Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04485 Beta vulgaris HOM05D008294 ORTHO05D010468 2.6e-98 362.1 185 100.0
AUR62023240 Chenopodium quinoa HOM05D008294 ORTHO05D010468 4.5e-50 201.8 172 69.2
GSVIVG01030864001 Vitis vinifera HOM05D008294 ORTHO05D010468 9.7e-21 104.4 173 42.8
Ah.16g101330 Amaranthus hybridus HOM05D008294 ORTHO05D010468 1.7e-20 103.6 92 58.7
Ciclev10013091m.g Citrus clementina HOM05D008294 ORTHO05D010468 4.8e-20 102.1 159 42.8
Manes.01G115600 Manihot esculenta HOM05D008294 ORTHO05D010468 3.1e-19 99.4 144 38.9
MSTRG.3520 Avicennia marina HOM05D008294 ORTHO05D010468 4.5e-18 95.5 166 42.8
SGA_v2.0_scaffold329G48860 Striga asiatica HOM05D008294 ORTHO05D010468 5.9e-18 95.1 161 42.9
Sc10g0000850 Simmondsia chinensis HOM05D008294 ORTHO05D010468 2.2e-17 93.2 123 45.5
SalBow7G4521 Salvia bowleyana HOM05D008294 ORTHO05D010468 1.1e-16 90.9 162 43.2
Cc07_g08180 Coffea canephora HOM05D008294 ORTHO05D010468 1.9e-16 90.1 139 41.7
Thecc.04G121200 Theobroma cacao HOM05D008294 ORTHO05D010468 2.5e-16 89.7 160 37.5
Potri.004G088300 Populus trichocarpa HOM05D008294 ORTHO05D010468 4.2e-16 89.0 161 35.4
Potri.017G128700 Populus trichocarpa HOM05D008294 ORTHO05D010468 1.6e-15 87.0 160 41.9
MELO3C020292.2 Cucumis melo HOM05D008294 ORTHO05D010468 4.7e-15 85.5 164 40.2
Solyc02g091380.1 Solanum lycopersicum HOM05D008294 ORTHO05D010468 1.4e-14 84.0 125 44.8
Atru.chr13.2285 Acer truncatum HOM05D008294 ORTHO05D010468 2.3e-14 83.2 164 40.2
Oeu054753.1 Olea europaea HOM05D008294 ORTHO05D010468 2.3e-14 83.2 128 45.3
TAR017G0001 Trochodendron aralioides HOM05D008294 ORTHO05D010468 3.0e-14 82.8 161 41.0
Peaxi162Scf00118g00016 Petunia axillaris HOM05D008294 ORTHO05D010468 4.0e-14 82.4 156 38.5
Lalb_Chr04g0251301 Lupinus albus HOM05D008294 ORTHO05D010468 6.8e-14 81.6 161 39.1
Sopen02g036000 Solanum pennellii HOM05D008294 ORTHO05D010468 6.8e-14 81.6 122 43.4
ClCG05G010930 Citrullus lanatus HOM05D008294 ORTHO05D010468 1.2e-13 80.9 161 36.0
QL11p004113 Quercus lobata HOM05D008294 ORTHO05D010468 1.2e-13 80.9 122 44.3
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 1.5e-13 80.5 172 38.4
HanXRQChr14g0439951 Helianthus annuus HOM05D008294 ORTHO05D010468 2.0e-13 80.1 167 37.1
PGSC0003DMG400030645 Solanum tuberosum HOM05D008294 ORTHO05D010468 7.5e-13 78.2 123 42.3
Migut.L00469 Erythranthe guttata HOM05D008294 ORTHO05D010468 9.8e-13 77.8 164 36.6
Gorai.008G058300 Gossypium raimondii HOM05D008294 ORTHO05D010468 1.3e-12 77.4 135 40.7
