Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 3.3e-210 734.9 410 100.0
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 1.1e-146 523.9 396 74.0
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 2.5e-141 506.1 399 66.4
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 2.1e-124 449.9 404 68.6
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 2.6e-119 433.0 397 67.8
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 9.4e-117 424.5 399 62.9
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 2.6e-114 416.4 390 63.6
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 2.7e-111 406.4 415 62.7
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 3.5e-111 406.0 406 62.8
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 7.7e-111 404.8 385 59.5
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 7.7e-111 404.8 392 57.1
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 5.0e-110 402.1 401 63.1
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 5.0e-110 402.1 403 61.8
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 4.2e-109 399.1 410 56.6
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 4.7e-108 395.6 404 62.9
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 6.1e-108 395.2 390 59.5
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 1.4e-107 394.0 395 54.2
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 2.3e-107 393.3 404 63.4
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 8.3e-105 384.8 413 60.0
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 1.4e-104 384.0 411 59.4
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 1.8e-104 383.6 400 61.8
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 2.4e-104 383.3 395 61.8
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 1.2e-103 380.9 401 62.8
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 1.6e-103 380.6 409 59.4
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 2.7e-103 379.8 396 61.4
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.0e-102 377.9 420 53.8
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 5.0e-102 375.6 417 56.6
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 5.0e-102 375.6 413 57.1
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 1.1e-101 374.4 402 63.9
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 2.5e-101 373.2 415 57.3
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 3.6e-100 369.4 409 55.5
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 6.1e-100 368.6 417 59.0
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 4.0e-99 365.9 390 53.8
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 4.0e-99 365.9 403 53.8
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 1.7e-97 360.5 393 58.8
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 1.8e-96 357.1 390 59.2
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 5.4e-96 355.5 390 58.2
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 6.6e-94 348.6 414 58.0
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 3.3e-93 346.3 412 56.6
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 2.8e-92 343.2 390 56.2
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 1.0e-91 341.3 433 56.1
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 5.2e-91 339.0 395 52.4
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 8.9e-91 338.2 390 51.3
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 1.7e-89 334.0 437 46.9
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 8.3e-89 331.6 416 53.6
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 7.0e-88 328.6 405 55.1
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 3.0e-86 323.2 403 51.4
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 6.6e-86 322.0 399 47.6
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 8.6e-86 321.6 407 46.9
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 4.3e-85 319.3 413 55.2
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 7.3e-85 318.5 397 50.1
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 1.2e-84 317.8 390 57.4
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 3.6e-84 316.2 399 57.4
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 4.7e-84 315.8 421 51.8
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 1.3e-81 307.8 415 45.8
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 2.9e-81 306.6 398 56.5
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 2.4e-80 303.5 390 55.9
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 5.4e-80 302.4 396 50.8
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 5.4e-80 302.4 399 45.1
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 6.8e-75 285.4 399 48.1
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 1.7e-73 280.8 402 50.2
AUR62023195 Chenopodium quinoa HOM05D004237 ORTHO05D005002 1.4e-72 277.7 324 54.9
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 5.1e-70 269.2 400 44.0
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 8.6e-70 268.5 391 50.4
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 4.3e-69 266.2 392 52.0
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 4.3e-69 266.2 392 52.0
Peaxi162Scf00003g00001 Petunia axillaris HOM05D004237 ORTHO05D005002 2.8e-68 263.5 321 57.6
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.7e-65 254.2 327 54.7
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 2.4e-59 233.8 229 55.5
Lj2P435T33 Lonicera japonica HOM05D004237 ORTHO05D005002 2.3e-54 217.2 265 60.4
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 5.3e-51 206.1 479 40.5
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 3.4e-50 203.4 407 36.9
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 3.4e-50 203.4 454 41.2
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 1.7e-49 201.1 285 43.5
Glyma.14G069000 Glycine max HOM05D004237 ORTHO05D005002 1.3e-46 191.4 319 48.9
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 9.0e-43 178.7 274 43.4
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 2.6e-42 177.2 448 39.3
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.0e-41 175.3 278 41.4
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 2.2e-41 174.1 424 39.2
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 4.9e-41 172.9 267 40.8
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 8.4e-41 172.2 260 43.1
