Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 2.8e-260 901.4 441 100.0
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 5.7e-152 541.6 460 62.2
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 2.2e-140 503.1 412 64.8
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 3.5e-117 426.0 472 50.2
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 2.9e-111 406.4 478 45.8
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 2.4e-110 403.3 440 52.5
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 1.2e-109 401.0 476 46.8
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 7.3e-107 391.7 464 44.4
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 2.1e-106 390.2 470 45.3
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 2.1e-106 390.2 419 50.4
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 2.3e-105 386.7 464 44.4
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 3.1e-105 386.3 445 48.5
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 3.1e-105 386.3 460 45.2
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 4.0e-105 386.0 439 46.9
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 1.7e-103 380.6 459 45.3
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 1.4e-102 377.5 448 45.3
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 6.0e-101 372.1 462 46.3
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 1.0e-100 371.3 457 45.5
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.1e-99 367.9 457 45.3
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 1.9e-99 367.1 456 43.0
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 2.5e-99 366.7 454 45.8
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 4.3e-99 365.9 454 44.9
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 1.2e-98 364.4 455 42.6
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 3.6e-98 362.8 460 41.7
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 6.2e-98 362.1 454 45.6
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 1.1e-97 361.3 461 41.9
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 1.8e-97 360.5 450 44.9
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 6.8e-97 358.6 462 42.9
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 3.4e-96 356.3 438 43.4
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.8e-96 355.5 457 44.9
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 1.7e-95 354.0 451 44.1
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 2.9e-95 353.2 458 43.7
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 3.7e-95 352.8 414 46.1
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 8.3e-95 351.7 437 46.7
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 4.1e-94 349.4 417 46.5
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 4.1e-94 349.4 417 46.5
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 4.1e-94 349.4 417 46.5
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 4.1e-94 349.4 456 43.9
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 5.4e-94 349.0 408 47.5
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 7.1e-94 348.6 391 47.8
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 3.5e-93 346.3 383 48.0
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 4.6e-93 345.9 410 46.1
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 4.6e-93 345.9 407 46.7
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 6.0e-93 345.5 450 44.9
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 1.3e-92 344.4 410 45.9
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 1.3e-92 344.4 518 40.0
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 3.0e-92 343.2 450 44.4
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 7.3e-91 338.6 471 42.5
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 2.8e-90 336.7 412 46.1
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.8e-90 336.7 432 45.1
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 6.2e-90 335.5 413 44.6
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 8.1e-90 335.1 457 43.1
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 8.1e-90 335.1 432 44.2
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 8.1e-90 335.1 452 43.4
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 1.1e-89 334.7 455 43.1
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 1.4e-89 334.3 457 42.7
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 6.8e-89 332.0 451 42.6
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 8.9e-89 331.6 389 47.8
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.5e-88 330.9 432 44.2
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 2.0e-88 330.5 459 41.4
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.8e-88 328.9 432 43.8
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 5.8e-88 328.9 469 40.5
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.2e-87 327.0 392 45.9
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 1.1e-86 324.7 439 44.2
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 9.3e-86 321.6 458 41.3
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 1.6e-85 320.9 399 44.4
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 3.5e-85 319.7 397 44.3
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 6.0e-85 318.9 450 43.1
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 1.0e-84 318.2 360 48.3
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 1.7e-84 317.4 397 45.8
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 3.0e-84 316.6 387 45.0
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 5.1e-84 315.8 394 45.9
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 1.5e-83 314.3 457 41.1
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.5e-83 314.3 417 42.7
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 5.6e-83 312.4 464 40.7
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 7.3e-83 312.0 460 42.0
