Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 1.6e-255 885.6 446 100.0
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 1.9e-211 739.2 446 83.4
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.1e-210 735.7 446 83.2
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 2.2e-204 715.7 430 81.4
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 1.4e-190 669.8 432 75.5
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 5.2e-177 624.8 431 73.3
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 4.8e-175 618.2 422 73.2
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 5.3e-174 614.8 436 72.5
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 1.2e-173 613.6 416 74.3
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 1.1e-171 607.1 442 71.0
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 1.2e-170 603.6 411 74.0
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 1.6e-170 603.2 411 74.0
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 2.7e-170 602.4 411 72.7
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 6.1e-170 601.3 405 73.8
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 3.0e-169 599.0 429 70.6
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 8.8e-169 597.4 424 70.3
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 1.5e-168 596.7 404 73.8
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 7.5e-168 594.3 422 70.4
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 1.3e-167 593.6 415 72.3
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.7e-167 593.2 411 72.7
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 4.8e-167 591.7 424 71.2
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 3.1e-166 589.0 430 69.5
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 9.1e-166 587.4 411 72.5
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 1.2e-165 587.0 423 71.2
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 1.2e-165 587.0 421 69.1
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 1.2e-165 587.0 448 66.3
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 1.2e-165 587.0 408 71.6
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 2.0e-165 586.3 422 70.9
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 2.0e-165 586.3 422 69.2
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 2.0e-165 586.3 409 71.6
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 2.7e-165 585.9 406 72.4
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 3.5e-165 585.5 419 71.8
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 3.5e-165 585.5 412 71.4
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 3.5e-165 585.5 412 70.9
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 1.3e-164 583.6 405 72.8
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 1.7e-164 583.2 411 72.0
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 3.8e-164 582.0 412 71.8
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 1.1e-163 580.5 408 71.8
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.1e-163 580.5 422 69.9
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.1e-163 580.5 421 71.5
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 1.5e-163 580.1 411 71.0
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 1.5e-163 580.1 410 70.2
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 1.2e-162 577.0 437 68.0
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 1.6e-162 576.6 408 70.8
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 1.6e-162 576.6 428 70.1
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 3.6e-162 575.5 403 70.7
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 4.7e-162 575.1 451 66.7
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 6.1e-162 574.7 411 70.8
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 1.8e-161 573.2 434 67.5
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.8e-161 573.2 421 70.5
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 3.0e-161 572.4 408 71.1
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 3.0e-161 572.4 415 69.6
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 3.0e-161 572.4 418 69.1
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.2e-161 571.6 419 70.2
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 1.2e-160 570.5 448 66.7
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 2.6e-160 569.3 402 70.9
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 5.7e-160 568.2 417 68.8
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 3.7e-159 565.5 403 70.7
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 6.3e-159 564.7 421 67.7
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 1.1e-158 563.9 398 71.1
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 3.1e-158 562.4 415 68.4
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 9.2e-158 560.8 437 66.1
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 9.2e-158 560.8 405 68.6
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 1.2e-157 560.5 421 68.6
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 5.9e-157 558.1 404 70.5
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 6.6e-156 554.7 412 68.9
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 1.1e-155 553.9 390 72.1
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 1.5e-155 553.5 388 70.6
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 2.5e-155 552.7 411 67.9
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 9.5e-155 550.8 408 68.4
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 2.1e-154 549.7 411 67.6
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 2.1e-154 549.7 405 68.4
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 4.0e-153 545.4 424 66.3
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 2.6e-152 542.7 380 70.0
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 1.3e-151 540.4 396 67.2
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 1.7e-151 540.0 493 59.0
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 1.1e-150 537.3 399 67.9
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.4e-150 537.0 468 61.3
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 2.4e-150 536.2 423 63.6
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 9.2e-150 534.3 423 64.3
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 1.2e-149 533.9 420 65.5
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 1.7e-148 530.0 404 67.1
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 4.3e-147 525.4 405 67.4
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 2.1e-146 523.1 377 69.2
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 2.1e-146 523.1 401 67.6
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 6.8e-145 518.1 414 64.7
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 6.8e-145 518.1 414 64.7
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 7.5e-144 514.6 354 78.8
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 6.0e-141 505.0 364 72.0
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 1.2e-138 497.3 431 59.4
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 1.2e-136 490.7 397 67.0
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 7.5e-136 488.0 334 76.0
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 1.4e-134 483.8 391 62.7
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 5.4e-134 481.9 403 61.0
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 5.6e-131 471.9 336 73.5
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 1.2e-130 470.7 327 72.2
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 2.8e-130 469.5 394 58.9
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.9e-123 446.8 420 56.2
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 3.1e-121 439.5 314 68.8
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 1.2e-109 401.0 394 56.3
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 5.1e-108 395.6 299 64.5
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.5e-107 394.0 406 53.4
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 8.1e-106 388.3 321 64.8
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.6e-96 356.7 252 73.0
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 4.3e-91 339.3 342 57.3
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 1.1e-86 324.7 391 45.3
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 2.6e-80 303.5 219 66.2
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 4.2e-78 296.2 201 77.6
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 7.2e-78 295.4 385 44.9
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 3.3e-75 286.6 196 77.6
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 4.1e-65 253.1 386 41.2
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.5e-46 191.4 133 72.9
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.2e-45 188.3 120 78.3
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 2.2e-42 177.6 111 79.3
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.6e-38 162.9 117 70.9
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.4e-36 158.3 117 69.2
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.6e-35 154.1 117 67.5
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 4.1e-33 146.7 103 75.7
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 6.0e-32 142.9 103 67.0
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 2.9e-26 124.0 81 74.1
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 2.9e-26 124.0 81 74.1
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.7e-24 117.5 86 65.1
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 3.9e-23 113.6 69 76.8
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 6.2e-21 106.3 69 73.9
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 8.1e-21 105.9 75 61.3
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 3.4e-19 100.5 82 58.5
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 5.4e-17 93.2 102 54.9
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.0e-15 89.0 119 49.6
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 2.3e-15 87.8 104 52.9
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 1.1e-14 85.5 49 75.5
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 2.4e-12 77.8 41 80.5
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 2.0e-11 74.7 51 70.6
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 9.9e-11 72.4 58 58.6


User provided reference genes

Program Settings