Lalb_Chr17g0346181 Lupinus albus HOM05D008294 ORTHO05D010468 1.3e-12 77.4 162 35.2
Nn3g18213 Nelumbo nucifera HOM05D008294 ORTHO05D010468 1.3e-12 77.4 181 36.5
CsaV3_3G021650 Cucumis sativus L. HOM05D008294 ORTHO05D010468 2.2e-12 76.6 164 40.2
Cpa.g.sc604.2 Carica papaya HOM05D008294 ORTHO05D010468 3.7e-12 75.9 122 36.9
Sed0009315 Sechium edule HOM05D008294 ORTHO05D010468 6.3e-12 75.1 161 35.4
Sabra17G0107200 Salix brachista HOM05D008294 ORTHO05D010468 8.3e-12 74.7 131 38.2
Nitab4.5_0002366g0040 Nicotiana tabacum HOM05D008294 ORTHO05D010468 1.8e-11 73.6 121 42.1
ECA238G3741 Erigeron canadensis HOM05D008294 ORTHO05D010468 2.4e-11 73.2 137 38.7
Eucgr.F02821 Eucalyptus grandis HOM05D008294 ORTHO05D010468 3.1e-11 72.8 115 40.9
Nitab4.5_0004399g0030 Nicotiana tabacum HOM05D008294 ORTHO05D010468 3.1e-11 72.8 128 38.3
Glyma.14G069300 Glycine max HOM05D008294 ORTHO05D010468 4.1e-11 72.4 152 38.8
Glyma.02G246900 Glycine max HOM05D008294 ORTHO05D010468 5.4e-11 72.0 157 38.9
Nitab4.5_0002248g0070 Nicotiana tabacum HOM05D008294 ORTHO05D010468 5.4e-11 72.0 125 38.4
DCAR_025875 Daucus carota HOM05D008294 ORTHO05D010468 7.0e-11 71.6 162 38.3
Lsat_1_v5_gn_2_81341 Lactuca sativa HOM05D008294 ORTHO05D010468 7.0e-11 71.6 157 36.3
Phvul.008G234000 Phaseolus vulgaris HOM05D008294 ORTHO05D010468 2.0e-10 70.1 150 38.7
arahy.Tifrunner.gnm1.ann1.HG0CBG Arachis hypogaea HOM05D008294 ORTHO05D010468 3.5e-10 69.3 159 35.8
arahy.Tifrunner.gnm1.ann1.RHD4AQ Arachis hypogaea HOM05D008294 ORTHO05D010468 4.5e-10 68.9 159 35.8
Lj1g0007014 Lotus japonicus HOM05D008294 ORTHO05D010468 4.5e-10 68.9 149 37.6
Migut.H00270 Erythranthe guttata HOM05D008294 ORTHO05D010468 5.0e-09 65.5 41 68.3
Prupe.3G159000 Prunus persica HOM05D008294 ORTHO05D010468 5.0e-09 65.5 116 39.7
VMungo0647G1342 Vigna mungo HOM05D008294 ORTHO05D010468 6.5e-09 65.1 149 36.9
Medtr5g079600 Medicago truncatula HOM05D008294 ORTHO05D010468 8.6e-09 64.7 143 35.0
Zm00001eb334540 Zea mays HOM05D008294 ORTHO05D010468 1.0e-06 57.8 99 38.4
Actinidia39806 Actinidia chinensis HOM05D002803 ORTHO05D003089 1.8e-06 57.0 46 54.3
TPR.G9796 Trifolium pratense HOM05D002803 ORTHO05D003089 1.8e-06 57.0 67 38.8
Gohir.D12G055400 Gossypium hirsutum HOM05D008294 ORTHO05D010468 3.0e-06 56.2 145 35.9
PGSC0003DMG400016702 Solanum tuberosum HOM05D008294 ORTHO05D010468 5.2e-06 55.5 120 32.5
AUR62032184 Chenopodium quinoa HOM05D002803 ORTHO05D003089 8.8e-06 54.7 35 60.0
AUR62036944 Chenopodium quinoa HOM05D002803 ORTHO05D003089 8.8e-06 54.7 35 60.0


User provided reference genes

Program Settings