Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 3.8e-84 314.7 148 100.0
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 3.3e-43 178.7 120 67.5
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 2.1e-42 176.0 140 61.4
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 2.8e-42 175.6 97 79.4
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 3.6e-42 175.3 114 70.2
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 8.0e-42 174.1 148 57.4
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 2.3e-41 172.6 90 84.4
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 5.2e-41 171.4 90 82.2
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 6.8e-41 171.0 154 57.8
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 1.2e-40 170.2 151 57.0
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 1.2e-40 170.2 151 57.0
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 1.2e-40 170.2 106 69.8
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 2.0e-40 169.5 99 75.8
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 2.6e-40 169.1 148 59.5
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 2.6e-40 169.1 91 79.1
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 3.4e-40 168.7 125 63.2
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 4.4e-40 168.3 132 61.4
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 4.4e-40 168.3 109 68.8
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 4.4e-40 168.3 114 69.3
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 5.7e-40 167.9 93 77.4
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 5.7e-40 167.9 134 60.4
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 7.5e-40 167.5 125 62.4
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 9.8e-40 167.2 123 63.4
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 9.8e-40 167.2 123 63.4
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 1.3e-39 166.8 144 65.3
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 1.7e-39 166.4 128 60.2
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 1.7e-39 166.4 139 58.3
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 2.2e-39 166.0 111 68.5
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 2.2e-39 166.0 134 60.4
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 2.2e-39 166.0 90 81.1
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 2.8e-39 165.6 108 69.4
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 2.8e-39 165.6 94 76.6
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 3.7e-39 165.2 144 57.6
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 3.7e-39 165.2 106 68.9
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 4.9e-39 164.9 128 62.5
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 6.3e-39 164.5 91 75.8
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 6.3e-39 164.5 112 67.0
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 8.3e-39 164.1 89 78.7
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.4e-38 163.3 96 75.0
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.4e-38 163.3 140 60.7
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 1.8e-38 162.9 138 60.9
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 1.8e-38 162.9 129 59.7
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 1.8e-38 162.9 127 59.8
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 1.8e-38 162.9 90 77.8
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 2.4e-38 162.5 141 60.3
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 3.1e-38 162.2 108 68.5
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 3.1e-38 162.2 81 84.0
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 4.1e-38 161.8 135 59.3
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 5.4e-38 161.4 144 56.9
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 5.4e-38 161.4 117 65.0
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 9.2e-38 160.6 103 68.9
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 9.2e-38 160.6 89 77.5
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 1.2e-37 160.2 92 76.1
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 1.2e-37 160.2 112 66.1
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 1.2e-37 160.2 90 75.6
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 1.2e-37 160.2 90 75.6
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 1.6e-37 159.8 92 76.1
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 2.7e-37 159.1 81 82.7
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 3.5e-37 158.7 90 74.4
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 7.8e-37 157.5 90 77.8
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 7.8e-37 157.5 103 68.0
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 1.0e-36 157.1 102 68.6
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 2.3e-36 156.0 90 75.6
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 2.3e-36 156.0 110 65.5
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 6.6e-36 154.5 90 73.3
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 6.6e-36 154.5 90 73.3
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 6.6e-36 154.5 90 74.4
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 1.1e-35 153.7 142 54.2
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 1.1e-35 153.7 115 62.6
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 4.3e-35 151.8 104 66.3
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 9.5e-35 150.6 81 77.8
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 3.6e-34 148.7 135 55.6
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 8.0e-34 147.5 94 64.9
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 1.8e-33 146.4 86 72.1
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 3.0e-33 145.6 81 75.3
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 5.2e-33 144.8 120 58.3
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 6.8e-33 144.4 165 49.1
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 8.9e-33 144.1 213 40.4
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 1.2e-32 143.7 214 40.2
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 3.4e-32 142.1 72 81.9
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 4.4e-32 141.7 91 64.8
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 1.3e-31 140.2 173 45.1
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 4.1e-30 135.2 112 53.6
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 3.5e-29 132.1 81 69.1
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 7.8e-29 131.0 92 65.2
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 3.6e-26 122.1 84 59.5
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 1.1e-22 110.5 55 83.6
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 1.2e-21 107.1 51 88.2
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 7.8e-21 104.4 51 82.4
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 7.8e-21 104.4 52 84.6
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 1.1e-19 100.5 51 80.4
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 4.0e-17 92.0 90 53.3
MELO3C020311.2 Cucumis melo HOM05D007646 ORTHO05D004022 1.9e-11 73.2 99 44.4
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 3.6e-10 68.9 79 38.0
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 8.1e-10 67.8 34 73.5
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 1.4e-09 67.0 39 76.9
unitig_748.g8495 Utricularia gibba HOM05D007646 ORTHO05D004022 3.1e-09 65.9 92 41.3
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 1.5e-08 63.5 79 40.5
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 1.3e-07 60.5 85 32.9
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 1.7e-07 60.1 83 34.9
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 1.7e-07 60.1 117 30.8
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 2.9e-07 59.3 84 34.5
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 2.9e-07 59.3 87 33.3
Cre13.g605700 Chlamydomonas reinhardtii HOM05D007646 ORTHO05D004022 2.9e-07 59.3 143 28.7
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 2.9e-07 59.3 91 31.9
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 4.9e-07 58.5 83 34.9
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 8.4e-07 57.8 85 34.1
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 8.4e-07 57.8 79 35.4
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 1.1e-06 57.4 91 33.0
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 1.4e-06 57.0 92 30.4
CARHR056450 Cardamine hirsuta HOM05D007710 ORTHO05D004022 1.9e-06 56.6 91 28.6
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 1.9e-06 56.6 88 35.2
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 1.9e-06 56.6 88 31.8
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 1.9e-06 56.6 84 32.1
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 2.4e-06 56.2 83 33.7
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 2.4e-06 56.2 83 33.7
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 2.4e-06 56.2 83 33.7
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 2.4e-06 56.2 83 33.7
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 3.2e-06 55.8 106 33.0
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 3.2e-06 55.8 92 30.4
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 4.2e-06 55.5 86 30.2
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 4.2e-06 55.5 88 30.7
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 5.4e-06 55.1 84 32.1
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 5.4e-06 55.1 83 32.5
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 5.4e-06 55.1 91 29.7
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 5.4e-06 55.1 83 32.5
Aqoxy3G02299 Aquilegia oxysepala HOM05D007710 ORTHO05D004022 7.1e-06 54.7 80 32.5
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 7.1e-06 54.7 84 32.1
TWI32G0404 Tripterygium wilfordii HOM05D007710 ORTHO05D004022 7.1e-06 54.7 79 32.9
TPR.G19627 Trifolium pratense HOM05D007710 ORTHO05D004022 9.2e-06 54.3 83 33.7


User provided reference genes

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