Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.7e-49 199.1 106 100.0
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 6.8e-27 124.0 103 71.8
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.2e-26 123.2 106 67.0
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 1.5e-21 106.3 109 63.3
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 2.5e-21 105.5 110 59.1
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 5.6e-21 104.4 109 60.6
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 7.3e-21 104.0 109 57.8
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 7.3e-21 104.0 111 61.3
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 9.5e-21 103.6 109 58.7
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 9.5e-21 103.6 113 58.4
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 1.6e-20 102.8 109 58.7
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 2.1e-20 102.4 93 63.4
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 3.6e-20 101.7 94 63.8
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 3.6e-20 101.7 110 60.0
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 4.7e-20 101.3 109 58.7
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 6.2e-20 100.9 97 62.9
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 8.1e-20 100.5 102 60.8
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.4e-19 99.8 109 58.7
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.4e-19 99.8 109 58.7
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.8e-19 99.4 109 57.8
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 2.3e-19 99.0 93 59.1
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 2.3e-19 99.0 108 59.3
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 4.0e-19 98.2 111 55.9
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 4.0e-19 98.2 106 57.5
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 5.2e-19 97.8 107 56.1
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 6.8e-19 97.4 105 56.2
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 6.8e-19 97.4 103 60.2
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 1.5e-18 96.3 98 63.3
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 2.0e-18 95.9 106 56.6
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 2.6e-18 95.5 109 57.8
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 3.4e-18 95.1 108 60.2
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 4.4e-18 94.7 107 55.1
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 4.4e-18 94.7 107 55.1
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 4.4e-18 94.7 112 55.4
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 7.5e-18 94.0 109 56.0
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 9.8e-18 93.6 99 57.6
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 9.8e-18 93.6 107 58.9
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 1.3e-17 93.2 105 53.3
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 1.7e-17 92.8 109 58.7
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 1.7e-17 92.8 109 54.1
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 2.2e-17 92.4 111 56.8
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 2.2e-17 92.4 106 56.6
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 2.2e-17 92.4 98 57.1
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 2.9e-17 92.0 113 56.6
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.9e-17 92.0 94 59.6
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 2.9e-17 92.0 111 53.2
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 4.9e-17 91.3 109 55.0
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 6.4e-17 90.9 99 56.6
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.1e-16 90.1 109 54.1
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.4e-16 89.7 109 50.5
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.9e-16 89.4 110 55.5
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 1.9e-16 89.4 110 57.3
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 2.4e-16 89.0 108 54.6
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 2.4e-16 89.0 102 57.8
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 3.2e-16 88.6 104 54.8
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 3.2e-16 88.6 113 52.2
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 4.1e-16 88.2 95 57.9
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.2e-15 86.7 100 56.0
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 1.2e-15 86.7 109 48.6
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.2e-15 86.7 112 51.8
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 1.6e-15 86.3 106 50.9
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.6e-15 86.3 110 55.5
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.6e-15 86.3 94 56.4
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 2.7e-15 85.5 108 53.7
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.5e-15 85.1 107 54.2
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 4.6e-15 84.7 105 53.3
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 4.6e-15 84.7 106 51.9
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 6.0e-15 84.3 109 48.6
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 6.0e-15 84.3 113 48.7
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.0e-14 83.6 108 52.8
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.3e-14 83.2 109 51.4
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.7e-14 82.8 109 46.8
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.3e-14 82.4 109 53.2
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 2.3e-14 82.4 91 53.8
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 3.0e-14 82.0 86 64.0
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 5.1e-14 81.3 72 59.7
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 8.6e-14 80.5 109 50.5
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 8.6e-14 80.5 110 48.2
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 8.6e-14 80.5 106 50.0
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 8.6e-14 80.5 65 64.6
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 1.1e-13 80.1 109 49.5
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.1e-13 80.1 58 67.2
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.1e-13 80.1 56 71.4
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.1e-13 80.1 100 53.0
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.9e-13 79.3 93 54.8
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.3e-13 78.6 56 69.6
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 3.3e-13 78.6 100 53.0
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 4.3e-13 78.2 110 51.8
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 4.3e-13 78.2 132 48.5
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 7.3e-13 77.4 81 65.4
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 7.3e-13 77.4 59 62.7
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 9.5e-13 77.0 86 60.5
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 1.6e-12 76.3 83 63.9
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.1e-12 75.9 110 47.3
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 2.1e-12 75.9 101 50.5
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 2.1e-12 75.9 96 54.2
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 3.6e-12 75.1 56 67.9
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 4.7e-12 74.7 113 49.6
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 4.7e-12 74.7 110 50.0
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.4e-11 73.2 53 69.8
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.3e-11 72.4 113 48.7
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 5.2e-11 71.2 62 58.1
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 1.2e-10 70.1 62 56.5
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.0e-10 69.3 109 44.0
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.0e-10 69.3 40 77.5
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 1.3e-09 66.6 56 60.7
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 2.4e-08 62.4 86 46.5
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 4.1e-08 61.6 106 38.7
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 5.4e-08 61.2 96 40.6
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 2.7e-07 58.9 105 43.8
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 5.1e-06 54.7 48 56.2
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 6.6e-06 54.3 94 39.4


User provided reference genes

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