Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04657 Beta vulgaris HOM05D007860 ORTHO05D009950 4.2e-33 144.1 70 100.0
Sc10g0001510 Simmondsia chinensis HOM05D007860 ORTHO05D009950 3.1e-12 74.7 45 75.6
Glyma.18G290700 Glycine max HOM05D007860 ORTHO05D009950 1.2e-11 72.8 49 65.3
unitig_747.g21379 Utricularia gibba HOM05D007860 ORTHO05D009950 1.2e-11 72.8 68 54.4
Glyma.02G092000 Glycine max HOM05D007860 ORTHO05D009950 3.5e-11 71.2 49 63.3
Cc00_g31060 Coffea canephora HOM05D007860 ORTHO05D009950 5.9e-11 70.5 48 64.6
Phvul.008G011200 Phaseolus vulgaris HOM05D007860 ORTHO05D009950 5.9e-11 70.5 47 66.0
Cfa009596 Carpinus fangiana HOM05D007860 ORTHO05D009950 7.7e-11 70.1 47 70.2
CiPaw.01G285600 Carya illinoinensis HOM05D007860 ORTHO05D009950 1.0e-10 69.7 48 62.5
CiPaw.01G286200 Carya illinoinensis HOM05D007860 ORTHO05D009950 1.0e-10 69.7 48 62.5
VMungo1383G1282 Vigna mungo HOM05D007860 ORTHO05D009950 1.0e-10 69.7 43 69.8
Lalb_Chr11g0073451 Lupinus albus HOM05D007860 ORTHO05D009950 1.3e-10 69.3 44 68.2
Cc02_g07910 Coffea canephora HOM05D007860 ORTHO05D009950 1.7e-10 68.9 48 62.5
RcHm_v2.0_Chr4g0445811 Rosa chinensis HOM05D007860 ORTHO05D009950 1.7e-10 68.9 49 65.3
TPR.G1333 Trifolium pratense HOM05D007860 ORTHO05D009950 1.7e-10 68.9 49 63.3
CAN.G786.12 Capsicum annuum HOM05D007860 ORTHO05D009950 2.2e-10 68.6 48 68.8
CDE08G0617 Ceratophyllum demersum HOM05D007860 ORTHO05D009950 2.2e-10 68.6 46 65.2
Hund16092 Selenicereus undatus HOM05D007860 ORTHO05D009950 2.2e-10 68.6 48 64.6
arahy.Tifrunner.gnm1.ann1.WKZY2Y Arachis hypogaea HOM05D007860 ORTHO05D009950 2.9e-10 68.2 42 71.4
Sabra10G0157800 Salix brachista HOM05D007860 ORTHO05D009950 2.9e-10 68.2 48 60.4
Nn3g16785 Nelumbo nucifera HOM05D007860 ORTHO05D009950 3.8e-10 67.8 47 59.6
Prupe.1G341800 Prunus persica HOM05D007860 ORTHO05D009950 3.8e-10 67.8 49 63.3
Nn4g22694 Nelumbo nucifera HOM05D007860 ORTHO05D009950 5.0e-10 67.4 42 69.0
Solyc04g150108.1 Solanum lycopersicum HOM05D007860 ORTHO05D009950 5.0e-10 67.4 48 66.7
PGSC0003DMG400027747 Solanum tuberosum HOM05D007860 ORTHO05D009950 5.0e-10 67.4 48 66.7
Migut.E01407 Erythranthe guttata HOM05D007860 ORTHO05D009950 6.5e-10 67.0 48 62.5
Migut.E01421 Erythranthe guttata HOM05D007860 ORTHO05D009950 6.5e-10 67.0 48 62.5
Medtr7g026210 Medicago truncatula HOM05D007860 ORTHO05D009950 6.5e-10 67.0 49 63.3
Oeu017367.1 Olea europaea HOM05D007860 ORTHO05D009950 6.5e-10 67.0 45 64.4
Gohir.D04G062700 Gossypium hirsutum HOM05D007860 ORTHO05D009950 8.5e-10 66.6 48 60.4
Gorai.012G070100 Gossypium raimondii HOM05D007860 ORTHO05D009950 8.5e-10 66.6 48 60.4
Psat3g182840 Pisum sativum HOM05D007860 ORTHO05D009950 8.5e-10 66.6 43 67.4
Lj1g0016082 Lotus japonicus HOM05D007860 ORTHO05D009950 1.1e-09 66.2 49 61.2
Manes.09G185000 Manihot esculenta HOM05D007860 ORTHO05D009950 1.1e-09 66.2 49 63.3
Aqoxy4G02946 Aquilegia oxysepala HOM05D007860 ORTHO05D009950 1.9e-09 65.5 48 60.4
Gohir.A05G349600 Gossypium hirsutum HOM05D007860 ORTHO05D009950 1.9e-09 65.5 48 60.4
Gohir.A07G000500 Gossypium hirsutum HOM05D007860 ORTHO05D009950 1.9e-09 65.5 48 60.4
HanXRQChr08g0220681 Helianthus annuus HOM05D007860 ORTHO05D009950 1.9e-09 65.5 49 65.3
HPP92_012590 Vanilla planifolia HOM05D007860 ORTHO05D009950 1.9e-09 65.5 47 63.8
DCAR_011692 Daucus carota HOM05D007860 ORTHO05D009950 2.5e-09 65.1 49 63.3
Peaxi162Scf00760g00224 Petunia axillaris HOM05D007860 ORTHO05D009950 2.5e-09 65.1 48 60.4
