Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 5.3e-75 284.3 144 100.0
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 8.6e-57 223.8 147 81.0
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 1.1e-56 223.4 144 79.9
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 8.0e-55 217.2 146 79.5
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 6.0e-50 201.1 158 67.7
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.1e-46 190.3 150 65.3
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 4.0e-46 188.3 149 65.1
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 5.2e-46 188.0 146 66.4
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 6.8e-46 187.6 159 62.9
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 6.8e-46 187.6 158 63.9
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 2.2e-44 182.6 122 71.3
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 2.9e-44 182.2 146 63.7
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 2.9e-44 182.2 146 64.4
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 3.7e-44 181.8 151 60.9
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 8.3e-44 180.6 147 66.7
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.1e-43 180.3 156 62.8
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 1.4e-43 179.9 122 71.3
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 1.9e-43 179.5 159 61.6
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.9e-43 179.5 147 60.5
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 1.9e-43 179.5 149 61.7
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.9e-43 179.5 148 60.1
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 2.4e-43 179.1 152 61.2
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 2.4e-43 179.1 147 61.9
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 4.1e-43 178.3 122 70.5
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 4.1e-43 178.3 153 65.4
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 4.1e-43 178.3 144 61.8
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 4.1e-43 178.3 157 60.5
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 4.1e-43 178.3 146 62.3
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 7.0e-43 177.6 149 63.1
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 7.0e-43 177.6 131 66.4
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 9.2e-43 177.2 121 70.2
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 9.2e-43 177.2 146 63.7
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 1.6e-42 176.4 149 60.4
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.6e-42 176.4 156 57.7
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 2.7e-42 175.6 157 61.8
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 4.6e-42 174.9 162 59.9
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 4.6e-42 174.9 131 65.6
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 4.6e-42 174.9 122 69.7
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 7.8e-42 174.1 160 59.4
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 1.0e-41 173.7 155 60.6
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.7e-41 172.9 145 61.4
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 3.9e-41 171.8 153 60.1
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 3.9e-41 171.8 148 60.8
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 5.0e-41 171.4 122 67.2
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 8.6e-41 170.6 143 61.5
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 8.6e-41 170.6 143 61.5
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 8.6e-41 170.6 158 63.3
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 1.1e-40 170.2 118 67.8
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 1.5e-40 169.9 151 62.3
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 1.5e-40 169.9 151 62.3
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 2.5e-40 169.1 124 66.9
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 2.5e-40 169.1 149 58.4
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 2.5e-40 169.1 152 61.8
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 3.3e-40 168.7 153 60.1
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 3.3e-40 168.7 142 57.0
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 4.3e-40 168.3 152 59.2
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 5.6e-40 167.9 128 64.8
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 7.3e-40 167.5 144 62.5
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 7.3e-40 167.5 136 64.7
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 9.5e-40 167.2 155 56.8
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.2e-39 166.8 131 67.2
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 1.6e-39 166.4 159 61.0
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 2.1e-39 166.0 156 58.3
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 4.7e-39 164.9 129 62.8
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 4.7e-39 164.9 146 58.9
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 4.7e-39 164.9 121 66.1
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 6.2e-39 164.5 152 58.6
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 3.1e-38 162.2 148 60.8
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 3.1e-38 162.2 147 58.5
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 4.0e-38 161.8 179 52.5
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 5.2e-38 161.4 141 58.2
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.2e-37 160.2 169 54.4
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 3.4e-37 158.7 158 57.6
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 4.4e-37 158.3 150 55.3
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.7e-36 156.4 120 65.8
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 2.2e-36 156.0 116 66.4
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 2.9e-36 155.6 117 64.1
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 3.7e-36 155.2 120 66.7
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 3.7e-36 155.2 124 59.7
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.4e-35 153.3 120 64.2
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 4.1e-35 151.8 155 52.9
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 7.1e-35 151.0 116 62.9
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 7.1e-35 151.0 125 62.4
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 3.5e-34 148.7 165 51.5
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 3.5e-34 148.7 165 51.5
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 4.6e-34 148.3 165 50.9
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 4.6e-34 148.3 165 50.9
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 6.0e-34 147.9 152 55.9
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 5.1e-33 144.8 155 51.0
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 8.6e-33 144.1 124 57.3
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.1e-32 143.7 138 54.3
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 3.3e-32 142.1 102 66.7
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 7.3e-32 141.0 109 63.3
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 8.1e-31 137.5 87 74.7
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.4e-30 136.7 92 68.5
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 4.0e-30 135.2 118 54.2
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.2e-29 133.7 96 66.7
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.9e-28 129.0 100 61.0
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.9e-28 129.0 107 55.1
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 2.4e-27 125.9 103 61.2
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 3.2e-27 125.6 119 54.6
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 2.1e-26 122.9 111 55.0
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.0e-22 108.6 122 50.0
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 4.2e-19 98.6 86 59.3
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 2.7e-18 95.9 74 60.8
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 4.6e-18 95.1 98 48.0
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 6.4e-12 74.7 79 46.8
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 9.3e-11 70.9 125 33.6
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 6.7e-09 64.7 82 42.7
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.5e-08 63.5 112 33.0
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 4.3e-08 62.0 103 34.0


User provided reference genes

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