Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 1.3e-82 309.7 155 100.0
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 1.2e-61 240.0 150 78.0
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 1.8e-52 209.5 142 69.7
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 1.8e-52 209.5 143 67.8
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.2e-48 196.8 143 65.7
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 4.6e-48 194.9 143 63.6
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 7.8e-48 194.1 142 67.6
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 2.3e-47 192.6 149 65.8
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 3.0e-47 192.2 134 67.2
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.0e-47 192.2 141 63.1
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 8.7e-47 190.7 140 64.3
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 8.7e-47 190.7 140 66.4
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 8.7e-47 190.7 143 67.8
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.1e-46 190.3 140 65.7
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 1.5e-46 189.9 139 64.7
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 4.3e-46 188.3 141 63.1
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 4.3e-46 188.3 141 63.1
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 7.3e-46 187.6 136 64.0
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 7.3e-46 187.6 145 60.7
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 7.3e-46 187.6 141 61.7
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 9.6e-46 187.2 143 65.7
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.3e-45 186.8 149 59.7
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 1.4e-44 183.3 137 62.8
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 4.0e-44 181.8 145 57.9
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 5.3e-44 181.4 147 57.8
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 6.9e-44 181.0 145 57.9
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.2e-43 180.3 143 58.7
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 2.0e-43 179.5 140 60.0
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 2.6e-43 179.1 138 60.9
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 2.6e-43 179.1 136 61.0
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 3.4e-43 178.7 139 62.6
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 4.4e-43 178.3 141 62.4
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 5.8e-43 177.9 139 61.2
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 5.8e-43 177.9 141 62.4
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 7.6e-43 177.6 139 59.7
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 9.9e-43 177.2 143 58.7
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 1.7e-42 176.4 138 59.4
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 2.2e-42 176.0 133 62.4
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 2.2e-42 176.0 149 61.1
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 2.9e-42 175.6 137 59.1
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 3.8e-42 175.3 141 61.7
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 3.8e-42 175.3 145 56.6
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 4.9e-42 174.9 138 62.3
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 4.9e-42 174.9 139 58.3
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 6.4e-42 174.5 138 60.1
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 6.4e-42 174.5 136 63.2
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 6.4e-42 174.5 137 59.1
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 1.4e-41 173.3 136 58.8
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 1.9e-41 172.9 138 61.6
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.4e-41 172.6 138 61.6
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 2.4e-41 172.6 136 58.8
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.2e-41 171.8 131 64.1
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 4.2e-41 171.8 135 58.5
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 4.2e-41 171.8 142 60.6
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.6e-40 169.9 138 60.9
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 1.6e-40 169.9 143 57.3
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 2.1e-40 169.5 141 61.0
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 3.5e-40 168.7 136 58.1
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 6.0e-40 167.9 146 54.8
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.0e-39 167.2 142 61.3
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 3.9e-39 165.2 138 56.5
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 5.1e-39 164.9 142 55.6
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 8.7e-39 164.1 138 60.1
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.5e-38 163.3 138 56.5
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 4.3e-38 161.8 142 52.1
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.3e-37 160.2 138 55.1
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 6.2e-37 157.9 151 53.6
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 2.6e-35 152.5 145 47.6
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 2.7e-32 142.5 131 53.4
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 6.0e-32 141.4 135 51.9
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 1.0e-31 140.6 131 50.4
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 1.3e-31 140.2 136 53.7
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 1.8e-31 139.8 150 49.3
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 1.8e-31 139.8 150 49.3
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 2.3e-31 139.4 143 46.9
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 5.1e-31 138.3 148 49.3
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 1.1e-30 137.1 155 49.0
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.5e-30 136.7 140 53.6
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 2.5e-30 136.0 144 49.3
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 3.3e-30 135.6 156 48.7
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 7.4e-30 134.4 138 52.2
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 9.6e-30 134.0 143 49.7
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 1.6e-29 133.3 149 47.0
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 3.7e-29 132.1 152 46.7
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 6.2e-29 131.3 152 46.7
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 4.0e-28 128.6 136 44.9
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 5.3e-28 128.3 117 51.3
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 2.6e-27 125.9 122 50.8
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 4.5e-27 125.2 142 47.9
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 5.8e-27 124.8 146 45.9
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 7.6e-27 124.4 130 46.9
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 3.2e-25 119.0 144 45.8
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.9e-23 112.1 88 58.0
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 6.7e-23 111.3 140 45.0
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 3.7e-21 105.5 167 35.9
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 3.1e-20 102.4 78 59.0
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 2.6e-19 99.4 121 44.6
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 1.4e-17 93.6 142 34.5
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 1.8e-15 86.7 120 41.7
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 7.4e-14 81.3 185 28.6
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.6e-13 80.1 148 36.5
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 2.2e-13 79.7 148 36.5
Lalb_Chr04g0250741 Lupinus albus HOM05D007615 ORTHO05D009643 6.7e-07 58.2 43 55.8


User provided reference genes

Program Settings