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 9.6e-83 311.6 450 41.8
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 2.1e-82 310.5 387 44.2
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 8.1e-82 308.5 360 46.1
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 1.1e-81 308.1 413 42.9
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 1.1e-81 308.1 405 44.7
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 6.9e-81 305.4 463 40.2
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 6.9e-81 305.4 448 41.1
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 3.4e-80 303.1 450 42.4
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 1.3e-79 301.2 273 56.8
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 1.3e-79 301.2 476 39.3
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 4.9e-79 299.3 426 44.1
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 6.4e-79 298.9 453 40.8
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 3.2e-78 296.6 393 44.0
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 4.6e-77 292.7 456 40.1
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 1.9e-75 287.3 410 40.5
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 3.6e-74 283.1 260 56.2
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 2.4e-73 280.4 392 41.1
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 7.6e-72 275.4 439 37.8
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 1.3e-71 274.6 381 42.0
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 1.3e-71 274.6 466 36.9
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 1.2e-69 268.1 379 42.5
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 6.0e-69 265.8 401 40.1
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.3e-68 264.6 359 40.9
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 1.1e-67 261.5 453 36.0
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 9.6e-67 258.5 315 46.7
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.3e-66 258.1 397 41.1
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 9.0e-65 251.9 265 53.2
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 1.5e-64 251.1 299 44.8
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 1.3e-63 248.1 242 55.8
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 5.5e-62 242.7 314 47.8
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 6.0e-61 239.2 382 39.0
Aa31LG1G4780 Aethionema arabicum HOM05D004964 ORTHO05D005918 1.3e-60 238.0 284 47.9
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 1.9e-59 234.2 455 34.5
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 1.7e-55 221.1 304 42.8
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.6e-53 214.5 214 48.6
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 4.8e-50 203.0 402 35.8
Os01g0684800 Oryza sativa ssp. japonica HOM05D004964 ORTHO05D005918 1.3e-47 194.9 209 46.9
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 8.5e-47 192.2 500 29.8
C07p27190 Brassica napus HOM05D004964 ORTHO05D005918 1.1e-43 181.8 264 42.8
BolC7t43246H Brassica oleracea HOM05D004964 ORTHO05D005918 1.1e-43 181.8 264 42.8
Hund12147 Selenicereus undatus HOM05D004964 ORTHO05D005918 4.3e-43 179.9 215 49.3
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 2.8e-42 177.2 413 31.0
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 3.1e-41 173.7 171 48.5
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 3.2e-38 163.7 224 45.5
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 2.6e-35 154.1 209 45.0
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 4.4e-35 153.3 277 36.8
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 1.3e-34 151.8 470 28.7
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 1.2e-32 145.2 260 38.8
CDE04G2937 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 2.6e-32 144.1 186 44.6
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 8.5e-31 139.0 217 35.9
SGA_v2.0_scaffold26G11248 Striga asiatica HOM05D004964 ORTHO05D005918 9.4e-30 135.6 201 39.3
SMO146G0189 Selaginella moellendorffii HOM05D004964 ORTHO05D005918 2.1e-29 134.4 371 31.3
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 2.0e-27 127.9 163 39.9
MD12G1248600 Malus domestica HOM05D004964 ORTHO05D005918 9.7e-27 125.6 155 48.4
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 2.2e-26 124.4 112 52.7
TPR.G15846 Trifolium pratense HOM05D004964 ORTHO05D005918 8.2e-26 122.5 184 39.7
QL03p030376 Quercus lobata HOM05D004964 ORTHO05D005918 1.1e-25 122.1 130 44.6
Haze_04422 Corylus avellana HOM05D004964 ORTHO05D005918 2.5e-22 110.9 188 42.0
CBR_g718 Chara braunii HOM05D004964 ORTHO05D005918 3.2e-22 110.5 147 41.5
Aa31LG1G4790 Aethionema arabicum HOM05D004964 ORTHO05D005918 4.0e-20 103.6 98 48.0
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 1.3e-15 88.6 146 33.6
BolC9t55571H Brassica oleracea HOM05D004964 ORTHO05D005918 1.7e-15 88.2 164 33.5
SEGI_14565 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 2.2e-15 87.8 167 33.5
BolC9t55572H Brassica oleracea HOM05D004964 ORTHO05D005918 5.5e-14 83.2 125 37.6
TPR.G19618 Trifolium pratense HOM05D004964 ORTHO05D005918 3.6e-13 80.5 95 40.0
Lsat_1_v5_gn_6_73440 Lactuca sativa HOM05D001771 ORTHO05D001876 4.0e-12 77.0 133 39.1
RcHm_v2.0_Chr2g0095691 Rosa chinensis HOM05D004964 ORTHO05D005918 5.2e-12 76.6 64 56.2
CDE04G0768 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 2.4e-09 67.8 98 34.7
SEGI_33500 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 5.4e-09 66.6 98 38.8
arahy.Tifrunner.gnm1.ann1.A28SEL Arachis hypogaea HOM05D000231 ORTHO05D005918 1.6e-08 65.1 63 47.6
MCO01G175 Micromonas commoda HOM05D004964 ORTHO05D005918 1.7e-07 61.6 394 23.4
Psat7g249360 Pisum sativum HOM05D001947 ORTHO05D021361 1.7e-07 61.6 103 38.8
MD12G1248100 Malus domestica HOM05D004964 ORTHO05D005918 1.9e-06 58.2 80 40.0


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