Zm00001eb205410 Zea mays HOM05D007860 ORTHO05D009950 2.5e-09 65.1 45 64.4
SalBow8G2293 Salvia bowleyana HOM05D007860 ORTHO05D009950 3.2e-09 64.7 47 66.0
SpUn0576_0010 Schrenkiella parvula HOM05D007860 ORTHO05D009950 3.2e-09 64.7 37 81.1
Thecc.10G043200 Theobroma cacao HOM05D007860 ORTHO05D009950 3.2e-09 64.7 48 58.3
Actinidia13876 Actinidia chinensis HOM05D007860 ORTHO05D009950 4.2e-09 64.3 44 63.6
Lsat_1_v5_gn_8_15760 Lactuca sativa HOM05D007860 ORTHO05D009950 4.2e-09 64.3 48 64.6
TWI63G0334 Tripterygium wilfordii HOM05D007860 ORTHO05D009950 4.2e-09 64.3 42 66.7
Aa31LG3G410 Aethionema arabicum HOM05D007860 ORTHO05D009950 5.5e-09 63.9 42 71.4
ClCG09G019790 Citrullus lanatus HOM05D007860 ORTHO05D009950 5.5e-09 63.9 44 68.2
THA.LOC104817766 Tarenaya hassleriana HOM05D007860 ORTHO05D009950 7.2e-09 63.5 42 71.4
Ciclev10033443m.g Citrus clementina HOM05D007860 ORTHO05D009950 9.4e-09 63.2 37 73.0
CsaV3_5G026630 Cucumis sativus L. HOM05D007860 ORTHO05D009950 9.4e-09 63.2 64 51.6
MD16G1008700 Malus domestica HOM05D007860 ORTHO05D009950 1.2e-08 62.8 43 67.4
Potri.010G204200 Populus trichocarpa HOM05D007860 ORTHO05D009950 1.6e-08 62.4 48 56.2
Sed0021911 Sechium edule HOM05D007860 ORTHO05D009950 1.6e-08 62.4 48 62.5
AT4G26055 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 2.1e-08 62.0 38 73.7
Lalb_Chr10g0091671 Lupinus albus HOM05D007860 ORTHO05D009950 2.1e-08 62.0 44 63.6
MBI05_g22876_MAGBIO Magnolia biondii HOM05D007860 ORTHO05D009950 2.1e-08 62.0 42 61.9
vmacro04194 Vaccinium macrocarpon HOM05D007860 ORTHO05D009950 2.1e-08 62.0 47 61.7
CSS0034636 Camellia sinensis var. sinensis HOM05D007860 ORTHO05D009950 2.7e-08 61.6 50 56.0
Carub.0007s1490 Capsella rubella HOM05D007860 ORTHO05D009950 2.7e-08 61.6 37 75.7
MELO3C033702.2 Cucumis melo HOM05D007860 ORTHO05D009950 2.7e-08 61.6 47 63.8
COL.COLO4_15031 Corchorus olitorius HOM05D007860 ORTHO05D009950 3.6e-08 61.2 40 70.0
Sp6g18800 Schrenkiella parvula HOM05D007860 ORTHO05D009950 6.1e-08 60.5 48 64.6
C07p54670 Brassica napus HOM05D007860 ORTHO05D009950 8.0e-08 60.1 37 81.1
BolC7t45956H Brassica oleracea HOM05D007860 ORTHO05D009950 8.0e-08 60.1 37 81.1
A03p56460 Brassica napus HOM05D002589 ORTHO05D002742 1.0e-07 59.7 37 78.4
BraA03t14716Z Brassica rapa HOM05D007860 ORTHO05D009950 1.0e-07 59.7 37 78.4
AL7G26930 Arabidopsis lyrata HOM05D007860 ORTHO05D009950 2.3e-07 58.5 37 73.0
BcaC07g38219 Brassica carinata HOM05D007860 ORTHO05D009950 4.0e-07 57.8 38 73.7
A08p20930 Brassica napus HOM05D007860 ORTHO05D009950 4.0e-07 57.8 38 73.7
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 4.0e-07 57.8 38 73.7
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 4.0e-07 57.8 38 73.7
BraA08t34046Z Brassica rapa HOM05D007860 ORTHO05D009950 4.0e-07 57.8 38 73.7
Thhalv10026736m.g Eutrema salsugineum HOM05D007860 ORTHO05D009950 4.0e-07 57.8 38 73.7
CARHR233560 Cardamine hirsuta HOM05D007860 ORTHO05D009950 5.2e-07 57.4 43 67.4
FAN22G0325 Fragaria x ananassa HOM05D007860 ORTHO05D009950 5.2e-07 57.4 59 54.2
AT5G57080 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 1.2e-06 56.2 41 65.9
PSO170G0009 Papaver somniferum HOM05D007860 ORTHO05D009950 1.5e-06 55.8 42 61.9
BcaB01g04442 Brassica carinata HOM05D007860 ORTHO05D009950 2.6e-06 55.1 41 65.9
BraA03t10609Z Brassica rapa HOM05D007860 ORTHO05D009950 2.6e-06 55.1 41 65.9


User provided reference genes

Program Settings