Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 0.0e+00 1183.7 640 100.0
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 6.3e-253 877.5 667 69.9
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.4e-191 673.7 458 75.8
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 2.4e-191 672.9 574 71.4
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 4.2e-188 662.1 562 70.8
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 2.0e-182 643.3 657 53.7
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 1.0e-181 641.0 662 54.1
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 4.6e-179 632.1 626 54.5
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 3.9e-178 629.0 562 56.6
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 1.2e-174 617.5 557 56.7
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 3.8e-173 612.5 675 48.7
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 1.9e-172 610.1 555 55.0
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 2.7e-171 606.3 670 49.7
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 1.0e-170 604.4 694 47.7
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 8.8e-170 601.3 558 54.5
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 4.4e-169 599.0 645 49.5
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 3.7e-168 595.9 577 53.9
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 2.4e-167 593.2 526 56.7
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 1.2e-166 590.9 546 55.9
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 2.0e-166 590.1 546 54.9
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 1.3e-165 587.4 547 52.7
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 4.2e-164 582.4 648 48.9
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 4.7e-163 578.9 551 53.0
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 2.6e-161 573.2 496 59.1
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.7e-160 570.5 664 47.9
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 2.8e-160 569.7 569 50.8
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 4.8e-160 568.9 545 52.1
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 8.2e-160 568.2 549 52.8
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.6e-158 563.9 484 58.7
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 2.6e-158 563.1 558 52.0
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 5.9e-158 562.0 545 51.7
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.0e-157 561.2 503 56.7
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 2.9e-157 559.7 664 46.7
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 3.8e-157 559.3 560 51.8
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 1.5e-156 557.4 552 51.3
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 6.8e-154 548.5 650 48.0
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 3.4e-153 546.2 557 51.5
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 5.7e-153 545.4 578 47.9
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 7.5e-153 545.0 571 48.5
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 1.3e-152 544.3 530 51.5
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 2.2e-152 543.5 552 52.4
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 1.0e-149 534.6 513 52.6
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 3.8e-149 532.7 650 46.3
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 1.9e-148 530.4 549 49.2
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 2.5e-148 530.0 554 50.7
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 4.7e-147 525.8 611 47.0
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 3.0e-146 523.1 479 55.5
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 4.0e-146 522.7 535 49.7
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 3.4e-145 519.6 529 49.7
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 9.8e-145 518.1 528 50.0
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 1.2e-142 511.1 515 50.5
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 2.0e-142 510.4 557 46.9
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 2.5e-140 503.4 548 49.1
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 5.6e-140 502.3 650 44.8
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 8.9e-138 495.0 477 52.6
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 1.7e-136 490.7 672 42.0
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 1.7e-136 490.7 381 62.2
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 1.1e-135 488.0 534 49.4
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 1.1e-135 488.0 447 52.6
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 1.4e-135 487.6 545 46.8
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 1.3e-133 481.1 532 48.9
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 5.6e-132 475.7 418 59.3
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 6.8e-130 468.8 556 46.2
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 6.8e-130 468.8 575 44.9
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 5.8e-129 465.7 554 46.6
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 9.8e-129 464.9 555 46.7
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 9.8e-129 464.9 555 46.7
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 1.9e-127 460.7 548 45.8
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 3.2e-127 459.9 542 46.1
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 4.1e-127 459.5 416 53.1
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 9.2e-127 458.4 550 45.8
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 4.6e-126 456.1 547 45.3
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.3e-125 454.5 489 50.1
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 3.0e-125 453.4 406 57.6
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 5.0e-125 452.6 554 43.0
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 1.1e-124 451.4 548 46.4
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 1.5e-124 451.1 536 43.7
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 3.3e-124 449.9 386 54.4
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 3.3e-124 449.9 548 46.2
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 4.4e-121 439.5 502 45.8
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.9e-120 436.8 678 40.0
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 1.4e-119 434.5 453 50.1
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 1.9e-119 434.1 556 43.3
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.4e-114 417.9 410 53.7
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 7.6e-113 412.1 539 43.4
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 4.9e-112 409.5 472 45.8
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 8.4e-112 408.7 426 50.5
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 6.0e-110 402.5 333 58.6
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 3.1e-106 390.2 524 44.5
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 4.4e-105 386.3 492 43.3
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 7.6e-105 385.6 332 54.8
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.0e-97 360.9 286 57.0
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 1.3e-96 358.2 499 42.1
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 3.9e-93 346.7 511 39.5
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 5.6e-92 342.8 348 51.7
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 5.6e-92 342.8 462 42.4
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 1.3e-83 315.1 363 50.1
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.4e-82 311.6 258 55.8
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 2.5e-76 290.8 293 51.5
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 2.8e-75 287.3 236 56.8
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.0e-52 211.5 282 45.7
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 7.5e-44 183.0 280 43.9
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 8.8e-37 159.5 145 57.9
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.7e-35 155.2 145 59.3
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.1e-34 152.5 144 58.3
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 2.7e-33 147.9 141 57.4
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 9.5e-31 139.4 294 31.0
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 8.8e-29 132.9 179 43.6
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 1.3e-24 119.0 145 49.7
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 7.5e-20 103.2 275 26.5
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.8e-13 82.0 60 60.0
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 1.5e-12 79.0 93 46.2
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 2.6e-12 78.2 75 53.3
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 1.1e-07 62.8 42 66.7
Lalb_Chr10g0092301 Lupinus albus HOM05D002617 ORTHO05D009035 1.9e-07 62.0 54 50.0
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 4.3e-07 60.8 47 66.0


User provided reference genes

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