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 1.9e-40 171.0 259 40.9
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 1.9e-40 171.0 272 41.9
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 2.5e-40 170.6 261 42.1
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 3.2e-40 170.2 257 41.2
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 3.2e-40 170.2 261 42.1
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 5.5e-40 169.5 277 40.1
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 9.3e-40 168.7 269 39.8
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 9.3e-40 168.7 267 40.4
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 1.2e-39 168.3 276 39.5
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 2.1e-39 167.5 258 41.1
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 2.7e-39 167.2 269 39.8
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 4.6e-39 166.4 272 40.4
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 4.6e-39 166.4 401 34.2
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 4.6e-39 166.4 270 40.0
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 7.9e-39 165.6 264 39.4
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 7.9e-39 165.6 261 42.1
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 1.0e-38 165.2 258 41.1
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 1.8e-38 164.5 257 41.6
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 2.3e-38 164.1 150 54.7
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 3.9e-38 163.3 257 41.2
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 3.9e-38 163.3 272 39.0
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 5.1e-38 162.9 259 39.8
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.1e-37 161.8 257 41.2
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 1.1e-37 161.8 130 60.0
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 1.5e-37 161.4 271 39.1
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 1.5e-37 161.4 272 39.0
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 3.3e-37 160.2 244 44.3
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 4.3e-37 159.8 260 39.2
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 7.4e-37 159.1 278 38.5
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 7.4e-37 159.1 231 42.4
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 1.3e-36 158.3 269 38.7
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 2.1e-36 157.5 259 40.9
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 2.1e-36 157.5 265 37.0
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 2.8e-36 157.1 115 60.9
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 3.7e-36 156.8 411 34.1
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 4.8e-36 156.4 192 47.4
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 4.8e-36 156.4 192 47.4
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 6.3e-36 156.0 119 60.5
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 6.3e-36 156.0 437 36.2
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 1.1e-35 155.2 448 39.1
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 1.1e-35 155.2 212 41.5
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 2.4e-35 154.1 281 37.7
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 3.1e-35 153.7 450 34.7
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 3.1e-35 153.7 450 34.7
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 3.1e-35 153.7 422 37.7
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 4.1e-35 153.3 453 35.5
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 4.1e-35 153.3 308 38.0
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 5.3e-35 152.9 179 46.9
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 5.3e-35 152.9 449 32.7
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 1.2e-34 151.8 123 55.3
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 1.2e-34 151.8 123 55.3
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 2.6e-34 150.6 273 38.8
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 2.6e-34 150.6 230 38.7
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 2.6e-34 150.6 441 34.9
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 3.4e-34 150.2 267 36.7
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 5.9e-34 149.4 242 40.5
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 7.6e-34 149.1 436 36.0
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 1.7e-33 147.9 428 35.5
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.7e-33 147.9 260 38.5
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.7e-33 147.9 260 38.5
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 1.7e-33 147.9 98 76.5
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 2.2e-33 147.5 421 39.4
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 6.5e-33 146.0 399 36.1
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 8.4e-33 145.6 432 36.1
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 1.9e-32 144.4 121 54.5
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 1.9e-32 144.4 275 36.0
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 5.5e-32 142.9 247 39.7
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 7.2e-32 142.5 249 39.0
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 1.2e-31 141.7 437 36.2
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 1.6e-31 141.4 249 40.2
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 4.6e-31 139.8 239 37.2
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 7.9e-31 139.0 166 47.0
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 1.3e-30 138.3 227 42.7
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 3.9e-30 136.7 458 35.6
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 5.7e-29 132.9 210 41.4
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 1.7e-25 121.3 439 35.8
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 2.5e-21 107.5 183 42.6
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 1.9e-16 91.3 265 30.9
Glyma.08G110600 Glycine max HOM05D004237 ORTHO05D005002 3.2e-08 63.9 210 29.0
Peaxi162Scf00013g03225 Petunia axillaris HOM05D004237 ORTHO05D005002 2.3e-06 57.8 45 64.4
SHI01026 Sapria himalayana HOM05D004237 ORTHO05D005002 5.2e-06 56.6 183 27.9


User provided reference genes

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