Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 1.1e-189 666.4 329 100.0
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 6.4e-124 448.0 308 76.0
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 8.3e-124 447.6 308 75.3
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 8.1e-111 404.4 310 66.1
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 6.4e-108 394.8 303 67.0
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 8.4e-108 394.4 300 68.0
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 3.0e-97 359.4 309 60.8
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 7.4e-96 354.8 310 60.3
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 6.2e-95 351.7 309 59.9
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 8.1e-95 351.3 312 59.3
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.4e-94 350.5 310 59.7
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 9.0e-94 347.8 315 59.4
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.5e-93 347.1 315 54.3
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 5.8e-93 345.1 312 57.4
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 5.8e-93 345.1 310 58.4
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 9.9e-93 344.4 312 58.3
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.3e-92 344.0 310 57.7
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 6.4e-92 341.7 320 56.6
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.1e-91 340.9 326 56.4
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.4e-91 340.5 313 56.9
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 2.4e-91 339.7 315 56.8
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 2.4e-91 339.7 311 56.3
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 2.4e-91 339.7 310 58.4
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 4.2e-91 339.0 321 56.7
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 5.5e-91 338.6 314 57.3
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 5.5e-91 338.6 313 56.9
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 9.3e-91 337.8 313 56.9
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.6e-90 337.0 315 55.9
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 2.7e-90 336.3 314 55.7
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 2.7e-90 336.3 310 55.8
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 2.7e-90 336.3 298 58.4
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 3.5e-90 335.9 310 56.1
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 3.5e-90 335.9 312 56.4
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 6.0e-90 335.1 312 57.7
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 6.0e-90 335.1 313 56.5
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 7.9e-90 334.7 311 56.3
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.0e-89 334.3 318 55.7
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 1.0e-89 334.3 309 58.6
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 1.3e-89 334.0 310 57.7
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 2.3e-89 333.2 313 56.5
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 3.0e-89 332.8 318 56.0
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 3.9e-89 332.4 318 55.7
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 6.7e-89 331.6 295 58.6
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 6.7e-89 331.6 295 58.6
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.1e-88 330.9 315 55.9
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 1.1e-88 330.9 310 55.5
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.5e-88 330.5 311 55.3
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.9e-88 330.1 331 53.8
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.9e-88 330.1 331 53.8
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 5.6e-88 328.6 315 51.1
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 5.6e-88 328.6 309 57.6
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 7.4e-88 328.2 312 54.8
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 9.6e-88 327.8 315 52.4
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.6e-87 327.0 312 54.2
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.1e-87 326.6 315 52.1
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 2.8e-87 326.2 315 52.4
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 3.7e-87 325.9 263 62.7
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 8.2e-87 324.7 315 54.6
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 4.0e-86 322.4 316 51.3
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 6.9e-86 321.6 315 51.4
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 6.9e-86 321.6 315 51.4
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 6.9e-86 321.6 315 51.4
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.5e-85 320.5 314 54.5
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.5e-85 320.5 289 58.5
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.0e-85 320.1 296 56.8
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 2.6e-85 319.7 314 54.1
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.3e-84 317.4 312 53.5
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 2.2e-84 316.6 315 49.8
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 3.8e-84 315.8 293 54.9
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 6.5e-84 315.1 317 51.1
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 8.4e-84 314.7 295 53.9
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 1.1e-83 314.3 332 48.5
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 1.4e-83 313.9 317 50.8
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 4.2e-83 312.4 312 54.2
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 9.3e-83 311.2 310 52.6
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 2.7e-82 309.7 316 52.8
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.5e-82 309.3 298 54.7
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 4.6e-82 308.9 312 52.2
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 3.0e-81 306.2 320 51.6
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 6.7e-81 305.1 309 51.8
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 8.7e-81 304.7 308 53.9
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.1e-80 304.3 330 51.2
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.8e-79 299.7 247 61.1
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.8e-79 298.9 298 53.7
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 8.2e-79 298.1 314 53.2
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.4e-78 297.4 242 61.6
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.4e-78 297.4 313 51.8
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 1.3e-76 290.8 311 50.2
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.3e-76 290.8 248 59.3
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 8.5e-76 288.1 310 51.0
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.7e-74 283.1 303 51.8
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 1.8e-73 280.4 231 60.6
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.2e-71 273.5 241 56.8
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 6.3e-71 271.9 309 48.5
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 6.3e-71 271.9 288 49.7
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.5e-69 267.3 292 48.3
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.7e-68 263.8 258 55.0
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 3.4e-61 239.6 214 58.9
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 2.3e-57 226.9 228 51.3
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 2.3e-57 226.9 319 44.5
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 1.5e-56 224.2 310 42.6
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 5.7e-56 222.2 242 51.7
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.1e-54 216.5 224 49.6
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.5e-51 207.6 319 42.0
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 7.2e-51 205.3 204 52.5
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 6.1e-42 175.6 320 36.2
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.5e-40 171.0 158 51.9
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 6.1e-26 122.5 209 35.9
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.8e-25 120.9 145 44.1
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 3.4e-24 116.7 294 33.0
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 6.6e-20 102.4 102 52.9
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 7.3e-19 99.0 100 52.0
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 3.7e-15 86.7 95 49.5
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 7.8e-13 79.0 83 53.0
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 3.9e-12 76.6 229 26.6
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 5.1e-12 76.3 100 43.0


User provided reference genes

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