9 277 55.2
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 1.4e-85 320.5 271 54.6
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.8e-85 320.1 291 52.9
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.4e-85 319.7 262 58.0
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 4.1e-85 318.9 291 52.9
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 5.3e-85 318.5 272 55.5
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 9.0e-85 317.8 271 55.7
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 9.0e-85 317.8 270 55.2
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.2e-84 317.4 252 57.5
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.4e-84 315.8 269 54.3
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 5.9e-84 315.1 252 56.3
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 7.6e-84 314.7 259 58.3
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 1.0e-83 314.3 274 55.5
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.3e-83 313.9 268 55.6
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.7e-83 313.5 245 58.4
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 3.8e-83 312.4 294 53.1
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 8.4e-83 311.2 268 54.1
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.9e-82 310.1 273 54.2
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 1.9e-82 310.1 250 55.6
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 3.2e-82 309.3 273 53.5
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.6e-81 307.0 277 52.7
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 2.1e-81 306.6 239 59.8
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 2.7e-81 306.2 326 46.9
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 2.7e-81 306.2 332 48.2
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 4.6e-81 305.4 251 55.4
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.8e-80 303.5 265 52.1
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.9e-79 300.1 273 53.1
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 1.6e-78 297.0 273 52.4
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.2e-78 296.6 295 49.5
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 2.8e-78 296.2 251 54.2
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 2.8e-78 296.2 347 44.7
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 4.8e-78 295.4 227 61.2
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 4.8e-78 295.4 300 47.7
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 2.4e-77 293.1 332 44.3
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 5.3e-77 292.0 262 53.1
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 6.9e-77 291.6 269 50.9
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.0e-75 287.7 255 56.1
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 2.2e-75 286.6 283 50.5
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 2.2e-75 286.6 255 52.5
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.9e-75 286.2 262 55.0
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 4.2e-74 282.3 261 51.3
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 7.2e-74 281.6 239 53.1
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 2.1e-73 280.0 235 54.5
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.2e-68 264.2 277 46.6
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 2.6e-68 263.1 277 48.0
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 2.2e-67 260.0 202 59.9
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 4.2e-66 255.8 207 59.9
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 4.2e-66 255.8 219 55.3
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.1e-65 253.4 207 57.0
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 4.7e-65 252.3 202 57.9
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.0e-64 251.1 210 55.7
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 3.0e-64 249.6 284 46.1
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 8.8e-64 248.1 272 47.1
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 3.3e-63 246.1 207 56.0
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 7.4e-63 245.0 143 78.3
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 7.4e-63 245.0 202 57.9
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 7.4e-63 245.0 206 55.8
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.4e-61 240.7 200 54.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 2.4e-61 240.0 200 53.5
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 1.7e-59 233.8 193 58.0
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.6e-57 227.3 315 39.7
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.0e-56 224.6 189 59.3
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.7e-51 207.2 260 39.6
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 6.5e-51 205.3 190 50.5
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 4.2e-50 202.6 349 34.4
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 3.6e-49 199.5 276 39.1
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.0e-48 198.0 232 42.7
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 2.2e-46 190.3 183 50.3
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 6.3e-46 188.7 215 47.9
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 6.8e-40 168.7 128 62.5
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.1e-37 161.4 176 46.0
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 5.0e-35 152.5 180 40.0
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 2.4e-29 133.7 183 38.8
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.6e-25 120.9 129 46.5
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 5.2e-24 115.9 169 40.8
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 8.3e-22 108.6 171 36.3
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.3e-14 84.7 90 47.8
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 4.9e-14 82.8 71 53.5
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 8.3e-14 82.0 256 28.9
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 2.0e-07 60.8 73 42.5
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 5.8e-07 59.3 49 51.0


User provided reference genes

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