Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 1.6e-118 429.5 218 100.0
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 1.6e-75 286.6 215 70.7
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 6.9e-74 281.2 218 73.4
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 3.6e-67 258.8 201 68.2
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 7.9e-62 241.1 199 64.8
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 6.7e-61 238.0 199 63.8
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 1.5e-60 236.9 209 60.8
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 3.3e-60 235.7 221 59.3
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 4.3e-60 235.3 199 62.3
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 5.6e-60 235.0 221 59.3
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 9.6e-60 234.2 217 62.2
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 1.1e-58 230.7 211 57.3
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 1.1e-58 230.7 218 57.8
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 1.4e-58 230.3 211 58.3
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 1.8e-58 229.9 219 62.1
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 5.3e-58 228.4 219 59.8
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 6.9e-58 228.0 200 59.5
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 6.9e-58 228.0 199 62.3
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 9.0e-58 227.6 217 56.2
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 9.0e-58 227.6 210 60.0
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.2e-57 227.3 211 58.3
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 4.5e-57 225.3 199 61.8
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 5.8e-57 224.9 217 59.0
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 7.6e-57 224.6 199 61.3
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 9.9e-57 224.2 196 62.2
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.3e-56 223.8 197 60.9
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 3.8e-56 222.2 198 60.6
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 3.8e-56 222.2 200 61.0
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 4.9e-56 221.9 179 63.7
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 6.4e-56 221.5 216 57.4
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 8.4e-56 221.1 196 61.7
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 8.4e-56 221.1 200 59.5
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.1e-55 220.7 211 58.8
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 1.9e-55 219.9 197 59.9
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 5.5e-55 218.4 211 55.9
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 5.5e-55 218.4 211 55.9
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 5.5e-55 218.4 198 60.1
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 7.1e-55 218.0 214 55.6
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 9.3e-55 217.6 196 60.2
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.2e-54 217.2 196 61.2
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 1.6e-54 216.9 194 59.8
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 2.1e-54 216.5 196 59.2
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 2.1e-54 216.5 196 59.2
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 2.1e-54 216.5 193 61.1
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 2.7e-54 216.1 201 59.7
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 2.7e-54 216.1 199 58.8
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 3.5e-54 215.7 196 60.2
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 3.5e-54 215.7 216 56.0
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 3.5e-54 215.7 199 59.3
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 4.6e-54 215.3 200 59.0
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 4.6e-54 215.3 193 61.1
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 6.0e-54 214.9 196 59.7
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 7.9e-54 214.5 195 62.1
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 1.0e-53 214.2 199 57.8
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 2.3e-53 213.0 199 57.8
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 3.0e-53 212.6 173 64.7
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 3.0e-53 212.6 216 55.6
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 6.7e-53 211.5 193 59.1
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 8.7e-53 211.1 212 59.0
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 1.9e-52 209.9 196 59.7
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 1.9e-52 209.9 196 59.7
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 1.9e-52 209.9 196 59.7
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 1.9e-52 209.9 196 59.7
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 1.9e-52 209.9 196 59.7
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.5e-52 209.5 209 54.5
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 2.5e-52 209.5 196 58.2
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 4.3e-52 208.8 193 58.5
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 7.4e-52 208.0 212 56.1
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 7.4e-52 208.0 205 55.6
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 9.6e-52 207.6 163 63.8
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.3e-51 207.2 191 58.6
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.6e-51 206.8 158 65.8
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 3.7e-51 205.7 215 57.2
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 6.2e-51 204.9 203 54.7
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 1.1e-50 204.1 197 57.9
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 1.8e-50 203.4 159 64.2
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 4.0e-50 202.2 194 56.7
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 6.9e-50 201.4 159 65.4
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 3.4e-49 199.1 201 55.2
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 8.4e-48 194.5 194 56.7
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.4e-48 194.5 194 56.7
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.4e-47 193.7 187 57.8
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 9.3e-47 191.0 240 48.8
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.6e-46 190.3 201 54.2
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.0e-45 187.6 158 58.9
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.9e-45 185.7 207 52.7
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 5.1e-45 185.3 161 57.8
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.5e-44 183.7 162 59.9
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 9.6e-44 181.0 211 48.3
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 2.8e-43 179.5 171 57.3
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 3.7e-43 179.1 202 52.5
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 3.6e-38 162.5 135 60.7
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.0e-37 161.0 156 53.2
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.3e-37 160.6 203 50.7
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.7e-37 158.3 164 57.3
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.5e-33 147.1 202 43.1
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 5.0e-32 142.1 191 46.6
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 6.7e-29 131.7 161 47.2
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 8.8e-29 131.3 132 50.0
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 3.1e-26 122.9 157 42.0
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 6.9e-26 121.7 82 65.9
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.2e-25 120.9 65 78.5
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 3.7e-19 99.4 133 55.6
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.2e-17 94.4 82 57.3
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 2.7e-14 83.2 67 58.2
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 4.0e-13 79.3 51 64.7
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 4.0e-13 79.3 94 52.1
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 9.7e-12 74.7 74 60.8
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 8.2e-11 71.6 62 56.5
Ah.10g038080 Amaranthus hybridus HOM05D007258 ORTHO05D008852 1.5e-07 60.8 66 54.5
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.5e-07 60.8 84 46.4


User provided reference genes

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