Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 0.0e+00 1540.0 801 100.0
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 4.6e-277 958.0 805 66.3
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.3e-274 949.9 805 66.0
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 3.3e-251 872.1 802 62.3
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.2e-235 820.5 829 58.6
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 5.7e-219 765.0 804 56.2
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 2.3e-207 726.5 805 54.4
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 2.6e-179 633.3 725 51.6
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 1.2e-171 607.8 792 47.9
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 1.9e-166 590.5 784 48.5
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 3.7e-165 586.3 776 48.1
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 3.7e-165 586.3 776 48.1
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 8.1e-165 585.1 826 46.1
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 2.7e-160 570.1 771 45.7
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 1.3e-159 567.8 801 45.2
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 1.3e-157 561.2 771 45.4
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.7e-157 559.7 776 45.7
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 1.1e-156 558.1 802 44.5
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 4.1e-156 556.2 776 46.6
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.5e-155 554.3 779 44.4
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.6e-155 553.5 789 44.5
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 3.4e-155 553.1 789 44.5
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 1.0e-154 551.6 770 45.2
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 5.0e-154 549.3 725 46.1
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 5.0e-154 549.3 744 46.8
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 6.5e-154 548.9 770 45.2
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 8.5e-154 548.5 751 46.3
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 1.1e-153 548.1 806 43.4
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 4.2e-153 546.2 773 44.4
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 4.2e-153 546.2 779 44.8
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.2e-152 544.7 778 45.6
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 2.1e-152 543.9 783 46.2
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.7e-152 543.5 789 43.9
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 4.6e-152 542.7 800 44.8
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 6.1e-152 542.3 813 43.8
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 1.0e-151 541.6 787 44.7
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 6.7e-151 538.9 785 45.7
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 8.7e-151 538.5 772 45.7
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 5.7e-150 535.8 787 45.2
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 1.3e-149 534.6 751 45.4
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 3.7e-149 533.1 774 44.4
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.1e-148 530.0 807 43.2
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 6.9e-148 528.9 775 44.5
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 7.7e-147 525.4 799 43.4
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 2.2e-146 523.9 779 44.8
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 3.8e-146 523.1 770 43.4
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 5.0e-146 522.7 781 44.9
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 8.5e-146 521.9 775 43.9
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 2.7e-144 516.9 773 43.3
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 6.1e-144 515.8 775 42.8
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 2.3e-143 513.8 757 44.4
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 3.0e-143 513.5 784 44.0
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 6.7e-143 512.3 783 42.8
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.5e-142 511.1 771 43.7
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 2.0e-142 510.8 763 42.9
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 3.3e-142 510.0 775 43.1
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 3.7e-141 506.5 745 45.2
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 1.4e-140 504.6 728 44.5
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 5.3e-140 502.7 794 43.6
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 6.9e-140 502.3 753 44.0
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 1.2e-139 501.5 771 43.1
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.0e-139 500.7 779 43.5
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 2.6e-139 500.4 768 42.4
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 3.4e-139 500.0 760 44.7
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 5.9e-139 499.2 781 42.4
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 2.9e-138 496.9 787 42.6
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 7.9e-136 488.8 773 41.1
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 1.4e-135 488.0 720 43.8
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 2.6e-134 483.8 788 42.6
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 8.2e-133 478.8 495 56.6
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 1.1e-132 478.4 734 42.9
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.6e-131 474.6 806 42.3
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 8.0e-128 462.2 784 41.2
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 2.8e-125 453.8 754 40.7
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 3.1e-124 450.3 726 42.0
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 4.1e-124 449.9 774 41.9
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 2.7e-123 447.2 719 41.6
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 1.0e-122 445.3 765 40.9
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 1.3e-122 444.9 722 41.3
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.9e-122 443.7 732 40.2
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 2.6e-118 430.6 753 39.4
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 1.6e-115 421.4 782 39.3
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 2.0e-115 421.0 671 42.0
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 1.0e-114 418.7 772 39.6
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 8.6e-114 415.6 648 42.3
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 1.1e-113 415.2 801 38.3
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 4.9e-109 399.8 757 39.4
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.2e-107 395.2 775 37.2
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 1.0e-106 392.1 820 37.1
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 4.7e-104 383.3 759 37.2
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 4.4e-102 376.7 785 37.2
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 1.1e-100 372.1 789 38.5
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 5.4e-100 369.8 738 37.8
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 2.0e-99 367.9 693 38.1
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 1.0e-98 365.5 734 37.2
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.2e-96 358.6 792 36.2
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 3.6e-96 357.1 716 36.9
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 5.2e-95 353.2 799 35.9
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 1.2e-94 352.1 481 45.5
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 4.4e-94 350.1 773 36.0
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 2.9e-93 347.4 489 43.6
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 2.4e-92 344.4 806 34.5
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 2.3e-90 337.8 496 44.4
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 8.6e-90 335.9 706 36.8
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 3.6e-88 330.5 761 35.7
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 1.1e-87 328.9 780 34.1
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 1.1e-87 328.9 780 34.1
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 1.3e-85 322.0 678 37.6
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 1.1e-84 318.9 450 47.6
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 7.8e-83 312.8 410 48.0
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 3.0e-82 310.8 718 34.8
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 2.9e-77 294.3 793 34.2
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 4.9e-77 293.5 492 40.2
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 1.2e-72 278.9 505 40.2
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 9.6e-65 252.7 669 34.4
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 1.3e-64 252.3 312 46.2
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 9.6e-57 226.1 375 40.3
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 9.3e-52 209.5 354 40.7
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 1.1e-41 176.0 169 56.2
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 7.4e-41 173.3 429 33.6
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 4.8e-40 170.6 171 58.5
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 6.9e-39 166.8 142 61.3
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 6.5e-37 160.2 357 33.3
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 1.4e-36 159.1 120 66.7
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 1.4e-36 159.1 370 31.6
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 1.4e-36 159.1 136 59.6
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 7.2e-36 156.8 255 42.0
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 7.9e-35 153.3 197 46.7
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 4.3e-33 147.5 210 41.4
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 4.8e-32 144.1 312 31.4
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 2.1e-27 128.6 151 49.7
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 1.0e-26 126.3 141 50.4
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 1.1e-25 122.9 150 46.7
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 1.7e-24 119.0 295 31.2
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 2.0e-22 112.1 74 73.0
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 2.2e-21 108.6 141 48.9
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 3.8e-21 107.8 583 28.0
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 1.9e-20 105.5 182 41.2
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 3.7e-16 91.3 75 62.7
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 3.7e-16 91.3 72 58.3
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 7.7e-14 83.6 106 45.3
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 5.5e-12 77.4 130 44.6
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 9.4e-12 76.6 55 69.1
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 9.4e-12 76.6 108 38.9
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 2.1e-11 75.5 65 61.5
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 4.7e-11 74.3 61 59.0
Sc11g0006970 Simmondsia chinensis HOM05D004806 ORTHO05D005397 2.6e-09 68.6 109 46.8
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 1.4e-07 62.8 42 66.7


User provided reference genes

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